RNA–Protein interactions for RNA: ENST00000525132.1

CSDE1-209, Transcript of cold shock domain containing E1, humanhuman

TSL 5

Gene CSDE1, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-209ENST00000525132 ROR1Q01973 937 aa3.2□□□□□ -1.9
CSDE1-209ENST00000525132 ERV3-1Q14264 604 aa3.2□□□□□ -1.9
CSDE1-209ENST00000525132 ATP2B3Q16720 1220 aa3.2□□□□□ -1.9
CSDE1-209ENST00000525132 NOMO2Q5JPE7 1267 aa3.2□□□□□ -1.9
CSDE1-209ENST00000525132 EEF1AKMT2Q5JPI9 291 aaKnown RBP3.2□□□□□ -1.9
CSDE1-209ENST00000525132 HEPHL1Q6MZM0 1159 aa3.2□□□□□ -1.9
CSDE1-209ENST00000525132 RINLQ6ZS11 566 aa3.2□□□□□ -1.9
CSDE1-209ENST00000525132 BBS12Q6ZW61 710 aa3.2□□□□□ -1.9
CSDE1-209ENST00000525132 B4GALNT4Q76KP1 1039 aa3.2□□□□□ -1.9
CSDE1-209ENST00000525132 KRT73Q86Y46 540 aa3.2□□□□□ -1.9
CSDE1-209ENST00000525132 RAB11FIP4Q86YS3 637 aa3.2□□□□□ -1.9
CSDE1-209ENST00000525132 NRSN1Q8IZ57 195 aa3.2□□□□□ -1.9
CSDE1-209ENST00000525132 TMEM57Q8N5G2 664 aa3.2□□□□□ -1.9
CSDE1-209ENST00000525132 ACBD4Q8NC06 268 aa3.2□□□□□ -1.9
CSDE1-209ENST00000525132 FAM98AQ8NCA5 519 aaKnown RBP3.2□□□□□ -1.9
CSDE1-209ENST00000525132 CEP70Q8NHQ1 597 aa3.2□□□□□ -1.9
CSDE1-209ENST00000525132 SAP25Q8TEE9 199 aa3.2□□□□□ -1.9
CSDE1-209ENST00000525132 LINC00476Q8WZB0 136 aa3.2□□□□□ -1.9
CSDE1-209ENST00000525132 GOLGA1Q92805 767 aa3.2□□□□□ -1.9
CSDE1-209ENST00000525132 Q96MF0 132 aa3.2□□□□□ -1.9
CSDE1-209ENST00000525132 KLHL32Q96NJ5 620 aa3.2□□□□□ -1.9
CSDE1-209ENST00000525132 TWNKQ96RR1 684 aa3.2□□□□□ -1.9
CSDE1-209ENST00000525132 MS4A7Q9GZW8 240 aaPredicted RBP3.2□□□□□ -1.9
CSDE1-209ENST00000525132 TP63Q9H3D4 680 aaPredicted RBP3.2□□□□□ -1.9
CSDE1-209ENST00000525132 ELAC1Q9H777 363 aaKnown RBP3.2□□□□□ -1.9
CSDE1-209ENST00000525132 ACAD9Q9H845 621 aa3.2□□□□□ -1.9
CSDE1-209ENST00000525132 VCPKMTQ9H867 229 aa3.2□□□□□ -1.9
CSDE1-209ENST00000525132 TRPV4Q9HBA0 871 aa3.2□□□□□ -1.9
CSDE1-209ENST00000525132 NOD2Q9HC29 1040 aa3.2□□□□□ -1.9
CSDE1-209ENST00000525132 CD93Q9NPY3 652 aa3.2□□□□□ -1.9
CSDE1-209ENST00000525132 HEYLQ9NQ87 328 aaPredicted RBP3.2□□□□□ -1.9
CSDE1-209ENST00000525132 PLSCR4Q9NRQ2 329 aa3.2□□□□□ -1.9
CSDE1-209ENST00000525132 KRT84Q9NSB2 600 aa3.2□□□□□ -1.9
CSDE1-209ENST00000525132 MRGBPQ9NV56 204 aa3.2□□□□□ -1.9
CSDE1-209ENST00000525132 CYP39A1Q9NYL5 469 aa3.2□□□□□ -1.9
CSDE1-209ENST00000525132 CTTNBP2NLQ9P2B4 639 aa3.2□□□□□ -1.9
CSDE1-209ENST00000525132 CFAP97Q9P2B7 532 aa3.2□□□□□ -1.9
CSDE1-209ENST00000525132 NFKBIL1Q9UBC1 381 aaPredicted RBP3.2□□□□□ -1.9
CSDE1-209ENST00000525132 LPAR3Q9UBY5 353 aa3.2□□□□□ -1.9
CSDE1-209ENST00000525132 DNAJB4Q9UDY4 337 aa3.2□□□□□ -1.9
CSDE1-209ENST00000525132 GIMAP2Q9UG22 337 aa3.2□□□□□ -1.9
CSDE1-209ENST00000525132 ZNHIT2Q9UHR6 403 aa3.2□□□□□ -1.9
CSDE1-209ENST00000525132 EIF2B4Q9UI10 523 aaKnown RBP3.2□□□□□ -1.9
CSDE1-209ENST00000525132 KCNE5Q9UJ90 142 aa3.2□□□□□ -1.9
CSDE1-209ENST00000525132 VPS28Q9UK41 221 aa3.2□□□□□ -1.9
CSDE1-209ENST00000525132 TBC1D30Q9Y2I9 924 aa3.2□□□□□ -1.9
CSDE1-209ENST00000525132 PLEKHM1Q9Y4G2 1056 aa3.2□□□□□ -1.9
CSDE1-209ENST00000525132 DTNAQ9Y4J8 743 aa3.2□□□□□ -1.9
CSDE1-209ENST00000525132 CYP46A1Q9Y6A2 500 aa3.2□□□□□ -1.9
CSDE1-209ENST00000525132 KIAA1549LQ6ZVL6 1849 aa3.19□□□□□ -1.9
CSDE1-209ENST00000525132 KIF26BQ2KJY2 2108 aa3.19□□□□□ -1.9
CSDE1-209ENST00000525132 USF3Q68DE3 2245 aa3.19□□□□□ -1.9
CSDE1-209ENST00000525132 A0A087WWL8 130 aa3.19□□□□□ -1.9
CSDE1-209ENST00000525132 TCRBV7S2A1N4TA0A589 114 aa3.19□□□□□ -1.9
CSDE1-209ENST00000525132 TCRBV21S2A2A0A5A6 115 aa3.19□□□□□ -1.9
CSDE1-209ENST00000525132 BICDL2A1A5D9 508 aa3.19□□□□□ -1.9
CSDE1-209ENST00000525132 CDHR4A6H8M9 788 aa3.19□□□□□ -1.9
CSDE1-209ENST00000525132 E7EVH7 732 aa3.19□□□□□ -1.9
CSDE1-209ENST00000525132 C3orf84H3BNL1 204 aa3.19□□□□□ -1.9
CSDE1-209ENST00000525132 COQ9O75208 318 aa3.19□□□□□ -1.9
CSDE1-209ENST00000525132 TMEM63AO94886 807 aa3.19□□□□□ -1.9
CSDE1-209ENST00000525132 INMTO95050 263 aa3.19□□□□□ -1.9
CSDE1-209ENST00000525132 C1RP00736 705 aa3.19□□□□□ -1.9
CSDE1-209ENST00000525132 DNTTP04053 509 aa3.19□□□□□ -1.9
CSDE1-209ENST00000525132 GRPP07492 148 aa3.19□□□□□ -1.9
CSDE1-209ENST00000525132 EGR2P11161 476 aaPredicted RBP3.19□□□□□ -1.9
CSDE1-209ENST00000525132 LIFP15018 202 aa3.19□□□□□ -1.9
CSDE1-209ENST00000525132 PECAM1P16284 738 aaPredicted RBP3.19□□□□□ -1.9
CSDE1-209ENST00000525132 FGFR4P22455 802 aa3.19□□□□□ -1.9
CSDE1-209ENST00000525132 CHMP24386 653 aa3.19□□□□□ -1.9
CSDE1-209ENST00000525132 ACVR2AP27037 513 aa3.19□□□□□ -1.9
CSDE1-209ENST00000525132 OAS2P29728 719 aaKnown RBP3.19□□□□□ -1.9
CSDE1-209ENST00000525132 ATICP31939 592 aa3.19□□□□□ -1.9
CSDE1-209ENST00000525132 HNRNPH3P31942 346 aaKnown RBP3.19□□□□□ -1.9
CSDE1-209ENST00000525132 PTGS2P35354 604 aa3.19□□□□□ -1.9
CSDE1-209ENST00000525132 HOXD13P35453 343 aa3.19□□□□□ -1.9
CSDE1-209ENST00000525132 CCR2P41597 374 aa3.19□□□□□ -1.9
CSDE1-209ENST00000525132 SLC11A1P49279 550 aa3.19□□□□□ -1.9
CSDE1-209ENST00000525132 TOB1P50616 345 aaPredicted RBP3.19□□□□□ -1.9
CSDE1-209ENST00000525132 ALDH18A1P54886 795 aaKnown RBP3.19□□□□□ -1.9
CSDE1-209ENST00000525132 RAP2BP61225 183 aa3.19□□□□□ -1.9
CSDE1-209ENST00000525132 PSMC1P62191 440 aaKnown RBP3.19□□□□□ -1.9
CSDE1-209ENST00000525132 GRIK3Q13003 919 aa3.19□□□□□ -1.9
CSDE1-209ENST00000525132 CUL4AQ13619 759 aa3.19□□□□□ -1.9
CSDE1-209ENST00000525132 ACOX1Q15067 660 aa3.19□□□□□ -1.9
CSDE1-209ENST00000525132 PLCB4Q15147 1175 aa3.19□□□□□ -1.9
CSDE1-209ENST00000525132 ANKRD1Q15327 319 aa3.19□□□□□ -1.9
CSDE1-209ENST00000525132 RILPL1Q5EBL4 403 aa3.19□□□□□ -1.9
CSDE1-209ENST00000525132 FAXCQ5TGI0 409 aa3.19□□□□□ -1.9
CSDE1-209ENST00000525132 LIN9Q5TKA1 542 aa3.19□□□□□ -1.9
CSDE1-209ENST00000525132 PLAG1Q6DJT9 500 aa3.19□□□□□ -1.9
CSDE1-209ENST00000525132 ARMC6Q6NXE6 501 aa3.19□□□□□ -1.9
CSDE1-209ENST00000525132 MED25Q71SY5 747 aa3.19□□□□□ -1.9
CSDE1-209ENST00000525132 TRMT1LQ7Z2T5 733 aaKnown RBP3.19□□□□□ -1.9
CSDE1-209ENST00000525132 UBE3BQ7Z3V4 1068 aa3.19□□□□□ -1.9
CSDE1-209ENST00000525132 HAUS6Q7Z4H7 955 aa3.19□□□□□ -1.9
CSDE1-209ENST00000525132 R3HCC1LQ7Z5L2 792 aaKnown RBP3.19□□□□□ -1.9
CSDE1-209ENST00000525132 PPP1R32Q7Z5V6 425 aa3.19□□□□□ -1.9
CSDE1-209ENST00000525132 ANKS1BQ7Z6G8 1248 aa3.19□□□□□ -1.9
CSDE1-209ENST00000525132 USP37Q86T82 979 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms