RNA–Protein interactions for RNA: ENST00000531957.1

ATM-217, Transcript of ATM serine/threonine kinase, humanhuman

TSL 4

Gene ATM, Length 537 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-217ENST00000531957 CHRNB4P30926 498 aa3.07□□□□□ -1.92
ATM-217ENST00000531957 AHRP35869 848 aa3.07□□□□□ -1.92
ATM-217ENST00000531957 CPOXP36551 454 aa3.07□□□□□ -1.92
ATM-217ENST00000531957 APOBEC1P41238 236 aaKnown RBP3.07□□□□□ -1.92
ATM-217ENST00000531957 TBX2Q13207 712 aaPredicted RBP3.07□□□□□ -1.92
ATM-217ENST00000531957 DECR1Q16698 335 aa3.07□□□□□ -1.92
ATM-217ENST00000531957 PRICKLE4Q2TBC4 344 aa3.07□□□□□ -1.92
ATM-217ENST00000531957 CXorf66Q5JRM2 361 aaPredicted RBP3.07□□□□□ -1.92
ATM-217ENST00000531957 ANO5Q75V66 913 aa3.07□□□□□ -1.92
ATM-217ENST00000531957 CACNA2D4Q7Z3S7 1137 aa3.07□□□□□ -1.92
ATM-217ENST00000531957 SMAP1Q8IYB5 467 aaPredicted RBP3.07□□□□□ -1.92
ATM-217ENST00000531957 RBM15BQ8NDT2 890 aaKnown RBP3.07□□□□□ -1.92
ATM-217ENST00000531957 OR14L1PQ8NHC6 308 aa3.07□□□□□ -1.92
ATM-217ENST00000531957 SMARCE1Q969G3 411 aa3.07□□□□□ -1.92
ATM-217ENST00000531957 PSMD1Q99460 953 aa3.07□□□□□ -1.92
ATM-217ENST00000531957 USP44Q9H0E7 712 aa3.07□□□□□ -1.92
ATM-217ENST00000531957 POLG2Q9UHN1 485 aa3.07□□□□□ -1.92
ATM-217ENST00000531957 IGKV3D-20A0A0C4DH25 116 aa3.06□□□□□ -1.92
ATM-217ENST00000531957 FAM237AA0A1B0GTK4 181 aa3.06□□□□□ -1.92
ATM-217ENST00000531957 C1orf226A1L170 272 aa3.06□□□□□ -1.92
ATM-217ENST00000531957 C5orf60A6NFR6 353 aa3.06□□□□□ -1.92
ATM-217ENST00000531957 HS3ST1O14792 307 aa3.06□□□□□ -1.92
ATM-217ENST00000531957 ANKRD28O15084 1053 aa3.06□□□□□ -1.92
ATM-217ENST00000531957 EXTL3O43909 919 aa3.06□□□□□ -1.92
ATM-217ENST00000531957 PCDH7O60245 1069 aa3.06□□□□□ -1.92
ATM-217ENST00000531957 ZNF500O60304 480 aaPredicted RBP3.06□□□□□ -1.92
ATM-217ENST00000531957 NKX2-2O95096 273 aa3.06□□□□□ -1.92
ATM-217ENST00000531957 F9P00740 461 aa3.06□□□□□ -1.92
ATM-217ENST00000531957 COL2A1P02458 1487 aaPredicted RBP3.06□□□□□ -1.92
ATM-217ENST00000531957 PYGLP06737 847 aa3.06□□□□□ -1.92
ATM-217ENST00000531957 CD48P09326 243 aa3.06□□□□□ -1.92
ATM-217ENST00000531957 RNF224P0DH78 156 aa3.06□□□□□ -1.92
ATM-217ENST00000531957 UBA7P41226 1012 aa3.06□□□□□ -1.92
ATM-217ENST00000531957 FASLGP48023 281 aa3.06□□□□□ -1.92
ATM-217ENST00000531957 PIP4K2AP48426 406 aaPredicted RBP3.06□□□□□ -1.92
ATM-217ENST00000531957 ARCN1P48444 511 aaKnown RBP3.06□□□□□ -1.92
ATM-217ENST00000531957 HARS2P49590 506 aaKnown RBP3.06□□□□□ -1.92
ATM-217ENST00000531957 RARSP54136 660 aaKnown RBP3.06□□□□□ -1.92
ATM-217ENST00000531957 EIF3BP55884 814 aaKnown RBP3.06□□□□□ -1.92
ATM-217ENST00000531957 GNB1P62873 340 aa3.06□□□□□ -1.92
ATM-217ENST00000531957 PTP4A2Q12974 167 aa3.06□□□□□ -1.92
ATM-217ENST00000531957 GAGE5Q13069 117 aa3.06□□□□□ -1.92
ATM-217ENST00000531957 GAGE6Q13070 117 aa3.06□□□□□ -1.92
ATM-217ENST00000531957 BAK1Q16611 211 aa3.06□□□□□ -1.92
ATM-217ENST00000531957 TSSK4Q6SA08 328 aa3.06□□□□□ -1.92
ATM-217ENST00000531957 ZNF704Q6ZNC4 412 aaPredicted RBP3.06□□□□□ -1.92
ATM-217ENST00000531957 NOTCH2NLQ7Z3S9 236 aa3.06□□□□□ -1.92
ATM-217ENST00000531957 PIWIL4Q7Z3Z4 852 aaKnown RBP3.06□□□□□ -1.92
ATM-217ENST00000531957 TRPT1Q86TN4 253 aaKnown RBP3.06□□□□□ -1.92
ATM-217ENST00000531957 CNTROBQ8N137 903 aa3.06□□□□□ -1.92
ATM-217ENST00000531957 ESX1Q8N693 406 aa3.06□□□□□ -1.92
ATM-217ENST00000531957 NFKBIDQ8NI38 313 aa3.06□□□□□ -1.92
ATM-217ENST00000531957 THAP6Q8TBB0 222 aa3.06□□□□□ -1.92
ATM-217ENST00000531957 PSPC1Q8WXF1 523 aaKnown RBP3.06□□□□□ -1.92
ATM-217ENST00000531957 ST8SIA4Q92187 359 aa3.06□□□□□ -1.92
ATM-217ENST00000531957 RRNAD1Q96FB5 475 aaKnown RBP3.06□□□□□ -1.92
ATM-217ENST00000531957 SCRN2Q96FV2 425 aa3.06□□□□□ -1.92
ATM-217ENST00000531957 OXNAD1Q96HP4 312 aaPredicted RBP3.06□□□□□ -1.92
ATM-217ENST00000531957 BICC1Q9H694 974 aaKnown RBP3.06□□□□□ -1.92
ATM-217ENST00000531957 PRKRIP1Q9H875 184 aaPredicted RBP3.06□□□□□ -1.92
ATM-217ENST00000531957 BRF2Q9HAW0 419 aa3.06□□□□□ -1.92
ATM-217ENST00000531957 TRPC7Q9HCX4 862 aa3.06□□□□□ -1.92
ATM-217ENST00000531957 ASAH2Q9NR71 780 aa3.06□□□□□ -1.92
ATM-217ENST00000531957 KLHL9Q9P2J3 617 aa3.06□□□□□ -1.92
ATM-217ENST00000531957 HAO1Q9UJM8 370 aa3.06□□□□□ -1.92
ATM-217ENST00000531957 SLC13A4Q9UKG4 626 aa3.06□□□□□ -1.92
ATM-217ENST00000531957 LRRFIP2Q9Y608 721 aaKnown RBP3.06□□□□□ -1.92
ATM-217ENST00000531957 A0A1W2PP11 408 aa3.05□□□□□ -1.92
ATM-217ENST00000531957 OR5K3A6NET4 321 aa3.05□□□□□ -1.92
ATM-217ENST00000531957 HHLA1C9JL84 531 aa3.05□□□□□ -1.92
ATM-217ENST00000531957 FAM90A26D6RGX4 464 aa3.05□□□□□ -1.92
ATM-217ENST00000531957 M0QZ24 198 aa3.05□□□□□ -1.92
ATM-217ENST00000531957 BAG4O95429 457 aaKnown RBP3.05□□□□□ -1.92
ATM-217ENST00000531957 CAVIN2O95810 425 aa3.05□□□□□ -1.92
ATM-217ENST00000531957 PRSS56P0CW18 603 aa3.05□□□□□ -1.92
ATM-217ENST00000531957 MBTD1Q05BQ5 628 aa3.05□□□□□ -1.92
ATM-217ENST00000531957 GRIK2Q13002 908 aa3.05□□□□□ -1.92
ATM-217ENST00000531957 CDC16Q13042 620 aa3.05□□□□□ -1.92
ATM-217ENST00000531957 MAD2L1Q13257 205 aaPredicted RBP3.05□□□□□ -1.92
ATM-217ENST00000531957 CDONQ4KMG0 1287 aa3.05□□□□□ -1.92
ATM-217ENST00000531957 KRTCAP3Q53RY4 240 aa3.05□□□□□ -1.92
ATM-217ENST00000531957 TECRLQ5HYJ1 363 aa3.05□□□□□ -1.92
ATM-217ENST00000531957 ZC2HC1BQ5TFG8 222 aa3.05□□□□□ -1.92
ATM-217ENST00000531957 FAM53AQ6NSI3 398 aaPredicted RBP3.05□□□□□ -1.92
ATM-217ENST00000531957 RBMS3Q6XE24 437 aaKnown RBP3.05□□□□□ -1.92
ATM-217ENST00000531957 ATG9AQ7Z3C6 839 aa3.05□□□□□ -1.92
ATM-217ENST00000531957 HEATR4Q86WZ0 1026 aa3.05□□□□□ -1.92
ATM-217ENST00000531957 APLFQ8IW19 511 aaPredicted RBP3.05□□□□□ -1.92
ATM-217ENST00000531957 MORC4Q8TE76 937 aa3.05□□□□□ -1.92
ATM-217ENST00000531957 PHF21AQ96BD5 680 aa3.05□□□□□ -1.92
ATM-217ENST00000531957 SENP5Q96HI0 755 aaPredicted RBP3.05□□□□□ -1.92
ATM-217ENST00000531957 LRR1Q96L50 414 aa3.05□□□□□ -1.92
ATM-217ENST00000531957 ZNF599Q96NL3 588 aa3.05□□□□□ -1.92
ATM-217ENST00000531957 TCP11L1Q9NUJ3 509 aa3.05□□□□□ -1.92
ATM-217ENST00000531957 JRKLQ9Y4A0 524 aa3.05□□□□□ -1.92
ATM-217ENST00000531957 CYP46A1Q9Y6A2 500 aa3.05□□□□□ -1.92
ATM-217ENST00000531957 TP53BP1Q12888 1972 aaPredicted RBP3.05□□□□□ -1.92
ATM-217ENST00000531957 NPHP1O15259 732 aa3.04□□□□□ -1.92
ATM-217ENST00000531957 KCNN4O15554 427 aa3.04□□□□□ -1.92
ATM-217ENST00000531957 SYNCRIPO60506 623 aaKnown RBP3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms