RNA–Protein interactions for RNA: ENST00000530004.5

TTC39A-216, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 1 (best) BASIC

Gene TTC39A, Length 1,780 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-216ENST00000530004 OLFM1Q99784 485 aa14.32□□□□□ -0.12
TTC39A-216ENST00000530004 C19orf43Q9BQ61 176 aa14.32□□□□□ -0.12
TTC39A-216ENST00000530004 PRMT8Q9NR22 394 aaPredicted RBP14.32□□□□□ -0.12
TTC39A-216ENST00000530004 FBXL12Q9NXK8 326 aa14.32□□□□□ -0.12
TTC39A-216ENST00000530004 TMEM216Q9P0N5 145 aa14.32□□□□□ -0.12
TTC39A-216ENST00000530004 EBF1Q9UH73 591 aa14.32□□□□□ -0.12
TTC39A-216ENST00000530004 CORO1CQ9ULV4 474 aaPredicted RBP14.32□□□□□ -0.12
TTC39A-216ENST00000530004 ANKRD6Q9Y2G4 727 aa14.32□□□□□ -0.12
TTC39A-216ENST00000530004 SLC30A1Q9Y6M5 507 aa14.32□□□□□ -0.12
TTC39A-216ENST00000530004 UPK3BL1B0FP48 263 aa14.31□□□□□ -0.12
TTC39A-216ENST00000530004 UPK3BL2E5RIL1 263 aa14.31□□□□□ -0.12
TTC39A-216ENST00000530004 LAMTOR5O43504 91 aa14.31□□□□□ -0.12
TTC39A-216ENST00000530004 PLIN3O60664 434 aa14.31□□□□□ -0.12
TTC39A-216ENST00000530004 NDUFS3O75489 264 aa14.31□□□□□ -0.12
TTC39A-216ENST00000530004 RNASEH2AO75792 299 aaKnown RBP14.31□□□□□ -0.12
TTC39A-216ENST00000530004 NEFHP12036 1026 aa14.31□□□□□ -0.12
TTC39A-216ENST00000530004 ADRB3P13945 408 aa14.31□□□□□ -0.12
TTC39A-216ENST00000530004 BPIP17213 487 aa14.31□□□□□ -0.12
TTC39A-216ENST00000530004 LHCGRP22888 699 aa14.31□□□□□ -0.12
TTC39A-216ENST00000530004 P2RY2P41231 377 aa14.31□□□□□ -0.12
TTC39A-216ENST00000530004 PXNP49023 591 aaPredicted RBP14.31□□□□□ -0.12
TTC39A-216ENST00000530004 PIP5KL1Q5T9C9 394 aa14.31□□□□□ -0.12
TTC39A-216ENST00000530004 AGBL4Q5VU57 503 aa14.31□□□□□ -0.12
TTC39A-216ENST00000530004 FBXL19Q6PCT2 694 aa14.31□□□□□ -0.12
TTC39A-216ENST00000530004 FAM151BQ6UXP7 276 aa14.31□□□□□ -0.12
TTC39A-216ENST00000530004 RGS9BPQ6ZS82 235 aa14.31□□□□□ -0.12
TTC39A-216ENST00000530004 USP30Q70CQ3 517 aa14.31□□□□□ -0.12
TTC39A-216ENST00000530004 ZNF771Q7L3S4 317 aaPredicted RBP14.31□□□□□ -0.12
TTC39A-216ENST00000530004 DTWD2Q8NBA8 298 aa14.31□□□□□ -0.12
TTC39A-216ENST00000530004 ZNF75CPQ92670 426 aaPredicted RBP14.31□□□□□ -0.12
TTC39A-216ENST00000530004 TSPAN17Q96FV3 270 aa14.31□□□□□ -0.12
TTC39A-216ENST00000530004 TCF12Q99081 682 aa14.31□□□□□ -0.12
TTC39A-216ENST00000530004 CD93Q9NPY3 652 aa14.31□□□□□ -0.12
TTC39A-216ENST00000530004 ITM2CQ9NQX7 267 aa14.31□□□□□ -0.12
TTC39A-216ENST00000530004 USP36Q9P275 1121 aaKnown RBP14.31□□□□□ -0.12
TTC39A-216ENST00000530004 B4GALT6Q9UBX8 382 aa14.31□□□□□ -0.12
TTC39A-216ENST00000530004 ACOT9Q9Y305 439 aa14.31□□□□□ -0.12
TTC39A-216ENST00000530004 VWA7Q9Y334 891 aa14.31□□□□□ -0.12
TTC39A-216ENST00000530004 ZDBF2Q9HCK1 2354 aa14.3□□□□□ -0.12
TTC39A-216ENST00000530004 UBA6A0AVT1 1052 aaPredicted RBP14.3□□□□□ -0.12
TTC39A-216ENST00000530004 GPR39O43194 453 aa14.3□□□□□ -0.12
TTC39A-216ENST00000530004 GPR37L1O60883 481 aa14.3□□□□□ -0.12
TTC39A-216ENST00000530004 SRP72O76094 671 aaKnown RBP14.3□□□□□ -0.12
TTC39A-216ENST00000530004 PRAMEF1O95521 474 aa14.3□□□□□ -0.12
TTC39A-216ENST00000530004 PROCP04070 461 aa14.3□□□□□ -0.12
TTC39A-216ENST00000530004 TTPAP49638 278 aa14.3□□□□□ -0.12
TTC39A-216ENST00000530004 TPMTP51580 245 aa14.3□□□□□ -0.12
TTC39A-216ENST00000530004 CACNG1Q06432 222 aa14.3□□□□□ -0.12
TTC39A-216ENST00000530004 CCDC15Q0P6D6 951 aa14.3□□□□□ -0.12
TTC39A-216ENST00000530004 SFSWAPQ12872 951 aaKnown RBP14.3□□□□□ -0.12
TTC39A-216ENST00000530004 AARS2Q5JTZ9 985 aaKnown RBP14.3□□□□□ -0.12
TTC39A-216ENST00000530004 FAM45BPQ6NSW5 357 aa14.3□□□□□ -0.12
TTC39A-216ENST00000530004 ZNF549Q6P9A3 640 aa14.3□□□□□ -0.12
TTC39A-216ENST00000530004 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.3□□□□□ -0.12
TTC39A-216ENST00000530004 KBTBD6Q86V97 674 aa14.3□□□□□ -0.12
TTC39A-216ENST00000530004 FAM45AQ8TCE6 357 aa14.3□□□□□ -0.12
TTC39A-216ENST00000530004 GANCQ8TET4 914 aa14.3□□□□□ -0.12
TTC39A-216ENST00000530004 LPGAT1Q92604 370 aa14.3□□□□□ -0.12
TTC39A-216ENST00000530004 TSNARE1Q96NA8 513 aa14.3□□□□□ -0.12
TTC39A-216ENST00000530004 MECRQ9BV79 373 aa14.3□□□□□ -0.12
TTC39A-216ENST00000530004 C1QTNF1Q9BXJ1 281 aa14.3□□□□□ -0.12
TTC39A-216ENST00000530004 TPSD1Q9BZJ3 242 aa14.3□□□□□ -0.12
TTC39A-216ENST00000530004 NSRP1Q9H0G5 558 aaKnown RBP14.3□□□□□ -0.12
TTC39A-216ENST00000530004 FGFR1OP2Q9NVK5 253 aa14.3□□□□□ -0.12
TTC39A-216ENST00000530004 APPL1Q9UKG1 709 aa14.3□□□□□ -0.12
TTC39A-216ENST00000530004 FZD4Q9ULV1 537 aa14.3□□□□□ -0.12
TTC39A-216ENST00000530004 VPS9D1Q9Y2B5 631 aa14.3□□□□□ -0.12
TTC39A-216ENST00000530004 A0A087X1B8 175 aa14.29□□□□□ -0.12
TTC39A-216ENST00000530004 PRR33A8MZF0 331 aa14.29□□□□□ -0.12
TTC39A-216ENST00000530004 GAPDHSO14556 408 aaPredicted RBP14.29□□□□□ -0.12
TTC39A-216ENST00000530004 PFDN6O15212 129 aa14.29□□□□□ -0.12
TTC39A-216ENST00000530004 DNAJC6O75061 913 aa14.29□□□□□ -0.12
TTC39A-216ENST00000530004 CYP2A6P11509 494 aaPredicted RBP14.29□□□□□ -0.12
TTC39A-216ENST00000530004 BGNP21810 368 aa14.29□□□□□ -0.12
TTC39A-216ENST00000530004 XPAP23025 273 aaPredicted RBP14.29□□□□□ -0.12
TTC39A-216ENST00000530004 HOXA6P31267 233 aa14.29□□□□□ -0.12
TTC39A-216ENST00000530004 SPAM1P38567 509 aa14.29□□□□□ -0.12
TTC39A-216ENST00000530004 CDKN2DP55273 166 aa14.29□□□□□ -0.12
TTC39A-216ENST00000530004 PTSQ03393 145 aa14.29□□□□□ -0.12
TTC39A-216ENST00000530004 CCDC153Q494R4 210 aa14.29□□□□□ -0.12
TTC39A-216ENST00000530004 RNF187Q5TA31 235 aaPredicted RBP14.29□□□□□ -0.12
TTC39A-216ENST00000530004 TSSK4Q6SA08 328 aa14.29□□□□□ -0.12
TTC39A-216ENST00000530004 FAM47EQ6ZV65 393 aa14.29□□□□□ -0.12
TTC39A-216ENST00000530004 TAS2R42Q7RTR8 314 aa14.29□□□□□ -0.12
TTC39A-216ENST00000530004 MAML2Q8IZL2 1156 aaPredicted RBP14.29□□□□□ -0.12
TTC39A-216ENST00000530004 KCTD4Q8WVF5 259 aa14.29□□□□□ -0.12
TTC39A-216ENST00000530004 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.29□□□□□ -0.12
TTC39A-216ENST00000530004 RAB7BQ96AH8 199 aa14.29□□□□□ -0.12
TTC39A-216ENST00000530004 MANSC1Q9H8J5 431 aa14.29□□□□□ -0.12
TTC39A-216ENST00000530004 PCDH12Q9NPG4 1184 aa14.29□□□□□ -0.12
TTC39A-216ENST00000530004 IL26Q9NPH9 171 aa14.29□□□□□ -0.12
TTC39A-216ENST00000530004 NCKAP1Q9Y2A7 1128 aa14.29□□□□□ -0.12
TTC39A-216ENST00000530004 GLYATL1P3A0A0U1RQE8 302 aa14.29□□□□□ -0.12
TTC39A-216ENST00000530004 ERICH4A6NGS2 130 aa14.29□□□□□ -0.12
TTC39A-216ENST00000530004 AREL1O15033 823 aa14.29□□□□□ -0.12
TTC39A-216ENST00000530004 ZNF217O75362 1048 aa14.29□□□□□ -0.12
TTC39A-216ENST00000530004 IGLV3-19P01714 112 aa14.29□□□□□ -0.12
TTC39A-216ENST00000530004 BPGMP07738 259 aa14.29□□□□□ -0.12
TTC39A-216ENST00000530004 COL6A2P12110 1019 aa14.29□□□□□ -0.12
TTC39A-216ENST00000530004 FMO4P31512 558 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms