RNA–Protein interactions for RNA: ENST00000527189.5

CAPN1-207, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 558 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-207ENST00000527189 LIMK2P53671 638 aa13.27□□□□□ -0.29
CAPN1-207ENST00000527189 DYNLT1P63172 113 aa13.27□□□□□ -0.29
CAPN1-207ENST00000527189 GALNT3Q14435 633 aa13.27□□□□□ -0.29
CAPN1-207ENST00000527189 AMZ1Q400G9 498 aa13.27□□□□□ -0.29
CAPN1-207ENST00000527189 ARHGAP40Q5TG30 622 aa13.27□□□□□ -0.29
CAPN1-207ENST00000527189 IYDQ6PHW0 289 aa13.27□□□□□ -0.29
CAPN1-207ENST00000527189 SPOCD1Q6ZMY3 1216 aa13.27□□□□□ -0.29
CAPN1-207ENST00000527189 ZNF574Q6ZN55 896 aaPredicted RBP13.27□□□□□ -0.29
CAPN1-207ENST00000527189 CCDC81Q6ZN84 652 aa13.27□□□□□ -0.29
CAPN1-207ENST00000527189 USP53Q70EK8 1073 aa13.27□□□□□ -0.29
CAPN1-207ENST00000527189 CHST15Q7LFX5 561 aaPredicted RBP13.27□□□□□ -0.29
CAPN1-207ENST00000527189 LYSMD3Q7Z3D4 306 aa13.27□□□□□ -0.29
CAPN1-207ENST00000527189 JAMLQ86YT9 394 aa13.27□□□□□ -0.29
CAPN1-207ENST00000527189 KATNAL2Q8IYT4 538 aa13.27□□□□□ -0.29
CAPN1-207ENST00000527189 TRAM1L1Q8N609 369 aa13.27□□□□□ -0.29
CAPN1-207ENST00000527189 AVL9Q8NBF6 648 aa13.27□□□□□ -0.29
CAPN1-207ENST00000527189 DTX3LQ8TDB6 740 aa13.27□□□□□ -0.29
CAPN1-207ENST00000527189 PATE1Q8WXA2 126 aa13.27□□□□□ -0.29
CAPN1-207ENST00000527189 P3H4Q92791 437 aa13.27□□□□□ -0.29
CAPN1-207ENST00000527189 HERPUD2Q9BSE4 406 aa13.27□□□□□ -0.29
CAPN1-207ENST00000527189 GPR63Q9BZJ6 419 aa13.27□□□□□ -0.29
CAPN1-207ENST00000527189 TRABDQ9H4I3 376 aa13.27□□□□□ -0.29
CAPN1-207ENST00000527189 STN1Q9H668 368 aaKnown RBP13.27□□□□□ -0.29
CAPN1-207ENST00000527189 RDH14Q9HBH5 336 aa13.27□□□□□ -0.29
CAPN1-207ENST00000527189 SARS2Q9NP81 518 aaKnown RBP13.27□□□□□ -0.29
CAPN1-207ENST00000527189 SEPT10Q9P0V9 454 aa13.27□□□□□ -0.29
CAPN1-207ENST00000527189 PDP2Q9P2J9 529 aa13.27□□□□□ -0.29
CAPN1-207ENST00000527189 HYOU1Q9Y4L1 999 aa13.27□□□□□ -0.29
CAPN1-207ENST00000527189 PCDHA13Q9Y5I0 950 aa13.27□□□□□ -0.29
CAPN1-207ENST00000527189 OAS3Q9Y6K5 1087 aaKnown RBP13.27□□□□□ -0.29
CAPN1-207ENST00000527189 KIR2DS5A0A0G2JLQ3 304 aa13.26□□□□□ -0.29
CAPN1-207ENST00000527189 A0A0G2JNG1 304 aa13.26□□□□□ -0.29
CAPN1-207ENST00000527189 IGHV5-10-1A0A0J9YXX1 117 aa13.26□□□□□ -0.29
CAPN1-207ENST00000527189 LOC285095A0A1B0GVY8 99 aa13.26□□□□□ -0.29
CAPN1-207ENST00000527189 HACD1B0YJ81 288 aa13.26□□□□□ -0.29
CAPN1-207ENST00000527189 KIR2DS3K7RE56 304 aa13.26□□□□□ -0.29
CAPN1-207ENST00000527189 GRID2O43424 1007 aa13.26□□□□□ -0.29
CAPN1-207ENST00000527189 SLC25A14O95258 325 aaPredicted RBP13.26□□□□□ -0.29
CAPN1-207ENST00000527189 LIPCP11150 499 aa13.26□□□□□ -0.29
CAPN1-207ENST00000527189 HGFP14210 728 aa13.26□□□□□ -0.29
CAPN1-207ENST00000527189 CYLC1P35663 651 aaPredicted RBP13.26□□□□□ -0.29
CAPN1-207ENST00000527189 KIR2DS5Q14953 304 aa13.26□□□□□ -0.29
CAPN1-207ENST00000527189 ZNF569Q5MCW4 686 aa13.26□□□□□ -0.29
CAPN1-207ENST00000527189 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.26□□□□□ -0.29
CAPN1-207ENST00000527189 ZDHHC20Q5W0Z9 365 aa13.26□□□□□ -0.29
CAPN1-207ENST00000527189 C11orf63Q6NUN7 778 aa13.26□□□□□ -0.29
CAPN1-207ENST00000527189 TMEM71Q6P5X7 295 aa13.26□□□□□ -0.29
CAPN1-207ENST00000527189 KDELC2Q7Z4H8 507 aa13.26□□□□□ -0.29
CAPN1-207ENST00000527189 SLC9B2Q86UD5 537 aa13.26□□□□□ -0.29
CAPN1-207ENST00000527189 GPR26Q8NDV2 337 aa13.26□□□□□ -0.29
CAPN1-207ENST00000527189 SPATA22Q8NHS9 363 aa13.26□□□□□ -0.29
CAPN1-207ENST00000527189 RBM41Q96IZ5 413 aaKnown RBP13.26□□□□□ -0.29
CAPN1-207ENST00000527189 SLC38A3Q99624 504 aa13.26□□□□□ -0.29
CAPN1-207ENST00000527189 NUDT22Q9BRQ3 303 aa13.26□□□□□ -0.29
CAPN1-207ENST00000527189 SPATA16Q9BXB7 569 aa13.26□□□□□ -0.29
CAPN1-207ENST00000527189 CEP41Q9BYV8 373 aa13.26□□□□□ -0.29
CAPN1-207ENST00000527189 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.26□□□□□ -0.29
CAPN1-207ENST00000527189 KCNK4Q9NYG8 393 aa13.26□□□□□ -0.29
CAPN1-207ENST00000527189 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.26□□□□□ -0.29
CAPN1-207ENST00000527189 ATXN10Q9UBB4 475 aa13.26□□□□□ -0.29
CAPN1-207ENST00000527189 FAM153AQ9UHL3 310 aa13.26□□□□□ -0.29
CAPN1-207ENST00000527189 ZNF711Q9Y462 761 aa13.26□□□□□ -0.29
CAPN1-207ENST00000527189 COL6A6A6NMZ7 2263 aa13.25□□□□□ -0.29
CAPN1-207ENST00000527189 hCG_1818297A0A087WSY0 165 aa13.25□□□□□ -0.29
CAPN1-207ENST00000527189 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.25□□□□□ -0.29
CAPN1-207ENST00000527189 CHUKO15111 745 aa13.25□□□□□ -0.29
CAPN1-207ENST00000527189 VEGFDO43915 354 aa13.25□□□□□ -0.29
CAPN1-207ENST00000527189 MT-CYBP00156 380 aaPredicted RBP13.25□□□□□ -0.29
CAPN1-207ENST00000527189 F3P13726 295 aa13.25□□□□□ -0.29
CAPN1-207ENST00000527189 ITIH1P19827 911 aa13.25□□□□□ -0.29
CAPN1-207ENST00000527189 HMGCLP35914 325 aa13.25□□□□□ -0.29
CAPN1-207ENST00000527189 TNNT3P45378 269 aaPredicted RBP13.25□□□□□ -0.29
CAPN1-207ENST00000527189 COPS2P61201 443 aa13.25□□□□□ -0.29
CAPN1-207ENST00000527189 HHEXQ03014 270 aa13.25□□□□□ -0.29
CAPN1-207ENST00000527189 WASHC5Q12768 1159 aa13.25□□□□□ -0.29
CAPN1-207ENST00000527189 XRCC4Q13426 336 aa13.25□□□□□ -0.29
CAPN1-207ENST00000527189 C16orf72Q14CZ0 275 aa13.25□□□□□ -0.29
CAPN1-207ENST00000527189 PPP2R5EQ16537 467 aa13.25□□□□□ -0.29
CAPN1-207ENST00000527189 PCSK7Q16549 785 aa13.25□□□□□ -0.29
CAPN1-207ENST00000527189 KAZNQ674X7 775 aa13.25□□□□□ -0.29
CAPN1-207ENST00000527189 WDR74Q6RFH5 385 aaPredicted RBP13.25□□□□□ -0.29
CAPN1-207ENST00000527189 AGBL5Q8NDL9 886 aa13.25□□□□□ -0.29
CAPN1-207ENST00000527189 CCDC112Q8NEF3 446 aa13.25□□□□□ -0.29
CAPN1-207ENST00000527189 OR10G6Q8NH81 332 aa13.25□□□□□ -0.29
CAPN1-207ENST00000527189 SLC37A2Q8TED4 501 aa13.25□□□□□ -0.29
CAPN1-207ENST00000527189 USP7Q93009 1102 aa13.25□□□□□ -0.29
CAPN1-207ENST00000527189 GLYATL1Q969I3 302 aa13.25□□□□□ -0.29
CAPN1-207ENST00000527189 AHCYL2Q96HN2 611 aaKnown RBP13.25□□□□□ -0.29
CAPN1-207ENST00000527189 PLEKHG4BQ96PX9 1271 aa13.25□□□□□ -0.29
CAPN1-207ENST00000527189 PANX2Q96RD6 677 aa13.25□□□□□ -0.29
CAPN1-207ENST00000527189 FCRL5Q96RD9 977 aa13.25□□□□□ -0.29
CAPN1-207ENST00000527189 TAAR9Q96RI9 348 aa13.25□□□□□ -0.29
CAPN1-207ENST00000527189 EPB41L1Q9H4G0 881 aa13.25□□□□□ -0.29
CAPN1-207ENST00000527189 SAE1Q9UBE0 346 aaPredicted RBP13.25□□□□□ -0.29
CAPN1-207ENST00000527189 TBC1D29Q9UFV1 150 aa13.25□□□□□ -0.29
CAPN1-207ENST00000527189 TRHDEQ9UKU6 1024 aa13.25□□□□□ -0.29
CAPN1-207ENST00000527189 SHOC2Q9UQ13 582 aa13.25□□□□□ -0.29
CAPN1-207ENST00000527189 EFR3BQ9Y2G0 817 aa13.25□□□□□ -0.29
CAPN1-207ENST00000527189 PCDHB11Q9Y5F2 797 aa13.25□□□□□ -0.29
CAPN1-207ENST00000527189 PCDHGA3Q9Y5H0 932 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms