RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 COG8Q96MW5 612 aa3.93□□□□□ -1.78
PTPRK-220ENST00000531466 FAM110AQ9BQ89 295 aa3.93□□□□□ -1.78
PTPRK-220ENST00000531466 C20orf141Q9NUB4 165 aa3.93□□□□□ -1.78
PTPRK-220ENST00000531466 TERF2IPQ9NYB0 399 aa3.93□□□□□ -1.78
PTPRK-220ENST00000531466 KLHL8Q9P2G9 620 aaPredicted RBP3.93□□□□□ -1.78
PTPRK-220ENST00000531466 KCNJ14Q9UNX9 436 aa3.93□□□□□ -1.78
PTPRK-220ENST00000531466 STK36Q9NRP7 1315 aa3.93□□□□□ -1.78
PTPRK-220ENST00000531466 FASLGP48023 281 aa3.92□□□□□ -1.78
PTPRK-220ENST00000531466 BMXP51813 675 aa3.92□□□□□ -1.78
PTPRK-220ENST00000531466 RHBDL3P58872 404 aa3.92□□□□□ -1.78
PTPRK-220ENST00000531466 PRKG1Q13976 671 aa3.92□□□□□ -1.78
PTPRK-220ENST00000531466 RNPS1Q15287 305 aaKnown RBP3.92□□□□□ -1.78
PTPRK-220ENST00000531466 ADCK5Q3MIX3 580 aa3.92□□□□□ -1.78
PTPRK-220ENST00000531466 TMEM81Q6P7N7 255 aa3.92□□□□□ -1.78
PTPRK-220ENST00000531466 CCDC174Q6PII3 467 aa3.92□□□□□ -1.78
PTPRK-220ENST00000531466 MFSD6Q6ZSS7 791 aa3.92□□□□□ -1.78
PTPRK-220ENST00000531466 PLEKHM3Q6ZWE6 761 aa3.92□□□□□ -1.78
PTPRK-220ENST00000531466 TMTC2Q8N394 836 aa3.92□□□□□ -1.78
PTPRK-220ENST00000531466 FBXL16Q8N461 479 aa3.92□□□□□ -1.78
PTPRK-220ENST00000531466 MORC4Q8TE76 937 aa3.92□□□□□ -1.78
PTPRK-220ENST00000531466 SLC39A13Q96H72 371 aa3.92□□□□□ -1.78
PTPRK-220ENST00000531466 ABHD8Q96I13 439 aa3.92□□□□□ -1.78
PTPRK-220ENST00000531466 SLC41A2Q96JW4 573 aa3.92□□□□□ -1.78
PTPRK-220ENST00000531466 PHF7Q9BWX1 381 aaPredicted RBP3.92□□□□□ -1.78
PTPRK-220ENST00000531466 LRMDAQ9H2I8 198 aa3.92□□□□□ -1.78
PTPRK-220ENST00000531466 TTYH1Q9H313 450 aaPredicted RBP3.92□□□□□ -1.78
PTPRK-220ENST00000531466 TCP11L1Q9NUJ3 509 aa3.92□□□□□ -1.78
PTPRK-220ENST00000531466 FBXL2Q9UKC9 423 aa3.92□□□□□ -1.78
PTPRK-220ENST00000531466 TYMPP19971 482 aa3.91□□□□□ -1.78
PTPRK-220ENST00000531466 CALRP27797 417 aaKnown RBP3.91□□□□□ -1.78
PTPRK-220ENST00000531466 NR2C2P49116 596 aa3.91□□□□□ -1.78
PTPRK-220ENST00000531466 CLDN20P56880 219 aa3.91□□□□□ -1.78
PTPRK-220ENST00000531466 OS9Q13438 667 aaPredicted RBP3.91□□□□□ -1.78
PTPRK-220ENST00000531466 BIRC2Q13490 618 aa3.91□□□□□ -1.78
PTPRK-220ENST00000531466 TDGQ13569 410 aa3.91□□□□□ -1.78
PTPRK-220ENST00000531466 ACVR2BQ13705 512 aa3.91□□□□□ -1.78
PTPRK-220ENST00000531466 TUBB8Q3ZCM7 444 aa3.91□□□□□ -1.78
PTPRK-220ENST00000531466 KRTCAP3Q53RY4 240 aa3.91□□□□□ -1.78
PTPRK-220ENST00000531466 XKR6Q5GH73 641 aa3.91□□□□□ -1.78
PTPRK-220ENST00000531466 C18orf63Q68DL7 685 aa3.91□□□□□ -1.78
PTPRK-220ENST00000531466 TXNDC8Q6A555 127 aa3.91□□□□□ -1.78
PTPRK-220ENST00000531466 ZNF613Q6PF04 617 aa3.91□□□□□ -1.78
PTPRK-220ENST00000531466 PQLC2Q6ZP29 291 aa3.91□□□□□ -1.78
PTPRK-220ENST00000531466 NRROSQ86YC3 692 aa3.91□□□□□ -1.78
PTPRK-220ENST00000531466 SUGP1Q8IWZ8 645 aaKnown RBP3.91□□□□□ -1.78
PTPRK-220ENST00000531466 TNIP2Q8NFZ5 429 aa3.91□□□□□ -1.78
PTPRK-220ENST00000531466 THAP6Q8TBB0 222 aa3.91□□□□□ -1.78
PTPRK-220ENST00000531466 ELP4Q96EB1 424 aa3.91□□□□□ -1.78
PTPRK-220ENST00000531466 ZSCAN31Q96LW9 406 aaPredicted RBP3.91□□□□□ -1.78
PTPRK-220ENST00000531466 IFIH1Q9BYX4 1025 aaKnown RBP3.91□□□□□ -1.78
PTPRK-220ENST00000531466 ZBTB20Q9HC78 741 aaPredicted RBP3.91□□□□□ -1.78
PTPRK-220ENST00000531466 ATAD3AQ9NVI7 634 aa3.91□□□□□ -1.78
PTPRK-220ENST00000531466 HSPB7Q9UBY9 170 aa3.91□□□□□ -1.78
PTPRK-220ENST00000531466 ADAMTS9Q9P2N4 1935 aa3.9□□□□□ -1.78
PTPRK-220ENST00000531466 OR5K3A6NET4 321 aa3.9□□□□□ -1.79
PTPRK-220ENST00000531466 C5orf60A6NFR6 353 aa3.9□□□□□ -1.79
PTPRK-220ENST00000531466 A8MU10 97 aa3.9□□□□□ -1.79
PTPRK-220ENST00000531466 VCYO14598 125 aa3.9□□□□□ -1.79
PTPRK-220ENST00000531466 PEX14O75381 377 aa3.9□□□□□ -1.79
PTPRK-220ENST00000531466 EIF3JO75822 258 aaKnown RBP3.9□□□□□ -1.79
PTPRK-220ENST00000531466 PDE9AO76083 593 aa3.9□□□□□ -1.79
PTPRK-220ENST00000531466 URODP06132 367 aa3.9□□□□□ -1.79
PTPRK-220ENST00000531466 TPOP07202 933 aa3.9□□□□□ -1.79
PTPRK-220ENST00000531466 IGHV4-38-2P0DP08 117 aa3.9□□□□□ -1.79
PTPRK-220ENST00000531466 PRG2P13727 222 aa3.9□□□□□ -1.79
PTPRK-220ENST00000531466 GNAZP19086 355 aa3.9□□□□□ -1.79
PTPRK-220ENST00000531466 SHC1P29353 583 aa3.9□□□□□ -1.79
PTPRK-220ENST00000531466 MLLT10P55197 1068 aa3.9□□□□□ -1.79
PTPRK-220ENST00000531466 SIGIRRQ6IA17 410 aa3.9□□□□□ -1.79
PTPRK-220ENST00000531466 USP38Q8NB14 1042 aa3.9□□□□□ -1.79
PTPRK-220ENST00000531466 TRAPPC12Q8WVT3 735 aa3.9□□□□□ -1.79
PTPRK-220ENST00000531466 GMPPAQ96IJ6 420 aaPredicted RBP3.9□□□□□ -1.79
PTPRK-220ENST00000531466 RPS6KC1Q96S38 1066 aa3.9□□□□□ -1.79
PTPRK-220ENST00000531466 TRPC7Q9HCX4 862 aa3.9□□□□□ -1.79
PTPRK-220ENST00000531466 SIX2Q9NPC8 291 aa3.9□□□□□ -1.79
PTPRK-220ENST00000531466 PLCB1Q9NQ66 1216 aa3.9□□□□□ -1.79
PTPRK-220ENST00000531466 ASIC3Q9UHC3 531 aa3.9□□□□□ -1.79
PTPRK-220ENST00000531466 NAP1L2Q9ULW6 460 aaPredicted RBP3.9□□□□□ -1.79
PTPRK-220ENST00000531466 PLOD2O00469 737 aa3.89□□□□□ -1.79
PTPRK-220ENST00000531466 SLC22A2O15244 555 aa3.89□□□□□ -1.79
PTPRK-220ENST00000531466 SEC14L5O43304 696 aa3.89□□□□□ -1.79
PTPRK-220ENST00000531466 PLA2G4BP0C869 781 aa3.89□□□□□ -1.79
PTPRK-220ENST00000531466 HTR3AP46098 478 aa3.89□□□□□ -1.79
PTPRK-220ENST00000531466 DECR1Q16698 335 aa3.89□□□□□ -1.79
PTPRK-220ENST00000531466 ANKRD45Q5TZF3 282 aa3.89□□□□□ -1.79
PTPRK-220ENST00000531466 WDR78Q5VTH9 848 aa3.89□□□□□ -1.79
PTPRK-220ENST00000531466 CDC20BQ86Y33 519 aa3.89□□□□□ -1.79
PTPRK-220ENST00000531466 C2CD5Q86YS7 1000 aa3.89□□□□□ -1.79
PTPRK-220ENST00000531466 LMNTD2Q8IXW0 634 aa3.89□□□□□ -1.79
PTPRK-220ENST00000531466 SMC5Q8IY18 1101 aa3.89□□□□□ -1.79
PTPRK-220ENST00000531466 ZNF614Q8N883 585 aa3.89□□□□□ -1.79
PTPRK-220ENST00000531466 VPS37AQ8NEZ2 397 aa3.89□□□□□ -1.79
PTPRK-220ENST00000531466 PHF21AQ96BD5 680 aa3.89□□□□□ -1.79
PTPRK-220ENST00000531466 PABPC5Q96DU9 382 aaKnown RBP3.89□□□□□ -1.79
PTPRK-220ENST00000531466 AGAP3Q96P47 875 aa3.89□□□□□ -1.79
PTPRK-220ENST00000531466 PKP2Q99959 881 aa3.89□□□□□ -1.79
PTPRK-220ENST00000531466 ACSS1Q9NUB1 689 aaPredicted RBP3.89□□□□□ -1.79
PTPRK-220ENST00000531466 CSAG2Q9Y5P2 127 aa3.89□□□□□ -1.79
PTPRK-220ENST00000531466 KLF2Q9Y5W3 355 aaPredicted RBP3.89□□□□□ -1.79
PTPRK-220ENST00000531466 COMMD10Q9Y6G5 202 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms