RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 CLN3Q13286 438 aa12.42□□□□□ -0.42
COPB1-208ENST00000532088 NFATC2Q13469 925 aa12.42□□□□□ -0.42
COPB1-208ENST00000532088 NUMA1Q14980 2115 aa12.42□□□□□ -0.42
COPB1-208ENST00000532088 FASTKD3Q14CZ7 662 aaKnown RBP12.42□□□□□ -0.42
COPB1-208ENST00000532088 BRD3Q15059 726 aa12.42□□□□□ -0.42
COPB1-208ENST00000532088 IRF4Q15306 451 aa12.42□□□□□ -0.42
COPB1-208ENST00000532088 CRTC2Q53ET0 693 aaPredicted RBP12.42□□□□□ -0.42
COPB1-208ENST00000532088 PEAR1Q5VY43 1037 aaPredicted RBP12.42□□□□□ -0.42
COPB1-208ENST00000532088 CERS6Q6ZMG9 384 aa12.42□□□□□ -0.42
COPB1-208ENST00000532088 RFLNAQ6ZTI6 216 aa12.42□□□□□ -0.42
COPB1-208ENST00000532088 CEP68Q76N32 757 aa12.42□□□□□ -0.42
COPB1-208ENST00000532088 RABEPKQ7Z6M1 372 aa12.42□□□□□ -0.42
COPB1-208ENST00000532088 ABI3BPQ7Z7G0 1075 aa12.42□□□□□ -0.42
COPB1-208ENST00000532088 CCDC25Q86WR0 208 aa12.42□□□□□ -0.42
COPB1-208ENST00000532088 DCP2Q8IU60 420 aaKnown RBP12.42□□□□□ -0.42
COPB1-208ENST00000532088 ANKMY2Q8IV38 441 aa12.42□□□□□ -0.42
COPB1-208ENST00000532088 PALM2Q8IXS6 379 aa12.42□□□□□ -0.42
COPB1-208ENST00000532088 CNPY4Q8N129 248 aa12.42□□□□□ -0.42
COPB1-208ENST00000532088 OR4L1Q8NH43 312 aa12.42□□□□□ -0.42
COPB1-208ENST00000532088 ZNF398Q8TD17 642 aa12.42□□□□□ -0.42
COPB1-208ENST00000532088 AENQ8WTP8 325 aaKnown RBP12.42□□□□□ -0.42
COPB1-208ENST00000532088 HEXDCQ8WVB3 486 aa12.42□□□□□ -0.42
COPB1-208ENST00000532088 SCAMP4Q969E2 229 aa12.42□□□□□ -0.42
COPB1-208ENST00000532088 CAVIN3Q969G5 261 aa12.42□□□□□ -0.42
COPB1-208ENST00000532088 HDAC10Q969S8 669 aa12.42□□□□□ -0.42
COPB1-208ENST00000532088 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.42□□□□□ -0.42
COPB1-208ENST00000532088 CERS2Q96G23 380 aa12.42□□□□□ -0.42
COPB1-208ENST00000532088 HSPA12BQ96MM6 686 aa12.42□□□□□ -0.42
COPB1-208ENST00000532088 FCRL3Q96P31 734 aaPredicted RBP12.42□□□□□ -0.42
COPB1-208ENST00000532088 TTC1Q99614 292 aa12.42□□□□□ -0.42
COPB1-208ENST00000532088 RIOK2Q9BVS4 552 aaKnown RBP12.42□□□□□ -0.42
COPB1-208ENST00000532088 SPATA16Q9BXB7 569 aa12.42□□□□□ -0.42
COPB1-208ENST00000532088 TEX101Q9BY14 249 aa12.42□□□□□ -0.42
COPB1-208ENST00000532088 CDC42EP4Q9H3Q1 356 aaKnown RBP12.42□□□□□ -0.42
COPB1-208ENST00000532088 EBF2Q9HAK2 575 aa12.42□□□□□ -0.42
COPB1-208ENST00000532088 PLAC1Q9HBJ0 212 aa12.42□□□□□ -0.42
COPB1-208ENST00000532088 LRRC4CQ9HCJ2 640 aa12.42□□□□□ -0.42
COPB1-208ENST00000532088 MOCS1Q9NZB8 636 aa12.42□□□□□ -0.42
COPB1-208ENST00000532088 SUSD2Q9UGT4 822 aa12.42□□□□□ -0.42
COPB1-208ENST00000532088 INVSQ9Y283 1065 aa12.42□□□□□ -0.42
COPB1-208ENST00000532088 SLC30A1Q9Y6M5 507 aa12.42□□□□□ -0.42
COPB1-208ENST00000532088 FANCMQ8IYD8 2048 aa12.42□□□□□ -0.42
COPB1-208ENST00000532088 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.41□□□□□ -0.42
COPB1-208ENST00000532088 CCDC162PA2VCL2 907 aa12.41□□□□□ -0.42
COPB1-208ENST00000532088 CCDC151A5D8V7 595 aa12.41□□□□□ -0.42
COPB1-208ENST00000532088 A6NNZ2 444 aa12.41□□□□□ -0.42
COPB1-208ENST00000532088 PRR5-ARHGAP8B1AHC4 643 aa12.41□□□□□ -0.42
COPB1-208ENST00000532088 RAD51BO15315 384 aa12.41□□□□□ -0.42
COPB1-208ENST00000532088 SLC31A1O15431 190 aa12.41□□□□□ -0.42
COPB1-208ENST00000532088 MAGEC1O60732 1142 aa12.41□□□□□ -0.42
COPB1-208ENST00000532088 VAPBO95292 243 aa12.41□□□□□ -0.42
COPB1-208ENST00000532088 GOT2P00505 430 aaKnown RBP12.41□□□□□ -0.42
COPB1-208ENST00000532088 OGNP20774 298 aaKnown RBP12.41□□□□□ -0.42
COPB1-208ENST00000532088 FOXN2P32314 431 aa12.41□□□□□ -0.42
COPB1-208ENST00000532088 STX2P32856 288 aa12.41□□□□□ -0.42
COPB1-208ENST00000532088 IGFALSP35858 605 aa12.41□□□□□ -0.42
COPB1-208ENST00000532088 GPR1P46091 355 aa12.41□□□□□ -0.42
COPB1-208ENST00000532088 RABIFP47224 123 aa12.41□□□□□ -0.42
COPB1-208ENST00000532088 PMS2P54278 862 aa12.41□□□□□ -0.42
COPB1-208ENST00000532088 KIAA1024LP59773 190 aa12.41□□□□□ -0.42
COPB1-208ENST00000532088 NAB1Q13506 487 aa12.41□□□□□ -0.42
COPB1-208ENST00000532088 SIM2Q14190 667 aaPredicted RBP12.41□□□□□ -0.42
COPB1-208ENST00000532088 ITIH4Q14624 930 aa12.41□□□□□ -0.42
COPB1-208ENST00000532088 PTPRCAPQ14761 206 aa12.41□□□□□ -0.42
COPB1-208ENST00000532088 CHRNA6Q15825 494 aa12.41□□□□□ -0.42
COPB1-208ENST00000532088 FASTKD1Q53R41 847 aaKnown RBP12.41□□□□□ -0.42
COPB1-208ENST00000532088 LYSMD4Q5XG99 296 aa12.41□□□□□ -0.42
COPB1-208ENST00000532088 RAET1GQ6H3X3 334 aa12.41□□□□□ -0.42
COPB1-208ENST00000532088 MRNIPQ6NTE8 343 aa12.41□□□□□ -0.42
COPB1-208ENST00000532088 FAM151BQ6UXP7 276 aa12.41□□□□□ -0.42
COPB1-208ENST00000532088 GCNT7Q6ZNI0 430 aa12.41□□□□□ -0.42
COPB1-208ENST00000532088 KIAA0408Q6ZU52 694 aa12.41□□□□□ -0.42
COPB1-208ENST00000532088 GALNT7Q86SF2 657 aa12.41□□□□□ -0.42
COPB1-208ENST00000532088 CNTN4Q8IWV2 1026 aa12.41□□□□□ -0.42
COPB1-208ENST00000532088 TMEFF1Q8IYR6 380 aa12.41□□□□□ -0.42
COPB1-208ENST00000532088 MFSD2AQ8NA29 543 aa12.41□□□□□ -0.42
COPB1-208ENST00000532088 C1orf216Q8TAB5 229 aa12.41□□□□□ -0.42
COPB1-208ENST00000532088 BTN2A2Q8WVV5 523 aa12.41□□□□□ -0.42
COPB1-208ENST00000532088 COX14Q96I36 57 aa12.41□□□□□ -0.42
COPB1-208ENST00000532088 SERAC1Q96JX3 654 aa12.41□□□□□ -0.42
COPB1-208ENST00000532088 C9orf72Q96LT7 481 aa12.41□□□□□ -0.42
COPB1-208ENST00000532088 TCF12Q99081 682 aa12.41□□□□□ -0.42
COPB1-208ENST00000532088 FAM167BQ9BTA0 163 aa12.41□□□□□ -0.42
COPB1-208ENST00000532088 SEMA4AQ9H3S1 761 aa12.41□□□□□ -0.42
COPB1-208ENST00000532088 ASB8Q9H765 288 aa12.41□□□□□ -0.42
COPB1-208ENST00000532088 MBNL1Q9NR56 388 aaKnown RBP12.41□□□□□ -0.42
COPB1-208ENST00000532088 GPR27Q9NS67 375 aa12.41□□□□□ -0.42
COPB1-208ENST00000532088 NSMCE4AQ9NXX6 385 aa12.41□□□□□ -0.42
COPB1-208ENST00000532088 NINJ2Q9NZG7 142 aa12.41□□□□□ -0.42
COPB1-208ENST00000532088 CD84Q9UIB8 345 aa12.41□□□□□ -0.42
COPB1-208ENST00000532088 FADS2P1A8MWK0 482 aa12.4□□□□□ -0.42
COPB1-208ENST00000532088 TMEM229AB2RXF0 380 aa12.4□□□□□ -0.42
COPB1-208ENST00000532088 GPR89AB7ZAQ6 455 aa12.4□□□□□ -0.42
COPB1-208ENST00000532088 PFDN6O15212 129 aa12.4□□□□□ -0.42
COPB1-208ENST00000532088 ERLIN1O75477 346 aa12.4□□□□□ -0.42
COPB1-208ENST00000532088 IL2RAP01589 272 aa12.4□□□□□ -0.42
COPB1-208ENST00000532088 PCCBP05166 539 aa12.4□□□□□ -0.42
COPB1-208ENST00000532088 FAM153BP0C7A2 387 aa12.4□□□□□ -0.42
COPB1-208ENST00000532088 GPR89BP0CG08 455 aa12.4□□□□□ -0.42
COPB1-208ENST00000532088 KELP23276 732 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms