RNA–Protein interactions for RNA: ENST00000524955.1

CHMP4A-202, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 268 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-202ENST00000524955 GULP1Q9UBP9 304 aa4.56□□□□□ -1.68
CHMP4A-202ENST00000524955 RNF14Q9UBS8 474 aa4.56□□□□□ -1.68
CHMP4A-202ENST00000524955 SLC23A2Q9UGH3 650 aa4.56□□□□□ -1.68
CHMP4A-202ENST00000524955 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.56□□□□□ -1.68
CHMP4A-202ENST00000524955 APOBEC3BQ9UH17 382 aaKnown RBP4.56□□□□□ -1.68
CHMP4A-202ENST00000524955 DMGDHQ9UI17 866 aaKnown RBP4.56□□□□□ -1.68
CHMP4A-202ENST00000524955 CRLS1Q9UJA2 301 aa4.56□□□□□ -1.68
CHMP4A-202ENST00000524955 TSR3Q9UJK0 312 aaKnown RBP4.56□□□□□ -1.68
CHMP4A-202ENST00000524955 CHMP2BQ9UQN3 213 aa4.56□□□□□ -1.68
CHMP4A-202ENST00000524955 KCNK6Q9Y257 313 aa4.56□□□□□ -1.68
CHMP4A-202ENST00000524955 DNAJC16Q9Y2G8 782 aa4.56□□□□□ -1.68
CHMP4A-202ENST00000524955 TCAF1Q9Y4C2 921 aa4.56□□□□□ -1.68
CHMP4A-202ENST00000524955 PRSS21Q9Y6M0 314 aa4.56□□□□□ -1.68
CHMP4A-202ENST00000524955 SLC30A1Q9Y6M5 507 aa4.56□□□□□ -1.68
CHMP4A-202ENST00000524955 V9GYY5 206 aaPredicted RBP4.56□□□□□ -1.68
CHMP4A-202ENST00000524955 CUL9Q8IWT3 2517 aa4.56□□□□□ -1.68
CHMP4A-202ENST00000524955 ABCA7Q8IZY2 2146 aa4.55□□□□□ -1.68
CHMP4A-202ENST00000524955 THADAQ6YHU6 1953 aa4.55□□□□□ -1.68
CHMP4A-202ENST00000524955 PRAMEF33A0A0G2JMD5 474 aa4.55□□□□□ -1.68
CHMP4A-202ENST00000524955 HEATR9A2RTY3 570 aa4.55□□□□□ -1.68
CHMP4A-202ENST00000524955 FAM187AA6NFU0 413 aa4.55□□□□□ -1.68
CHMP4A-202ENST00000524955 SDR42E2A6NKP2 422 aa4.55□□□□□ -1.68
CHMP4A-202ENST00000524955 ERI2A8K979 691 aaKnown RBP4.55□□□□□ -1.68
CHMP4A-202ENST00000524955 IQCF5A8MTL0 148 aa4.55□□□□□ -1.68
CHMP4A-202ENST00000524955 B4DGG1 531 aa4.55□□□□□ -1.68
CHMP4A-202ENST00000524955 KIF2AO00139 706 aaPredicted RBP4.55□□□□□ -1.68
CHMP4A-202ENST00000524955 YY2O15391 372 aa4.55□□□□□ -1.68
CHMP4A-202ENST00000524955 AQP9O43315 295 aa4.55□□□□□ -1.68
CHMP4A-202ENST00000524955 GRID2O43424 1007 aa4.55□□□□□ -1.68
CHMP4A-202ENST00000524955 SIGLEC6O43699 453 aa4.55□□□□□ -1.68
CHMP4A-202ENST00000524955 ZNF500O60304 480 aaPredicted RBP4.55□□□□□ -1.68
CHMP4A-202ENST00000524955 DNAJC6O75061 913 aa4.55□□□□□ -1.68
CHMP4A-202ENST00000524955 ZNF189O75820 626 aaPredicted RBP4.55□□□□□ -1.68
CHMP4A-202ENST00000524955 CDK14O94921 469 aa4.55□□□□□ -1.68
CHMP4A-202ENST00000524955 SEC31AO94979 1220 aaKnown RBP4.55□□□□□ -1.68
CHMP4A-202ENST00000524955 CER1O95813 267 aa4.55□□□□□ -1.68
CHMP4A-202ENST00000524955 CSF2P04141 144 aa4.55□□□□□ -1.68
CHMP4A-202ENST00000524955 POLBP06746 335 aa4.55□□□□□ -1.68
CHMP4A-202ENST00000524955 GIMD1P0DJR0 217 aa4.55□□□□□ -1.68
CHMP4A-202ENST00000524955 ERVK-10P10266 1014 aa4.55□□□□□ -1.68
CHMP4A-202ENST00000524955 NME1P15531 152 aaKnown RBP4.55□□□□□ -1.68
CHMP4A-202ENST00000524955 MSH3P20585 1137 aa4.55□□□□□ -1.68
CHMP4A-202ENST00000524955 ARNTP27540 789 aa4.55□□□□□ -1.68
CHMP4A-202ENST00000524955 FOXN2P32314 431 aa4.55□□□□□ -1.68
CHMP4A-202ENST00000524955 NUDT1P36639 197 aa4.55□□□□□ -1.68
CHMP4A-202ENST00000524955 ELK3P41970 407 aa4.55□□□□□ -1.68
CHMP4A-202ENST00000524955 DPP6P42658 865 aa4.55□□□□□ -1.68
CHMP4A-202ENST00000524955 MAGEA6P43360 314 aa4.55□□□□□ -1.68
CHMP4A-202ENST00000524955 NPY2RP49146 381 aa4.55□□□□□ -1.68
CHMP4A-202ENST00000524955 ARRB1P49407 418 aaPredicted RBP4.55□□□□□ -1.68
CHMP4A-202ENST00000524955 CARSP49589 748 aaKnown RBP4.55□□□□□ -1.68
CHMP4A-202ENST00000524955 CCT8P50990 548 aa4.55□□□□□ -1.68
CHMP4A-202ENST00000524955 HK3P52790 923 aa4.55□□□□□ -1.68
CHMP4A-202ENST00000524955 PGGT1BP53609 377 aa4.55□□□□□ -1.68
CHMP4A-202ENST00000524955 DRG2P55039 364 aaKnown RBP4.55□□□□□ -1.68
CHMP4A-202ENST00000524955 CSE1LP55060 971 aaKnown RBP4.55□□□□□ -1.68
CHMP4A-202ENST00000524955 MAZP56270 477 aaKnown RBP4.55□□□□□ -1.68
CHMP4A-202ENST00000524955 KIAA1024LP59773 190 aa4.55□□□□□ -1.68
CHMP4A-202ENST00000524955 DCDC1P59894 354 aa4.55□□□□□ -1.68
CHMP4A-202ENST00000524955 YPEL5P62699 121 aa4.55□□□□□ -1.68
CHMP4A-202ENST00000524955 PRAMEP78395 509 aa4.55□□□□□ -1.68
CHMP4A-202ENST00000524955 SARNPP82979 210 aaKnown RBP4.55□□□□□ -1.68
CHMP4A-202ENST00000524955 B4GALNT1Q00973 533 aa4.55□□□□□ -1.68
CHMP4A-202ENST00000524955 CTBSQ01459 385 aa4.55□□□□□ -1.68
CHMP4A-202ENST00000524955 OVGP1Q12889 678 aa4.55□□□□□ -1.68
CHMP4A-202ENST00000524955 TMEM115Q12893 351 aaPredicted RBP4.55□□□□□ -1.68
CHMP4A-202ENST00000524955 PDIA2Q13087 525 aaKnown RBP4.55□□□□□ -1.68
CHMP4A-202ENST00000524955 CTBP1Q13363 440 aa4.55□□□□□ -1.68
CHMP4A-202ENST00000524955 NFATC2Q13469 925 aa4.55□□□□□ -1.68
CHMP4A-202ENST00000524955 PTK2BQ14289 1009 aa4.55□□□□□ -1.68
CHMP4A-202ENST00000524955 DBN1Q16643 649 aa4.55□□□□□ -1.68
CHMP4A-202ENST00000524955 SKIDA1Q1XH10 827 aa4.55□□□□□ -1.68
CHMP4A-202ENST00000524955 ANKRD20A4Q4UJ75 823 aa4.55□□□□□ -1.68
CHMP4A-202ENST00000524955 PYCR3Q53H96 274 aa4.55□□□□□ -1.68
CHMP4A-202ENST00000524955 ZNF789Q5FWF6 425 aa4.55□□□□□ -1.68
CHMP4A-202ENST00000524955 TRMT10BQ6PF06 316 aaKnown RBP4.55□□□□□ -1.68
CHMP4A-202ENST00000524955 TMEM220Q6QAJ8 160 aa4.55□□□□□ -1.68
CHMP4A-202ENST00000524955 ZDHHC24Q6UX98 284 aa4.55□□□□□ -1.68
CHMP4A-202ENST00000524955 C4orf22Q6V702 233 aa4.55□□□□□ -1.68
CHMP4A-202ENST00000524955 FAM83HQ6ZRV2 1179 aaPredicted RBP4.55□□□□□ -1.68
CHMP4A-202ENST00000524955 SYDE1Q6ZW31 735 aaPredicted RBP4.55□□□□□ -1.68
CHMP4A-202ENST00000524955 ZNF765Q7L2R6 523 aa4.55□□□□□ -1.68
CHMP4A-202ENST00000524955 KANSL1Q7Z3B3 1105 aa4.55□□□□□ -1.68
CHMP4A-202ENST00000524955 ZNF572Q7Z3I7 529 aaPredicted RBP4.55□□□□□ -1.68
CHMP4A-202ENST00000524955 MAATS1Q7Z4T9 603 aa4.55□□□□□ -1.68
CHMP4A-202ENST00000524955 RABEPKQ7Z6M1 372 aa4.55□□□□□ -1.68
CHMP4A-202ENST00000524955 TAF8Q7Z7C8 310 aa4.55□□□□□ -1.68
CHMP4A-202ENST00000524955 IQCHQ86VS3 1027 aa4.55□□□□□ -1.68
CHMP4A-202ENST00000524955 SERPINA9Q86WD7 417 aa4.55□□□□□ -1.68
CHMP4A-202ENST00000524955 ZNF761Q86XN6 746 aaPredicted RBP4.55□□□□□ -1.68
CHMP4A-202ENST00000524955 NRROSQ86YC3 692 aa4.55□□□□□ -1.68
CHMP4A-202ENST00000524955 TRAPPC5Q8IUR0 188 aa4.55□□□□□ -1.68
CHMP4A-202ENST00000524955 PHYKPLQ8IUZ5 450 aa4.55□□□□□ -1.68
CHMP4A-202ENST00000524955 ZNF547Q8IVP9 402 aa4.55□□□□□ -1.68
CHMP4A-202ENST00000524955 NAXDQ8IW45 347 aa4.55□□□□□ -1.68
CHMP4A-202ENST00000524955 DENND6AQ8IWF6 608 aa4.55□□□□□ -1.68
CHMP4A-202ENST00000524955 KRT222Q8N1A0 295 aa4.55□□□□□ -1.68
CHMP4A-202ENST00000524955 MMGT1Q8N4V1 131 aa4.55□□□□□ -1.68
CHMP4A-202ENST00000524955 LILRA3Q8N6C8 439 aaPredicted RBP4.55□□□□□ -1.68
CHMP4A-202ENST00000524955 FBXO36Q8NEA4 188 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms