RNA–Protein interactions for RNA: ENST00000524454.1

VPS11-201, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS11, Length 626 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-201ENST00000524454 ABL2P42684 1182 aa7.05□□□□□ -1.28
VPS11-201ENST00000524454 SLC1A2P43004 574 aa7.05□□□□□ -1.28
VPS11-201ENST00000524454 DHPSP49366 369 aaPredicted RBP7.05□□□□□ -1.28
VPS11-201ENST00000524454 STK19P49842 368 aaPredicted RBP7.05□□□□□ -1.28
VPS11-201ENST00000524454 SUOXP51687 545 aa7.05□□□□□ -1.28
VPS11-201ENST00000524454 ZNF140P52738 457 aaPredicted RBP7.05□□□□□ -1.28
VPS11-201ENST00000524454 RAB10P61026 200 aa7.05□□□□□ -1.28
VPS11-201ENST00000524454 PRAMEP78395 509 aa7.05□□□□□ -1.28
VPS11-201ENST00000524454 ARF5P84085 180 aa7.05□□□□□ -1.28
VPS11-201ENST00000524454 DSC2Q02487 901 aa7.05□□□□□ -1.28
VPS11-201ENST00000524454 CREB5Q02930 508 aa7.05□□□□□ -1.28
VPS11-201ENST00000524454 ITKQ08881 620 aa7.05□□□□□ -1.28
VPS11-201ENST00000524454 IFT88Q13099 833 aa7.05□□□□□ -1.28
VPS11-201ENST00000524454 BMPR2Q13873 1038 aa7.05□□□□□ -1.28
VPS11-201ENST00000524454 CNGA3Q16281 694 aa7.05□□□□□ -1.28
VPS11-201ENST00000524454 MAP7D1Q3KQU3 841 aa7.05□□□□□ -1.28
VPS11-201ENST00000524454 GALNTL6Q49A17 601 aa7.05□□□□□ -1.28
VPS11-201ENST00000524454 HSF5Q4G112 596 aaPredicted RBP7.05□□□□□ -1.28
VPS11-201ENST00000524454 USP39Q53GS9 565 aaKnown RBP7.05□□□□□ -1.28
VPS11-201ENST00000524454 RNF219Q5W0B1 726 aaPredicted RBP7.05□□□□□ -1.28
VPS11-201ENST00000524454 ZNF470Q6ECI4 717 aa7.05□□□□□ -1.28
VPS11-201ENST00000524454 CGB2Q6NT52 195 aa7.05□□□□□ -1.28
VPS11-201ENST00000524454 ESRP1Q6NXG1 681 aaKnown RBP7.05□□□□□ -1.28
VPS11-201ENST00000524454 FOXR1Q6PIV2 292 aa7.05□□□□□ -1.28
VPS11-201ENST00000524454 AFTPHQ6ULP2 937 aa7.05□□□□□ -1.28
VPS11-201ENST00000524454 SERPINA13PQ6UXR4 307 aa7.05□□□□□ -1.28
VPS11-201ENST00000524454 CDHR3Q6ZTQ4 885 aa7.05□□□□□ -1.28
VPS11-201ENST00000524454 OTOAQ7RTW8 1153 aa7.05□□□□□ -1.28
VPS11-201ENST00000524454 FAM124AQ86V42 546 aa7.05□□□□□ -1.28
VPS11-201ENST00000524454 CILP2Q8IUL8 1156 aa7.05□□□□□ -1.28
VPS11-201ENST00000524454 NUDCD3Q8IVD9 361 aa7.05□□□□□ -1.28
VPS11-201ENST00000524454 RAVER1Q8IY67 606 aaKnown RBP7.05□□□□□ -1.28
VPS11-201ENST00000524454 CCDC63Q8NA47 563 aa7.05□□□□□ -1.28
VPS11-201ENST00000524454 OR7D4Q8NG98 312 aa7.05□□□□□ -1.28
VPS11-201ENST00000524454 DTX3LQ8TDB6 740 aa7.05□□□□□ -1.28
VPS11-201ENST00000524454 UCMAQ8WVF2 138 aa7.05□□□□□ -1.28
VPS11-201ENST00000524454 C10orf82Q8WW14 230 aa7.05□□□□□ -1.28
VPS11-201ENST00000524454 MRRFQ96E11 262 aaKnown RBP7.05□□□□□ -1.28
VPS11-201ENST00000524454 LMLNQ96KR4 655 aa7.05□□□□□ -1.28
VPS11-201ENST00000524454 MRGPRX1Q96LB2 322 aa7.05□□□□□ -1.28
VPS11-201ENST00000524454 LYSMD1Q96S90 227 aa7.05□□□□□ -1.28
VPS11-201ENST00000524454 GABRG3Q99928 467 aa7.05□□□□□ -1.28
VPS11-201ENST00000524454 PAIP2Q9BPZ3 127 aaKnown RBP7.05□□□□□ -1.28
VPS11-201ENST00000524454 TRIM56Q9BRZ2 755 aaKnown RBP7.05□□□□□ -1.28
VPS11-201ENST00000524454 MKRN2Q9H000 416 aaKnown RBP7.05□□□□□ -1.28
VPS11-201ENST00000524454 RASSF4Q9H2L5 321 aa7.05□□□□□ -1.28
VPS11-201ENST00000524454 UGT1A7Q9HAW7 530 aa7.05□□□□□ -1.28
VPS11-201ENST00000524454 UGT1A10Q9HAW8 530 aa7.05□□□□□ -1.28
VPS11-201ENST00000524454 UGT1A8Q9HAW9 530 aa7.05□□□□□ -1.28
VPS11-201ENST00000524454 MAGEE1Q9HCI5 957 aa7.05□□□□□ -1.28
VPS11-201ENST00000524454 FSCN3Q9NQT6 498 aa7.05□□□□□ -1.28
VPS11-201ENST00000524454 SAR1AQ9NR31 198 aa7.05□□□□□ -1.28
VPS11-201ENST00000524454 RXFP3Q9NSD7 469 aa7.05□□□□□ -1.28
VPS11-201ENST00000524454 IARS2Q9NSE4 1012 aaKnown RBP7.05□□□□□ -1.28
VPS11-201ENST00000524454 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.05□□□□□ -1.28
VPS11-201ENST00000524454 THAP10Q9P2Z0 257 aaPredicted RBP7.05□□□□□ -1.28
VPS11-201ENST00000524454 COPG2Q9UBF2 871 aa7.05□□□□□ -1.28
VPS11-201ENST00000524454 HAO1Q9UJM8 370 aa7.05□□□□□ -1.28
VPS11-201ENST00000524454 VPS28Q9UK41 221 aa7.05□□□□□ -1.28
VPS11-201ENST00000524454 HS3ST2Q9Y278 367 aa7.05□□□□□ -1.28
VPS11-201ENST00000524454 MTO1Q9Y2Z2 717 aaKnown RBP7.05□□□□□ -1.28
VPS11-201ENST00000524454 ACOT9Q9Y305 439 aa7.05□□□□□ -1.28
VPS11-201ENST00000524454 IGHV1OR15-9A0A0B4J2B8 117 aa7.04□□□□□ -1.28
VPS11-201ENST00000524454 CCDC163A0A0D9SF12 145 aa7.04□□□□□ -1.28
VPS11-201ENST00000524454 TTC34A8MYJ7 566 aa7.04□□□□□ -1.28
VPS11-201ENST00000524454 FOXO6A8MYZ6 492 aa7.04□□□□□ -1.28
VPS11-201ENST00000524454 F5H423 210 aaPredicted RBP7.04□□□□□ -1.28
VPS11-201ENST00000524454 SLCO1B7G3V0H7 640 aa7.04□□□□□ -1.28
VPS11-201ENST00000524454 GOLGA8RI6L899 631 aa7.04□□□□□ -1.28
VPS11-201ENST00000524454 CBX4O00257 560 aa7.04□□□□□ -1.28
VPS11-201ENST00000524454 MUSKO15146 869 aa7.04□□□□□ -1.28
VPS11-201ENST00000524454 HTRA2O43464 458 aaPredicted RBP7.04□□□□□ -1.28
VPS11-201ENST00000524454 SYNCRIPO60506 623 aaKnown RBP7.04□□□□□ -1.28
VPS11-201ENST00000524454 DNAJC8O75937 253 aaPredicted RBP7.04□□□□□ -1.28
VPS11-201ENST00000524454 KLHL2O95198 593 aa7.04□□□□□ -1.28
VPS11-201ENST00000524454 EPN2O95208 641 aa7.04□□□□□ -1.28
VPS11-201ENST00000524454 CD160O95971 181 aa7.04□□□□□ -1.28
VPS11-201ENST00000524454 C2P06681 752 aa7.04□□□□□ -1.28
VPS11-201ENST00000524454 DLDP09622 509 aaKnown RBP7.04□□□□□ -1.28
VPS11-201ENST00000524454 SLC35E2BP0CK96 405 aa7.04□□□□□ -1.28
VPS11-201ENST00000524454 POLR2EP19388 210 aaKnown RBP7.04□□□□□ -1.28
VPS11-201ENST00000524454 LPOP22079 712 aaPredicted RBP7.04□□□□□ -1.28
VPS11-201ENST00000524454 NFKBIAP25963 317 aa7.04□□□□□ -1.28
VPS11-201ENST00000524454 PPARGP37231 505 aaPredicted RBP7.04□□□□□ -1.28
VPS11-201ENST00000524454 MPLP40238 635 aa7.04□□□□□ -1.28
VPS11-201ENST00000524454 PTGER3P43115 390 aa7.04□□□□□ -1.28
VPS11-201ENST00000524454 RASSF2P50749 326 aa7.04□□□□□ -1.28
VPS11-201ENST00000524454 STC1P52823 247 aa7.04□□□□□ -1.28
VPS11-201ENST00000524454 COPAP53621 1224 aa7.04□□□□□ -1.28
VPS11-201ENST00000524454 SLC12A2P55011 1212 aa7.04□□□□□ -1.28
VPS11-201ENST00000524454 DNAJB13P59910 316 aa7.04□□□□□ -1.28
VPS11-201ENST00000524454 ACTN3Q08043 901 aaPredicted RBP7.04□□□□□ -1.28
VPS11-201ENST00000524454 GALNT1Q10472 559 aaPredicted RBP7.04□□□□□ -1.28
VPS11-201ENST00000524454 OLIG2Q13516 323 aa7.04□□□□□ -1.28
VPS11-201ENST00000524454 STARD3Q14849 445 aa7.04□□□□□ -1.28
VPS11-201ENST00000524454 PCLAFQ15004 111 aa7.04□□□□□ -1.28
VPS11-201ENST00000524454 CYTH1Q15438 398 aa7.04□□□□□ -1.28
VPS11-201ENST00000524454 FAM83EQ2M2I3 478 aa7.04□□□□□ -1.28
VPS11-201ENST00000524454 PLEKHG6Q3KR16 790 aa7.04□□□□□ -1.28
VPS11-201ENST00000524454 PITRM1Q5JRX3 1037 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms