RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 CD93Q9NPY3 652 aa3.14□□□□□ -1.91
CSDE1-208ENST00000524652 OLFML3Q9NRN5 406 aa3.14□□□□□ -1.91
CSDE1-208ENST00000524652 PANK4Q9NVE7 773 aa3.14□□□□□ -1.91
CSDE1-208ENST00000524652 KCND2Q9NZV8 630 aa3.14□□□□□ -1.91
CSDE1-208ENST00000524652 WNT16Q9UBV4 365 aa3.14□□□□□ -1.91
CSDE1-208ENST00000524652 MAN1B1Q9UKM7 699 aa3.14□□□□□ -1.91
CSDE1-208ENST00000524652 UTS2RQ9UKP6 389 aa3.14□□□□□ -1.91
CSDE1-208ENST00000524652 ODF2LQ9ULJ1 636 aa3.14□□□□□ -1.91
CSDE1-208ENST00000524652 PADI3Q9ULW8 664 aa3.14□□□□□ -1.91
CSDE1-208ENST00000524652 LAMP3Q9UQV4 416 aa3.14□□□□□ -1.91
CSDE1-208ENST00000524652 GINS2Q9Y248 185 aa3.14□□□□□ -1.91
CSDE1-208ENST00000524652 UBE2J1Q9Y385 318 aaPredicted RBP3.14□□□□□ -1.91
CSDE1-208ENST00000524652 TRPV2Q9Y5S1 764 aa3.14□□□□□ -1.91
CSDE1-208ENST00000524652 TCF20Q9UGU0 1960 aaKnown RBP3.14□□□□□ -1.91
CSDE1-208ENST00000524652 PHLPP2Q6ZVD8 1323 aa3.14□□□□□ -1.91
CSDE1-208ENST00000524652 DMDP11532 3685 aa3.14□□□□□ -1.91
CSDE1-208ENST00000524652 MYO16Q9Y6X6 1858 aa3.13□□□□□ -1.91
CSDE1-208ENST00000524652 PVALEFA0A1B0GWK0 134 aa3.13□□□□□ -1.91
CSDE1-208ENST00000524652 GXYLT2A0PJZ3 443 aa3.13□□□□□ -1.91
CSDE1-208ENST00000524652 DENND3A2RUS2 1198 aa3.13□□□□□ -1.91
CSDE1-208ENST00000524652 TRIM49BA6NDI0 452 aa3.13□□□□□ -1.91
CSDE1-208ENST00000524652 GOLGA6L4A6NEF3 574 aa3.13□□□□□ -1.91
CSDE1-208ENST00000524652 POM121BA6NF01 834 aa3.13□□□□□ -1.91
CSDE1-208ENST00000524652 CCDC169A6NNP5 214 aa3.13□□□□□ -1.91
CSDE1-208ENST00000524652 K7ENM7 598 aa3.13□□□□□ -1.91
CSDE1-208ENST00000524652 RHODO00212 210 aa3.13□□□□□ -1.91
CSDE1-208ENST00000524652 ACOT8O14734 319 aa3.13□□□□□ -1.91
CSDE1-208ENST00000524652 CLIC2O15247 247 aa3.13□□□□□ -1.91
CSDE1-208ENST00000524652 TGFB1I1O43294 461 aa3.13□□□□□ -1.91
CSDE1-208ENST00000524652 RPS6KA5O75582 802 aa3.13□□□□□ -1.91
CSDE1-208ENST00000524652 KRT38O76015 456 aa3.13□□□□□ -1.91
CSDE1-208ENST00000524652 GCNT3O95395 438 aa3.13□□□□□ -1.91
CSDE1-208ENST00000524652 PIGRP01833 764 aa3.13□□□□□ -1.91
CSDE1-208ENST00000524652 LINC00271P0C7V0 271 aa3.13□□□□□ -1.91
CSDE1-208ENST00000524652 TGM2P21980 687 aa3.13□□□□□ -1.91
CSDE1-208ENST00000524652 TMOD1P28289 359 aa3.13□□□□□ -1.91
CSDE1-208ENST00000524652 ADSSP30520 456 aa3.13□□□□□ -1.91
CSDE1-208ENST00000524652 TNFSF9P41273 254 aa3.13□□□□□ -1.91
CSDE1-208ENST00000524652 PRCPP42785 496 aa3.13□□□□□ -1.91
CSDE1-208ENST00000524652 NAMPTP43490 491 aa3.13□□□□□ -1.91
CSDE1-208ENST00000524652 CRYBB1P53674 252 aaPredicted RBP3.13□□□□□ -1.91
CSDE1-208ENST00000524652 DEFB103AP81534 67 aa3.13□□□□□ -1.91
CSDE1-208ENST00000524652 GAD2Q05329 585 aa3.13□□□□□ -1.91
CSDE1-208ENST00000524652 POU5F1BQ06416 359 aa3.13□□□□□ -1.91
CSDE1-208ENST00000524652 LTBQ06643 244 aa3.13□□□□□ -1.91
CSDE1-208ENST00000524652 HYAL1Q12794 435 aa3.13□□□□□ -1.91
CSDE1-208ENST00000524652 KEAP1Q14145 624 aa3.13□□□□□ -1.91
CSDE1-208ENST00000524652 MORC3Q14149 939 aa3.13□□□□□ -1.91
CSDE1-208ENST00000524652 MXD4Q14582 209 aaPredicted RBP3.13□□□□□ -1.91
CSDE1-208ENST00000524652 SHHQ15465 462 aa3.13□□□□□ -1.91
CSDE1-208ENST00000524652 KLHL40Q2TBA0 621 aa3.13□□□□□ -1.91
CSDE1-208ENST00000524652 DPCR1Q3MIW9 517 aa3.13□□□□□ -1.91
CSDE1-208ENST00000524652 ZCWPW2Q504Y3 356 aa3.13□□□□□ -1.91
CSDE1-208ENST00000524652 HERC4Q5GLZ8 1057 aaPredicted RBP3.13□□□□□ -1.91
CSDE1-208ENST00000524652 RAP1GAP2Q684P5 730 aa3.13□□□□□ -1.91
CSDE1-208ENST00000524652 CAPRIN2Q6IMN6 1127 aaKnown RBP3.13□□□□□ -1.91
CSDE1-208ENST00000524652 CAVIN1Q6NZI2 390 aaKnown RBP3.13□□□□□ -1.91
CSDE1-208ENST00000524652 C11orf57Q6ZUT1 292 aaPredicted RBP3.13□□□□□ -1.91
CSDE1-208ENST00000524652 HAUS6Q7Z4H7 955 aa3.13□□□□□ -1.91
CSDE1-208ENST00000524652 ZNF410Q86VK4 478 aa3.13□□□□□ -1.91
CSDE1-208ENST00000524652 NELFCDQ8IXH7 590 aa3.13□□□□□ -1.91
CSDE1-208ENST00000524652 CEP57L1Q8IYX8 460 aa3.13□□□□□ -1.91
CSDE1-208ENST00000524652 NME8Q8N427 588 aa3.13□□□□□ -1.91
CSDE1-208ENST00000524652 MYCT1Q8N699 235 aa3.13□□□□□ -1.91
CSDE1-208ENST00000524652 TTC8Q8TAM2 541 aa3.13□□□□□ -1.91
CSDE1-208ENST00000524652 ELP5Q8TE02 316 aa3.13□□□□□ -1.91
CSDE1-208ENST00000524652 TMEM174Q8WUU8 243 aa3.13□□□□□ -1.91
CSDE1-208ENST00000524652 TCP11Q8WWU5 503 aa3.13□□□□□ -1.91
CSDE1-208ENST00000524652 KIFAP3Q92845 792 aa3.13□□□□□ -1.91
CSDE1-208ENST00000524652 MED30Q96HR3 178 aa3.13□□□□□ -1.91
CSDE1-208ENST00000524652 CCDC43Q96MW1 224 aaKnown RBP3.13□□□□□ -1.91
CSDE1-208ENST00000524652 GPR78Q96P69 363 aa3.13□□□□□ -1.91
CSDE1-208ENST00000524652 MAP7D2Q96T17 732 aa3.13□□□□□ -1.91
CSDE1-208ENST00000524652 TIPINQ9BVW5 301 aa3.13□□□□□ -1.91
CSDE1-208ENST00000524652 ELOVL1Q9BW60 279 aa3.13□□□□□ -1.91
CSDE1-208ENST00000524652 IFIH1Q9BYX4 1025 aaKnown RBP3.13□□□□□ -1.91
CSDE1-208ENST00000524652 PCDHAC1Q9H158 963 aa3.13□□□□□ -1.91
CSDE1-208ENST00000524652 NXF3Q9H4D5 531 aaKnown RBP3.13□□□□□ -1.91
CSDE1-208ENST00000524652 ST6GALNAC4Q9H4F1 302 aa3.13□□□□□ -1.91
CSDE1-208ENST00000524652 ZHX3Q9H4I2 956 aa3.13□□□□□ -1.91
CSDE1-208ENST00000524652 PDZD7Q9H5P4 517 aa3.13□□□□□ -1.91
CSDE1-208ENST00000524652 MAGEF1Q9HAY2 307 aa3.13□□□□□ -1.91
CSDE1-208ENST00000524652 PTPRHQ9HD43 1115 aa3.13□□□□□ -1.91
CSDE1-208ENST00000524652 KCNK9Q9NPC2 374 aa3.13□□□□□ -1.91
CSDE1-208ENST00000524652 AGPAT5Q9NUQ2 364 aa3.13□□□□□ -1.91
CSDE1-208ENST00000524652 MIOSQ9NXC5 875 aa3.13□□□□□ -1.91
CSDE1-208ENST00000524652 PLK2Q9NYY3 685 aa3.13□□□□□ -1.91
CSDE1-208ENST00000524652 CACNG4Q9UBN1 327 aa3.13□□□□□ -1.91
CSDE1-208ENST00000524652 SLC8A2Q9UPR5 921 aa3.13□□□□□ -1.91
CSDE1-208ENST00000524652 B3GNT3Q9Y2A9 372 aa3.13□□□□□ -1.91
CSDE1-208ENST00000524652 PCDHB7Q9Y5E2 793 aa3.13□□□□□ -1.91
CSDE1-208ENST00000524652 PATJQ8NI35 1801 aa3.13□□□□□ -1.91
CSDE1-208ENST00000524652 ANAPC1Q9H1A4 1944 aa3.13□□□□□ -1.91
CSDE1-208ENST00000524652 MYO18BQ8IUG5 2567 aa3.12□□□□□ -1.91
CSDE1-208ENST00000524652 BRWD1Q9NSI6 2320 aa3.12□□□□□ -1.91
CSDE1-208ENST00000524652 VPS13AQ96RL7 3174 aa3.12□□□□□ -1.91
CSDE1-208ENST00000524652 A0A1B0GUA9 196 aa3.12□□□□□ -1.91
CSDE1-208ENST00000524652 RPS10-NUDT3A0A1W2PQS6 291 aa3.12□□□□□ -1.91
CSDE1-208ENST00000524652 SYCE3A1L190 88 aa3.12□□□□□ -1.91
CSDE1-208ENST00000524652 GOLGA8IPA6NC78 632 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms