RNA–Protein interactions for RNA: ENST00000530927.5

GMDS-208, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GMDS, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-208ENST00000530927 CCDC3Q9BQI4 270 aa18.54■□□□□ 0.56
GMDS-208ENST00000530927 ETNK1Q9HBU6 452 aa18.54■□□□□ 0.56
GMDS-208ENST00000530927 TRNAU1APQ9NX07 287 aaKnown RBP18.54■□□□□ 0.56
GMDS-208ENST00000530927 ACACBO00763 2458 aa18.53■□□□□ 0.56
GMDS-208ENST00000530927 RP1P56715 2156 aa18.53■□□□□ 0.56
GMDS-208ENST00000530927 ACP5P13686 325 aa18.53■□□□□ 0.56
GMDS-208ENST00000530927 SPAM1P38567 509 aa18.53■□□□□ 0.56
GMDS-208ENST00000530927 ACTR1BP42025 376 aa18.53■□□□□ 0.56
GMDS-208ENST00000530927 GRIA1P42261 906 aa18.53■□□□□ 0.56
GMDS-208ENST00000530927 ACTR1AP61163 376 aa18.53■□□□□ 0.56
GMDS-208ENST00000530927 ILF3Q12906 894 aaKnown RBP eCLIP18.53■□□□□ 0.564e-7■■■■□ 23.5
GMDS-208ENST00000530927 OGFOD3Q6PK18 319 aa18.53■□□□□ 0.56
GMDS-208ENST00000530927 CRTC3Q6UUV7 619 aa18.53■□□□□ 0.56
GMDS-208ENST00000530927 GLMNQ92990 594 aa18.53■□□□□ 0.56
GMDS-208ENST00000530927 PLEKHG4BQ96PX9 1271 aa18.53■□□□□ 0.56
GMDS-208ENST00000530927 SRPK1Q96SB4 655 aaKnown RBP18.53■□□□□ 0.56
GMDS-208ENST00000530927 GSDMCQ9BYG8 508 aa18.53■□□□□ 0.56
GMDS-208ENST00000530927 SYNDIG1Q9H7V2 258 aa18.53■□□□□ 0.56
GMDS-208ENST00000530927 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.53■□□□□ 0.56
GMDS-208ENST00000530927 HACD3Q9P035 362 aa18.53■□□□□ 0.56
GMDS-208ENST00000530927 FKBPLQ9UIM3 349 aa18.53■□□□□ 0.56
GMDS-208ENST00000530927 KCNK6Q9Y257 313 aa18.53■□□□□ 0.56
GMDS-208ENST00000530927 PCDHB1Q9Y5F3 818 aa18.53■□□□□ 0.56
GMDS-208ENST00000530927 RNF215Q9Y6U7 377 aa18.53■□□□□ 0.56
GMDS-208ENST00000530927 ARHGEF17Q96PE2 2063 aaPredicted RBP18.53■□□□□ 0.56
GMDS-208ENST00000530927 ZNF106Q9H2Y7 1883 aaKnown RBP18.53■□□□□ 0.56
GMDS-208ENST00000530927 TRBV23OR9-2A0A075B6M9 112 aa18.52■□□□□ 0.56
GMDS-208ENST00000530927 CCDC78A2IDD5 438 aa18.52■□□□□ 0.56
GMDS-208ENST00000530927 STX7O15400 261 aaKnown RBP18.52■□□□□ 0.56
GMDS-208ENST00000530927 KIF5CO60282 957 aa18.52■□□□□ 0.56
GMDS-208ENST00000530927 MT-CO3P00414 261 aa18.52■□□□□ 0.56
GMDS-208ENST00000530927 GP1BAP07359 652 aa18.52■□□□□ 0.56
GMDS-208ENST00000530927 RPIAP49247 311 aa18.52■□□□□ 0.56
GMDS-208ENST00000530927 HLTFQ14527 1009 aaKnown RBP eCLIP18.52■□□□□ 0.568e-7■■■□□ 15.6
GMDS-208ENST00000530927 TAF1AQ15573 450 aaPredicted RBP18.52■□□□□ 0.56
GMDS-208ENST00000530927 P3H1Q32P28 736 aa18.52■□□□□ 0.56
GMDS-208ENST00000530927 CDCP2Q5VXM1 449 aa18.52■□□□□ 0.56
GMDS-208ENST00000530927 SDR16C5Q8N3Y7 309 aa18.52■□□□□ 0.56
GMDS-208ENST00000530927 Q8N9G6 341 aaPredicted RBP18.52■□□□□ 0.56
GMDS-208ENST00000530927 MDM1Q8TC05 714 aa18.52■□□□□ 0.56
GMDS-208ENST00000530927 COG1Q8WTW3 980 aa18.52■□□□□ 0.56
GMDS-208ENST00000530927 ZDHHC1Q8WTX9 485 aa18.52■□□□□ 0.56
GMDS-208ENST00000530927 UBE2Q2Q8WVN8 375 aa18.52■□□□□ 0.56
GMDS-208ENST00000530927 CCDC97Q96F63 343 aaPredicted RBP18.52■□□□□ 0.56
GMDS-208ENST00000530927 FRMD8P1Q9BZ68 369 aaPredicted RBP18.52■□□□□ 0.56
GMDS-208ENST00000530927 CDH19Q9H159 772 aa18.52■□□□□ 0.56
GMDS-208ENST00000530927 RAD18Q9NS91 495 aa18.52■□□□□ 0.56
GMDS-208ENST00000530927 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.52■□□□□ 0.56
GMDS-208ENST00000530927 VPS18Q9P253 973 aa18.52■□□□□ 0.56
GMDS-208ENST00000530927 SLC23A2Q9UGH3 650 aa18.52■□□□□ 0.56
GMDS-208ENST00000530927 CLCA2Q9UQC9 943 aa18.52■□□□□ 0.56
GMDS-208ENST00000530927 PKP3Q9Y446 797 aa18.52■□□□□ 0.56
GMDS-208ENST00000530927 JRKLQ9Y4A0 524 aa18.52■□□□□ 0.56
GMDS-208ENST00000530927 DMXL2Q8TDJ6 3036 aa18.52■□□□□ 0.56
GMDS-208ENST00000530927 GLYATL1P3A0A0U1RQE8 302 aa18.51■□□□□ 0.55
GMDS-208ENST00000530927 TRABD2BA6NFA1 517 aa18.51■□□□□ 0.55
GMDS-208ENST00000530927 NUAK1O60285 661 aa18.51■□□□□ 0.55
GMDS-208ENST00000530927 ECEL1O95672 775 aa18.51■□□□□ 0.55
GMDS-208ENST00000530927 AP2A1O95782 977 aa18.51■□□□□ 0.55
GMDS-208ENST00000530927 RPL22P35268 128 aaKnown RBP18.51■□□□□ 0.55
GMDS-208ENST00000530927 E2F1Q01094 437 aa18.51■□□□□ 0.55
GMDS-208ENST00000530927 CCNG2Q16589 344 aa18.51■□□□□ 0.55
GMDS-208ENST00000530927 C14orf28Q4W4Y0 310 aa18.51■□□□□ 0.55
GMDS-208ENST00000530927 PHYKPLQ8IUZ5 450 aa18.51■□□□□ 0.55
GMDS-208ENST00000530927 NAGSQ8N159 534 aa18.51■□□□□ 0.55
GMDS-208ENST00000530927 PRELID2Q8N945 189 aa18.51■□□□□ 0.55
GMDS-208ENST00000530927 OR52K1Q8NGK4 314 aa18.51■□□□□ 0.55
GMDS-208ENST00000530927 ABCG4Q9H172 646 aa18.51■□□□□ 0.55
GMDS-208ENST00000530927 LRRC40Q9H9A6 602 aa18.51■□□□□ 0.55
GMDS-208ENST00000530927 ARNT2Q9HBZ2 717 aa18.51■□□□□ 0.55
GMDS-208ENST00000530927 TRIM39Q9HCM9 518 aa18.51■□□□□ 0.55
GMDS-208ENST00000530927 NCKIPSDQ9NZQ3 722 aa18.51■□□□□ 0.55
GMDS-208ENST00000530927 TPRP12270 2363 aaKnown RBP18.51■□□□□ 0.55
GMDS-208ENST00000530927 IGF2RP11717 2491 aa18.51■□□□□ 0.55
GMDS-208ENST00000530927 MAP1BP46821 2468 aaKnown RBP18.51■□□□□ 0.55
GMDS-208ENST00000530927 ZFC3H1O60293 1989 aaKnown RBP18.51■□□□□ 0.55
GMDS-208ENST00000530927 GRID2O43424 1007 aa18.5■□□□□ 0.55
GMDS-208ENST00000530927 LDB2O43679 373 aa18.5■□□□□ 0.55
GMDS-208ENST00000530927 LPOP22079 712 aaPredicted RBP18.5■□□□□ 0.55
GMDS-208ENST00000530927 MSNP26038 577 aaKnown RBP18.5■□□□□ 0.55
GMDS-208ENST00000530927 STIP1P31948 543 aaKnown RBP18.5■□□□□ 0.55
GMDS-208ENST00000530927 ZNF140P52738 457 aaPredicted RBP18.5■□□□□ 0.55
GMDS-208ENST00000530927 TERF1P54274 439 aa18.5■□□□□ 0.55
GMDS-208ENST00000530927 CCL7P80098 99 aa18.5■□□□□ 0.55
GMDS-208ENST00000530927 POU6F1Q14863 301 aa18.5■□□□□ 0.55
GMDS-208ENST00000530927 CERCAMQ5T4B2 595 aa18.5■□□□□ 0.55
GMDS-208ENST00000530927 TTC27Q6P3X3 843 aa18.5■□□□□ 0.55
GMDS-208ENST00000530927 ZNF547Q8IVP9 402 aa18.5■□□□□ 0.55
GMDS-208ENST00000530927 DCBLD1Q8N8Z6 715 aa18.5■□□□□ 0.55
GMDS-208ENST00000530927 GDAP1Q8TB36 358 aa18.5■□□□□ 0.55
GMDS-208ENST00000530927 BRSK1Q8TDC3 778 aa18.5■□□□□ 0.55
GMDS-208ENST00000530927 VPS35Q96QK1 796 aa18.5■□□□□ 0.55
GMDS-208ENST00000530927 AP1M1Q9BXS5 423 aa18.5■□□□□ 0.55
GMDS-208ENST00000530927 FAM96AQ9H5X1 160 aa18.5■□□□□ 0.55
GMDS-208ENST00000530927 RAB6BQ9NRW1 208 aa18.5■□□□□ 0.55
GMDS-208ENST00000530927 EVA1BQ9NVM1 165 aa18.5■□□□□ 0.55
GMDS-208ENST00000530927 TBC1D29Q9UFV1 150 aa18.5■□□□□ 0.55
GMDS-208ENST00000530927 ZZEF1O43149 2961 aa18.5■□□□□ 0.55
GMDS-208ENST00000530927 A0A1W2PQM1 296 aa18.49■□□□□ 0.55
GMDS-208ENST00000530927 C2orf81A6NN90 581 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms