RNA–Protein interactions for RNA: ENST00000526357.5

CTNND1-213, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,994 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-213ENST00000526357 TBC1D3GQ6DHY5 549 aa9.37□□□□□ -0.91
CTNND1-213ENST00000526357 TBC1D3CQ6IPX1 549 aa9.37□□□□□ -0.91
CTNND1-213ENST00000526357 PRR23BQ6ZRT6 265 aa9.37□□□□□ -0.91
CTNND1-213ENST00000526357 ADGRG6Q86SQ4 1221 aa9.37□□□□□ -0.91
CTNND1-213ENST00000526357 CUZD1Q86UP6 607 aa9.37□□□□□ -0.91
CTNND1-213ENST00000526357 UNC5BQ8IZJ1 945 aa9.37□□□□□ -0.91
CTNND1-213ENST00000526357 TBC1D3Q8IZP1 549 aaPredicted RBP9.37□□□□□ -0.91
CTNND1-213ENST00000526357 ATP6V1C2Q8NEY4 427 aa9.37□□□□□ -0.91
CTNND1-213ENST00000526357 NXPE2Q96DL1 559 aa9.37□□□□□ -0.91
CTNND1-213ENST00000526357 GAD1Q99259 594 aa9.37□□□□□ -0.91
CTNND1-213ENST00000526357 TCF25Q9BQ70 676 aa9.37□□□□□ -0.91
CTNND1-213ENST00000526357 CCDC28BQ9BUN5 200 aa9.37□□□□□ -0.91
CTNND1-213ENST00000526357 TMEM168Q9H0V1 697 aa9.37□□□□□ -0.91
CTNND1-213ENST00000526357 LRTM1Q9HBL6 345 aa9.37□□□□□ -0.91
CTNND1-213ENST00000526357 MOV10Q9HCE1 1003 aaKnown RBP9.37□□□□□ -0.91
CTNND1-213ENST00000526357 CORO1CQ9ULV4 474 aaPredicted RBP9.37□□□□□ -0.91
CTNND1-213ENST00000526357 RAB26Q9ULW5 256 aa9.37□□□□□ -0.91
CTNND1-213ENST00000526357 VWA7Q9Y334 891 aa9.37□□□□□ -0.91
CTNND1-213ENST00000526357 FADS3Q9Y5Q0 445 aa9.37□□□□□ -0.91
CTNND1-213ENST00000526357 FKBP7Q9Y680 259 aa9.37□□□□□ -0.91
CTNND1-213ENST00000526357 MBD5Q9P267 1494 aa9.37□□□□□ -0.91
CTNND1-213ENST00000526357 PER2O15055 1255 aa9.37□□□□□ -0.91
CTNND1-213ENST00000526357 NRP2O60462 931 aa9.37□□□□□ -0.91
CTNND1-213ENST00000526357 GJB6O95452 261 aa9.37□□□□□ -0.91
CTNND1-213ENST00000526357 GNPDA1P46926 289 aa9.37□□□□□ -0.91
CTNND1-213ENST00000526357 SCNN1GP51170 649 aa9.37□□□□□ -0.91
CTNND1-213ENST00000526357 MRPS6P82932 125 aaKnown RBP9.37□□□□□ -0.91
CTNND1-213ENST00000526357 POTEHQ6S545 545 aa9.37□□□□□ -0.91
CTNND1-213ENST00000526357 LRRC70Q7Z2Q7 622 aa9.37□□□□□ -0.91
CTNND1-213ENST00000526357 LAPTM4BQ86VI4 370 aa9.37□□□□□ -0.91
CTNND1-213ENST00000526357 ZZZ3Q8IYH5 903 aa9.37□□□□□ -0.91
CTNND1-213ENST00000526357 ZBTB2Q8N680 514 aa9.37□□□□□ -0.91
CTNND1-213ENST00000526357 CPSF7Q8N684 471 aaKnown RBP9.37□□□□□ -0.91
CTNND1-213ENST00000526357 C1orf216Q8TAB5 229 aa9.37□□□□□ -0.91
CTNND1-213ENST00000526357 SCGB3A2Q96PL1 93 aa9.37□□□□□ -0.91
CTNND1-213ENST00000526357 MCCC2Q9HCC0 563 aa9.37□□□□□ -0.91
CTNND1-213ENST00000526357 OR2AT4A6NND4 320 aa9.37□□□□□ -0.91
CTNND1-213ENST00000526357 DNAJA2O60884 412 aa9.37□□□□□ -0.91
CTNND1-213ENST00000526357 VIPP01282 170 aa9.37□□□□□ -0.91
CTNND1-213ENST00000526357 IFNW1P05000 195 aa9.37□□□□□ -0.91
CTNND1-213ENST00000526357 APODP05090 189 aa9.37□□□□□ -0.91
CTNND1-213ENST00000526357 HNRNPLP14866 589 aaKnown RBP eCLIP9.37□□□□□ -0.91
CTNND1-213ENST00000526357 FSHRP23945 695 aa9.37□□□□□ -0.91
CTNND1-213ENST00000526357 PTX3P26022 381 aaPredicted RBP9.37□□□□□ -0.91
CTNND1-213ENST00000526357 EPHA3P29320 983 aa9.37□□□□□ -0.91
CTNND1-213ENST00000526357 CDC25CP30307 473 aa9.37□□□□□ -0.91
CTNND1-213ENST00000526357 CCR10P46092 362 aa9.37□□□□□ -0.91
CTNND1-213ENST00000526357 ZNF311Q5JNZ3 666 aa9.37□□□□□ -0.91
CTNND1-213ENST00000526357 GLYATQ6IB77 296 aa9.37□□□□□ -0.91
CTNND1-213ENST00000526357 OTOP1Q7RTM1 612 aa9.37□□□□□ -0.91
CTNND1-213ENST00000526357 NUP54Q7Z3B4 507 aa9.37□□□□□ -0.91
CTNND1-213ENST00000526357 DGLUCYQ7Z3D6 616 aa9.37□□□□□ -0.91
CTNND1-213ENST00000526357 FAM35AQ86V20 835 aa9.37□□□□□ -0.91
CTNND1-213ENST00000526357 TMEM17Q86X19 198 aa9.37□□□□□ -0.91
CTNND1-213ENST00000526357 CCDC107Q8WV48 283 aa9.37□□□□□ -0.91
CTNND1-213ENST00000526357 TCF7L1Q9HCS4 588 aa9.37□□□□□ -0.91
CTNND1-213ENST00000526357 PCDHGA10Q9Y5H3 936 aa9.37□□□□□ -0.91
CTNND1-213ENST00000526357 KANTRA0A1W2PQU2 76 aa9.37□□□□□ -0.91
CTNND1-213ENST00000526357 PITPNM1O00562 1244 aa9.37□□□□□ -0.91
CTNND1-213ENST00000526357 AKAP8O43823 692 aaKnown RBP9.37□□□□□ -0.91
CTNND1-213ENST00000526357 IDSP22304 550 aa9.37□□□□□ -0.91
CTNND1-213ENST00000526357 GALK1P51570 392 aa9.37□□□□□ -0.91
CTNND1-213ENST00000526357 RGS8P57771 180 aaPredicted RBP9.37□□□□□ -0.91
CTNND1-213ENST00000526357 AUHQ13825 339 aaKnown RBP9.37□□□□□ -0.91
CTNND1-213ENST00000526357 PLA2G4EQ3MJ16 856 aa9.37□□□□□ -0.91
CTNND1-213ENST00000526357 CRY2Q49AN0 593 aa9.37□□□□□ -0.91
CTNND1-213ENST00000526357 NOMO2Q5JPE7 1267 aa9.37□□□□□ -0.91
CTNND1-213ENST00000526357 OR2T34Q8NGX1 318 aa9.37□□□□□ -0.91
CTNND1-213ENST00000526357 OR2T3Q8NH03 318 aa9.37□□□□□ -0.91
CTNND1-213ENST00000526357 NPAS2Q99743 824 aa9.37□□□□□ -0.91
CTNND1-213ENST00000526357 RNF121Q9H920 327 aa9.37□□□□□ -0.91
CTNND1-213ENST00000526357 NRCAMQ92823 1304 aa9.37□□□□□ -0.91
CTNND1-213ENST00000526357 JCADQ9P266 1359 aa9.37□□□□□ -0.91
CTNND1-213ENST00000526357 SLC33A1O00400 549 aaPredicted RBP9.37□□□□□ -0.91
CTNND1-213ENST00000526357 LSM1O15116 133 aaKnown RBP9.37□□□□□ -0.91
CTNND1-213ENST00000526357 MSCO60682 206 aa9.37□□□□□ -0.91
CTNND1-213ENST00000526357 UBXN7O94888 489 aa9.37□□□□□ -0.91
CTNND1-213ENST00000526357 BPNT1O95861 308 aa9.37□□□□□ -0.91
CTNND1-213ENST00000526357 TGFB2P61812 414 aa9.37□□□□□ -0.91
CTNND1-213ENST00000526357 C2orf80Q0P641 193 aa9.37□□□□□ -0.91
CTNND1-213ENST00000526357 TMEM44Q2T9K0 475 aa9.37□□□□□ -0.91
CTNND1-213ENST00000526357 LINGO2Q7L985 606 aa9.37□□□□□ -0.91
CTNND1-213ENST00000526357 FAM83AQ86UY5 434 aa9.37□□□□□ -0.91
CTNND1-213ENST00000526357 FAM47BQ8NA70 645 aa9.37□□□□□ -0.91
CTNND1-213ENST00000526357 PRICKLE1Q96MT3 831 aaPredicted RBP9.37□□□□□ -0.91
CTNND1-213ENST00000526357 AP1S3Q96PC3 154 aa9.37□□□□□ -0.91
CTNND1-213ENST00000526357 KLHL5Q96PQ7 755 aa9.37□□□□□ -0.91
CTNND1-213ENST00000526357 TLR10Q9BXR5 811 aa9.37□□□□□ -0.91
CTNND1-213ENST00000526357 KCNQ5Q9NR82 932 aa9.37□□□□□ -0.91
CTNND1-213ENST00000526357 COPS7AQ9UBW8 275 aa9.37□□□□□ -0.91
CTNND1-213ENST00000526357 PACSIN3Q9UKS6 424 aa9.37□□□□□ -0.91
CTNND1-213ENST00000526357 H0YJX3 145 aa9.36□□□□□ -0.91
CTNND1-213ENST00000526357 PCSK2P16519 638 aa9.36□□□□□ -0.91
CTNND1-213ENST00000526357 VARSP26640 1264 aaKnown RBP9.36□□□□□ -0.91
CTNND1-213ENST00000526357 MAGEA12P43365 314 aa9.36□□□□□ -0.91
CTNND1-213ENST00000526357 PNLIPRP1P54315 467 aa9.36□□□□□ -0.91
CTNND1-213ENST00000526357 GRSF1Q12849 480 aaKnown RBP eCLIP9.36□□□□□ -0.91
CTNND1-213ENST00000526357 TTMPQ5BVD1 217 aa9.36□□□□□ -0.91
CTNND1-213ENST00000526357 SLC30A10Q6XR72 485 aa9.36□□□□□ -0.91
CTNND1-213ENST00000526357 TMPRSS11BQ86T26 416 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms