RNA–Protein interactions for RNA: ENST00000531741.1

VPS26B-206, Transcript of VPS26, retromer complex component B, humanhuman

TSL 2

Gene VPS26B, Length 2,073 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-206ENST00000531741 CSPG5O95196 566 aa16.73■□□□□ 0.27
VPS26B-206ENST00000531741 TSPAN12O95859 305 aa16.73■□□□□ 0.27
VPS26B-206ENST00000531741 LINC00032P0C843 101 aa16.73■□□□□ 0.27
VPS26B-206ENST00000531741 UROSP10746 265 aa16.73■□□□□ 0.27
VPS26B-206ENST00000531741 PKMP14618 531 aaKnown RBP16.73■□□□□ 0.27
VPS26B-206ENST00000531741 SLC6A2P23975 617 aa16.73■□□□□ 0.27
VPS26B-206ENST00000531741 GRIA3P42263 894 aa16.73■□□□□ 0.27
VPS26B-206ENST00000531741 RCAN2Q14206 197 aa16.73■□□□□ 0.27
VPS26B-206ENST00000531741 INPP5AQ14642 412 aa16.73■□□□□ 0.27
VPS26B-206ENST00000531741 RPS6KA2Q15349 733 aa16.73■□□□□ 0.27
VPS26B-206ENST00000531741 CYTH1Q15438 398 aa16.73■□□□□ 0.27
VPS26B-206ENST00000531741 NRF1Q16656 503 aa16.73■□□□□ 0.27
VPS26B-206ENST00000531741 PTPRNQ16849 979 aa16.73■□□□□ 0.27
VPS26B-206ENST00000531741 SLC5A9Q2M3M2 681 aa16.73■□□□□ 0.27
VPS26B-206ENST00000531741 GIPC2Q8TF65 315 aa16.73■□□□□ 0.27
VPS26B-206ENST00000531741 CANT1Q8WVQ1 401 aa16.73■□□□□ 0.27
VPS26B-206ENST00000531741 SLC45A3Q96JT2 553 aa16.73■□□□□ 0.27
VPS26B-206ENST00000531741 TMEM175Q9BSA9 504 aa16.73■□□□□ 0.27
VPS26B-206ENST00000531741 SPON2Q9BUD6 331 aa16.73■□□□□ 0.27
VPS26B-206ENST00000531741 ADGRE3Q9BY15 652 aa16.73■□□□□ 0.27
VPS26B-206ENST00000531741 BRINP2Q9C0B6 783 aa16.73■□□□□ 0.27
VPS26B-206ENST00000531741 AIG1Q9NVV5 245 aa16.73■□□□□ 0.27
VPS26B-206ENST00000531741 AGO1Q9UL18 857 aaKnown RBP16.73■□□□□ 0.27
VPS26B-206ENST00000531741 RNF11Q9Y3C5 154 aa16.73■□□□□ 0.27
VPS26B-206ENST00000531741 PCDHA9Q9Y5H5 950 aa16.73■□□□□ 0.27
VPS26B-206ENST00000531741 A0A1W2PP18 115 aa16.73■□□□□ 0.27
VPS26B-206ENST00000531741 TYW5A2RUC4 315 aaKnown RBP16.73■□□□□ 0.27
VPS26B-206ENST00000531741 CDC7O00311 574 aa16.73■□□□□ 0.27
VPS26B-206ENST00000531741 OR6B1O95007 311 aa16.73■□□□□ 0.27
VPS26B-206ENST00000531741 CHEK2O96017 543 aa16.73■□□□□ 0.27
VPS26B-206ENST00000531741 ALDH1A1P00352 501 aa16.73■□□□□ 0.27
VPS26B-206ENST00000531741 CYBBP04839 570 aa16.73■□□□□ 0.27
VPS26B-206ENST00000531741 RPS24P62847 133 aaKnown RBP16.73■□□□□ 0.27
VPS26B-206ENST00000531741 NADK2Q4G0N4 442 aa16.73■□□□□ 0.27
VPS26B-206ENST00000531741 INTS11Q5TA45 600 aaKnown RBP16.73■□□□□ 0.27
VPS26B-206ENST00000531741 IYDQ6PHW0 289 aa16.73■□□□□ 0.27
VPS26B-206ENST00000531741 KCNJ9Q92806 393 aa16.73■□□□□ 0.27
VPS26B-206ENST00000531741 LRCH3Q96II8 777 aa16.73■□□□□ 0.27
VPS26B-206ENST00000531741 TTPALQ9BTX7 342 aa16.73■□□□□ 0.27
VPS26B-206ENST00000531741 ANKRD60Q9BZ19 345 aa16.73■□□□□ 0.27
VPS26B-206ENST00000531741 NOL11Q9H8H0 719 aaKnown RBP16.73■□□□□ 0.27
VPS26B-206ENST00000531741 SEMA4BQ9NPR2 832 aaPredicted RBP16.73■□□□□ 0.27
VPS26B-206ENST00000531741 CMTM6Q9NX76 183 aa16.73■□□□□ 0.27
VPS26B-206ENST00000531741 GIMAP2Q9UG22 337 aa16.73■□□□□ 0.27
VPS26B-206ENST00000531741 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.72■□□□□ 0.27
VPS26B-206ENST00000531741 A0A1B0GTL3 188 aa16.72■□□□□ 0.27
VPS26B-206ENST00000531741 A0A1B0GVM2 712 aa16.72■□□□□ 0.27
VPS26B-206ENST00000531741 ZNF839A8K0R7 811 aa16.72■□□□□ 0.27
VPS26B-206ENST00000531741 BTN3A1O00481 513 aa16.72■□□□□ 0.27
VPS26B-206ENST00000531741 CRCPO75575 148 aa16.72■□□□□ 0.27
VPS26B-206ENST00000531741 ZNF177Q13360 481 aaPredicted RBP16.72■□□□□ 0.27
VPS26B-206ENST00000531741 AARS2Q5JTZ9 985 aaKnown RBP16.72■□□□□ 0.27
VPS26B-206ENST00000531741 ZBTB49Q6ZSB9 765 aa16.72■□□□□ 0.27
VPS26B-206ENST00000531741 LRRC8DQ7L1W4 858 aa16.72■□□□□ 0.27
VPS26B-206ENST00000531741 AMIGO2Q86SJ2 522 aa16.72■□□□□ 0.27
VPS26B-206ENST00000531741 MFSD2AQ8NA29 543 aa16.72■□□□□ 0.27
VPS26B-206ENST00000531741 OR56A4Q8NGH8 313 aa16.72■□□□□ 0.27
VPS26B-206ENST00000531741 SLC29A1Q99808 456 aa16.72■□□□□ 0.27
VPS26B-206ENST00000531741 C8orf4Q9NR00 106 aa16.72■□□□□ 0.27
VPS26B-206ENST00000531741 TRMT6Q9UJA5 497 aaKnown RBP16.72■□□□□ 0.27
VPS26B-206ENST00000531741 DMTF1Q9Y222 760 aa16.72■□□□□ 0.27
VPS26B-206ENST00000531741 BTRCQ9Y297 605 aa16.72■□□□□ 0.27
VPS26B-206ENST00000531741 RAI2Q9Y5P3 530 aa16.72■□□□□ 0.27
VPS26B-206ENST00000531741 DHRS12A0PJE2 317 aa16.71■□□□□ 0.27
VPS26B-206ENST00000531741 NPEPPSL1A6NEC2 478 aa16.71■□□□□ 0.27
VPS26B-206ENST00000531741 ANKRD66B4E2M5 251 aa16.71■□□□□ 0.27
VPS26B-206ENST00000531741 RHOCP08134 193 aa16.71■□□□□ 0.27
VPS26B-206ENST00000531741 SELPP16109 830 aa16.71■□□□□ 0.27
VPS26B-206ENST00000531741 CAP1Q01518 475 aa16.71■□□□□ 0.27
VPS26B-206ENST00000531741 MAP7Q14244 749 aa16.71■□□□□ 0.27
VPS26B-206ENST00000531741 PDCD4Q53EL6 469 aaKnown RBP16.71■□□□□ 0.27
VPS26B-206ENST00000531741 NHSL2Q5HYW2 709 aa16.71■□□□□ 0.27
VPS26B-206ENST00000531741 PITRM1Q5JRX3 1037 aa16.71■□□□□ 0.27
VPS26B-206ENST00000531741 HECTD3Q5T447 861 aa16.71■□□□□ 0.27
VPS26B-206ENST00000531741 RBM44Q6ZP01 1051 aaKnown RBP16.71■□□□□ 0.27
VPS26B-206ENST00000531741 SYVN1Q86TM6 617 aa16.71■□□□□ 0.27
VPS26B-206ENST00000531741 PTRH1Q86Y79 214 aaKnown RBP16.71■□□□□ 0.27
VPS26B-206ENST00000531741 PPWD1Q96BP3 646 aaKnown RBP16.71■□□□□ 0.27
VPS26B-206ENST00000531741 CIB1Q99828 191 aa16.71■□□□□ 0.27
VPS26B-206ENST00000531741 HAUS8Q9BT25 410 aa16.71■□□□□ 0.27
VPS26B-206ENST00000531741 NMRK2Q9NPI5 230 aa16.71■□□□□ 0.27
VPS26B-206ENST00000531741 AGPAT4Q9NRZ5 378 aa16.71■□□□□ 0.27
VPS26B-206ENST00000531741 PNPLA3Q9NST1 481 aa16.71■□□□□ 0.27
VPS26B-206ENST00000531741 ZNF225Q9UK10 706 aa16.71■□□□□ 0.27
VPS26B-206ENST00000531741 ZNF840PA6NDX5 716 aa16.71■□□□□ 0.27
VPS26B-206ENST00000531741 GRXCR2A6NFK2 248 aa16.71■□□□□ 0.27
VPS26B-206ENST00000531741 HTRA2O43464 458 aaPredicted RBP16.71■□□□□ 0.27
VPS26B-206ENST00000531741 EEDO75530 441 aaKnown RBP16.71■□□□□ 0.27
VPS26B-206ENST00000531741 TIPRLO75663 272 aa16.71■□□□□ 0.27
VPS26B-206ENST00000531741 H6PDO95479 791 aa16.71■□□□□ 0.27
VPS26B-206ENST00000531741 NPPAP01160 153 aa16.71■□□□□ 0.27
VPS26B-206ENST00000531741 GALTP07902 379 aa16.71■□□□□ 0.27
VPS26B-206ENST00000531741 PSMA4P25789 261 aaKnown RBP16.71■□□□□ 0.27
VPS26B-206ENST00000531741 ZFP36L2P47974 494 aaKnown RBP16.71■□□□□ 0.27
VPS26B-206ENST00000531741 TUFMP49411 452 aaKnown RBP16.71■□□□□ 0.27
VPS26B-206ENST00000531741 NME5P56597 212 aa16.71■□□□□ 0.27
VPS26B-206ENST00000531741 IL2P60568 153 aa16.71■□□□□ 0.27
VPS26B-206ENST00000531741 PRKCQQ04759 706 aa16.71■□□□□ 0.27
VPS26B-206ENST00000531741 CTSL3PQ5NE16 218 aa16.71■□□□□ 0.27
VPS26B-206ENST00000531741 SLC8B1Q6J4K2 584 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms