RNA–Protein interactions for RNA: ENST00000529553.1

AMBRA1-207, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-207ENST00000529553 RARRES3Q9UL19 164 aa11.48□□□□□ -0.57
AMBRA1-207ENST00000529553 KLF2Q9Y5W3 355 aaPredicted RBP11.48□□□□□ -0.57
AMBRA1-207ENST00000529553 POLEQ07864 2286 aa11.48□□□□□ -0.57
AMBRA1-207ENST00000529553 TNRC6AQ8NDV7 1962 aaKnown RBP11.47□□□□□ -0.57
AMBRA1-207ENST00000529553 PRSS44E7EML9 344 aa11.47□□□□□ -0.57
AMBRA1-207ENST00000529553 ZNF185O15231 689 aa11.47□□□□□ -0.57
AMBRA1-207ENST00000529553 CREB3O43889 395 aa11.47□□□□□ -0.57
AMBRA1-207ENST00000529553 CPP00450 1065 aa11.47□□□□□ -0.57
AMBRA1-207ENST00000529553 RAB40ALP0C0E4 278 aa11.47□□□□□ -0.57
AMBRA1-207ENST00000529553 LHCGRP22888 699 aa11.47□□□□□ -0.57
AMBRA1-207ENST00000529553 MMP8P22894 467 aa11.47□□□□□ -0.57
AMBRA1-207ENST00000529553 VAV2P52735 878 aa11.47□□□□□ -0.57
AMBRA1-207ENST00000529553 RPS18P62269 152 aaKnown RBP11.47□□□□□ -0.57
AMBRA1-207ENST00000529553 NOMO3P69849 1222 aa11.47□□□□□ -0.57
AMBRA1-207ENST00000529553 ACY1Q03154 408 aa11.47□□□□□ -0.57
AMBRA1-207ENST00000529553 IL10RBQ08334 325 aa11.47□□□□□ -0.57
AMBRA1-207ENST00000529553 ART3Q13508 389 aa11.47□□□□□ -0.57
AMBRA1-207ENST00000529553 TESK1Q15569 626 aa11.47□□□□□ -0.57
AMBRA1-207ENST00000529553 CACHD1Q5VU97 1274 aa11.47□□□□□ -0.57
AMBRA1-207ENST00000529553 RBM12BQ8IXT5 1001 aaKnown RBP11.47□□□□□ -0.57
AMBRA1-207ENST00000529553 UBE2Q2Q8WVN8 375 aa11.47□□□□□ -0.57
AMBRA1-207ENST00000529553 RNF31Q96EP0 1072 aa11.47□□□□□ -0.57
AMBRA1-207ENST00000529553 SLC41A2Q96JW4 573 aa11.47□□□□□ -0.57
AMBRA1-207ENST00000529553 NSMCE3Q96MG7 304 aa11.47□□□□□ -0.57
AMBRA1-207ENST00000529553 TIGD1Q96MW7 591 aa11.47□□□□□ -0.57
AMBRA1-207ENST00000529553 PLEKHG4BQ96PX9 1271 aa11.47□□□□□ -0.57
AMBRA1-207ENST00000529553 SLC39A8Q9C0K1 460 aa11.47□□□□□ -0.57
AMBRA1-207ENST00000529553 SIX2Q9NPC8 291 aa11.47□□□□□ -0.57
AMBRA1-207ENST00000529553 FZD10Q9ULW2 581 aa11.47□□□□□ -0.57
AMBRA1-207ENST00000529553 PCDHGC4Q9Y5F7 938 aa11.47□□□□□ -0.57
AMBRA1-207ENST00000529553 MTORP42345 2549 aa11.47□□□□□ -0.57
AMBRA1-207ENST00000529553 NPIPB15A6NHN6 443 aaPredicted RBP11.46□□□□□ -0.57
AMBRA1-207ENST00000529553 A6NL46 340 aa11.46□□□□□ -0.57
AMBRA1-207ENST00000529553 SNX2O60749 519 aa11.46□□□□□ -0.57
AMBRA1-207ENST00000529553 TIAF1O95411 115 aa11.46□□□□□ -0.57
AMBRA1-207ENST00000529553 ASMTLO95671 621 aa11.46□□□□□ -0.57
AMBRA1-207ENST00000529553 VIPP01282 170 aa11.46□□□□□ -0.57
AMBRA1-207ENST00000529553 HSP90AA1P07900 732 aaKnown RBP11.46□□□□□ -0.57
AMBRA1-207ENST00000529553 KRT3P12035 628 aa11.46□□□□□ -0.57
AMBRA1-207ENST00000529553 TYRP1P17643 537 aa11.46□□□□□ -0.57
AMBRA1-207ENST00000529553 RFC1P35251 1148 aaPredicted RBP11.46□□□□□ -0.57
AMBRA1-207ENST00000529553 HSPA9P38646 679 aaKnown RBP11.46□□□□□ -0.57
AMBRA1-207ENST00000529553 PAK1Q13153 545 aa11.46□□□□□ -0.57
AMBRA1-207ENST00000529553 TUBB3Q13509 450 aa11.46□□□□□ -0.57
AMBRA1-207ENST00000529553 RALGPS1Q5JS13 557 aa11.46□□□□□ -0.57
AMBRA1-207ENST00000529553 LYPLAL1Q5VWZ2 237 aa11.46□□□□□ -0.57
AMBRA1-207ENST00000529553 NAA35Q5VZE5 725 aa11.46□□□□□ -0.57
AMBRA1-207ENST00000529553 ISM2Q6H9L7 571 aa11.46□□□□□ -0.57
AMBRA1-207ENST00000529553 USP45Q70EL2 814 aa11.46□□□□□ -0.57
AMBRA1-207ENST00000529553 ZNF677Q86XU0 584 aa11.46□□□□□ -0.57
AMBRA1-207ENST00000529553 NDUFAF2Q8N183 169 aa11.46□□□□□ -0.57
AMBRA1-207ENST00000529553 AOPEPQ8N6M6 819 aa11.46□□□□□ -0.57
AMBRA1-207ENST00000529553 SIDT2Q8NBJ9 832 aaKnown RBP11.46□□□□□ -0.57
AMBRA1-207ENST00000529553 OR8K5Q8NH50 307 aa11.46□□□□□ -0.57
AMBRA1-207ENST00000529553 JOSD2Q8TAC2 188 aa11.46□□□□□ -0.57
AMBRA1-207ENST00000529553 UBXN4Q92575 508 aa11.46□□□□□ -0.57
AMBRA1-207ENST00000529553 LRFN5Q96NI6 719 aa11.46□□□□□ -0.57
AMBRA1-207ENST00000529553 ZNF599Q96NL3 588 aa11.46□□□□□ -0.57
AMBRA1-207ENST00000529553 WASH6PQ9NQA3 447 aa11.46□□□□□ -0.57
AMBRA1-207ENST00000529553 COPG2Q9UBF2 871 aa11.46□□□□□ -0.57
AMBRA1-207ENST00000529553 AJAP1Q9UKB5 411 aaPredicted RBP11.46□□□□□ -0.57
AMBRA1-207ENST00000529553 SLC30A1Q9Y6M5 507 aa11.46□□□□□ -0.57
AMBRA1-207ENST00000529553 A0A1B0GUH1 482 aa11.45□□□□□ -0.58
AMBRA1-207ENST00000529553 EIF3CLB5ME19 914 aaKnown RBP11.45□□□□□ -0.58
AMBRA1-207ENST00000529553 KIF1CO43896 1103 aaKnown RBP11.45□□□□□ -0.58
AMBRA1-207ENST00000529553 CPNE3O75131 537 aaKnown RBP11.45□□□□□ -0.58
AMBRA1-207ENST00000529553 ALPPP05187 535 aa11.45□□□□□ -0.58
AMBRA1-207ENST00000529553 KLK3P07288 261 aaPredicted RBP11.45□□□□□ -0.58
AMBRA1-207ENST00000529553 PNMA6AP0CW24 399 aaPredicted RBP11.45□□□□□ -0.58
AMBRA1-207ENST00000529553 PRKCSHP14314 528 aaPredicted RBP11.45□□□□□ -0.58
AMBRA1-207ENST00000529553 ZNF30P17039 623 aa11.45□□□□□ -0.58
AMBRA1-207ENST00000529553 CAPZBP47756 277 aa11.45□□□□□ -0.58
AMBRA1-207ENST00000529553 GSDMDP57764 484 aa11.45□□□□□ -0.58
AMBRA1-207ENST00000529553 PTSQ03393 145 aa11.45□□□□□ -0.58
AMBRA1-207ENST00000529553 ZNF235Q14590 738 aa11.45□□□□□ -0.58
AMBRA1-207ENST00000529553 LBRQ14739 615 aaKnown RBP11.45□□□□□ -0.58
AMBRA1-207ENST00000529553 TAF3Q5VWG9 929 aa11.45□□□□□ -0.58
AMBRA1-207ENST00000529553 SCYL2Q6P3W7 929 aa11.45□□□□□ -0.58
AMBRA1-207ENST00000529553 TRIM74Q86UV6 250 aa11.45□□□□□ -0.58
AMBRA1-207ENST00000529553 KCNMB4Q86W47 210 aa11.45□□□□□ -0.58
AMBRA1-207ENST00000529553 KMT5CQ86Y97 462 aa11.45□□□□□ -0.58
AMBRA1-207ENST00000529553 PHYKPLQ8IUZ5 450 aa11.45□□□□□ -0.58
AMBRA1-207ENST00000529553 FNIP1Q8TF40 1166 aa11.45□□□□□ -0.58
AMBRA1-207ENST00000529553 TM9SF4Q92544 642 aa11.45□□□□□ -0.58
AMBRA1-207ENST00000529553 MR1Q95460 341 aa11.45□□□□□ -0.58
AMBRA1-207ENST00000529553 SCAMP4Q969E2 229 aa11.45□□□□□ -0.58
AMBRA1-207ENST00000529553 HDAC11Q96DB2 347 aa11.45□□□□□ -0.58
AMBRA1-207ENST00000529553 CELF6Q96J87 481 aaKnown RBP11.45□□□□□ -0.58
AMBRA1-207ENST00000529553 NUDCD1Q96RS6 583 aa11.45□□□□□ -0.58
AMBRA1-207ENST00000529553 EIF3CQ99613 913 aaKnown RBP11.45□□□□□ -0.58
AMBRA1-207ENST00000529553 NLNQ9BYT8 704 aa11.45□□□□□ -0.58
AMBRA1-207ENST00000529553 ILKAPQ9H0C8 392 aaPredicted RBP11.45□□□□□ -0.58
AMBRA1-207ENST00000529553 SP110Q9HB58 689 aa11.45□□□□□ -0.58
AMBRA1-207ENST00000529553 CHST11Q9NPF2 352 aa11.45□□□□□ -0.58
AMBRA1-207ENST00000529553 KIAA1468Q9P260 1216 aa11.45□□□□□ -0.58
AMBRA1-207ENST00000529553 CD84Q9UIB8 345 aa11.45□□□□□ -0.58
AMBRA1-207ENST00000529553 MAN1B1Q9UKM7 699 aa11.45□□□□□ -0.58
AMBRA1-207ENST00000529553 ITGB1BP2Q9UKP3 347 aa11.45□□□□□ -0.58
AMBRA1-207ENST00000529553 TCFL5Q9UL49 500 aa11.45□□□□□ -0.58
AMBRA1-207ENST00000529553 SNX7Q9UNH6 387 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms