RNA–Protein interactions for RNA: ENST00000523549.1

NSMCE2-211, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

TSL 3

Gene NSMCE2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-211ENST00000523549 LIASO43766 372 aa3.99□□□□□ -1.77
NSMCE2-211ENST00000523549 IGLV2-11P01706 119 aa3.99□□□□□ -1.77
NSMCE2-211ENST00000523549 SNRNP70P08621 437 aaKnown RBP3.99□□□□□ -1.77
NSMCE2-211ENST00000523549 AKT1P31749 480 aa3.99□□□□□ -1.77
NSMCE2-211ENST00000523549 BTG3Q14201 252 aaPredicted RBP3.99□□□□□ -1.77
NSMCE2-211ENST00000523549 HLTFQ14527 1009 aaKnown RBP eCLIP3.99□□□□□ -1.77
NSMCE2-211ENST00000523549 PWP2Q15269 919 aaKnown RBP3.99□□□□□ -1.77
NSMCE2-211ENST00000523549 PTGISQ16647 500 aa3.99□□□□□ -1.77
NSMCE2-211ENST00000523549 ZNF569Q5MCW4 686 aa3.99□□□□□ -1.77
NSMCE2-211ENST00000523549 VWA5B1Q5TIE3 1220 aa3.99□□□□□ -1.77
NSMCE2-211ENST00000523549 PLPP4Q5VZY2 271 aa3.99□□□□□ -1.77
NSMCE2-211ENST00000523549 CCNI2Q6ZMN8 369 aaPredicted RBP3.99□□□□□ -1.77
NSMCE2-211ENST00000523549 ARMCX2Q7L311 632 aa3.99□□□□□ -1.77
NSMCE2-211ENST00000523549 TMEM217Q8N7C4 229 aa3.99□□□□□ -1.77
NSMCE2-211ENST00000523549 FAM110DQ8TAY7 271 aaPredicted RBP3.99□□□□□ -1.77
NSMCE2-211ENST00000523549 ACER1Q8TDN7 264 aa3.99□□□□□ -1.77
NSMCE2-211ENST00000523549 FAM216AQ8WUB2 273 aa3.99□□□□□ -1.77
NSMCE2-211ENST00000523549 P2RX5Q93086 422 aa3.99□□□□□ -1.77
NSMCE2-211ENST00000523549 KLHL5Q96PQ7 755 aa3.99□□□□□ -1.77
NSMCE2-211ENST00000523549 MYADMQ96S97 322 aa3.99□□□□□ -1.77
NSMCE2-211ENST00000523549 CDCA3Q99618 268 aaPredicted RBP3.99□□□□□ -1.77
NSMCE2-211ENST00000523549 PRPF18Q99633 342 aaKnown RBP3.99□□□□□ -1.77
NSMCE2-211ENST00000523549 NPAS1Q99742 590 aa3.99□□□□□ -1.77
NSMCE2-211ENST00000523549 SORBS1Q9BX66 1292 aaKnown RBP3.99□□□□□ -1.77
NSMCE2-211ENST00000523549 TMEM120AQ9BXJ8 343 aa3.99□□□□□ -1.77
NSMCE2-211ENST00000523549 ABHD16BQ9H3Z7 469 aa3.99□□□□□ -1.77
NSMCE2-211ENST00000523549 KLHL31Q9H511 634 aa3.99□□□□□ -1.77
NSMCE2-211ENST00000523549 RETREG1Q9H6L5 497 aa3.99□□□□□ -1.77
NSMCE2-211ENST00000523549 DNAJC18Q9H819 358 aa3.99□□□□□ -1.77
NSMCE2-211ENST00000523549 TSPYL4Q9UJ04 414 aa3.99□□□□□ -1.77
NSMCE2-211ENST00000523549 F5P12259 2224 aa3.99□□□□□ -1.77
NSMCE2-211ENST00000523549 MYH1P12882 1939 aa3.99□□□□□ -1.77
NSMCE2-211ENST00000523549 FLNAP21333 2647 aaKnown RBP3.98□□□□□ -1.77
NSMCE2-211ENST00000523549 GON4LQ3T8J9 2241 aa3.98□□□□□ -1.77
NSMCE2-211ENST00000523549 SDK2Q58EX2 2172 aa3.98□□□□□ -1.77
NSMCE2-211ENST00000523549 PLSCR5A0PG75 271 aa3.98□□□□□ -1.77
NSMCE2-211ENST00000523549 LNP1A1A4G5 178 aa3.98□□□□□ -1.77
NSMCE2-211ENST00000523549 ANKRD18BA2A2Z9 1011 aa3.98□□□□□ -1.77
NSMCE2-211ENST00000523549 MBD3L5A6NJ08 208 aaPredicted RBP3.98□□□□□ -1.77
NSMCE2-211ENST00000523549 STMND1H3BQB6 276 aa3.98□□□□□ -1.77
NSMCE2-211ENST00000523549 N4BP1O75113 896 aaKnown RBP3.98□□□□□ -1.77
NSMCE2-211ENST00000523549 PARNO95453 639 aaKnown RBP3.98□□□□□ -1.77
NSMCE2-211ENST00000523549 LARGE1O95461 756 aa3.98□□□□□ -1.77
NSMCE2-211ENST00000523549 KLRC2P26717 231 aa3.98□□□□□ -1.77
NSMCE2-211ENST00000523549 HOXC13P31276 330 aa3.98□□□□□ -1.77
NSMCE2-211ENST00000523549 SF3A3Q12874 501 aaKnown RBP eCLIP3.98□□□□□ -1.77
NSMCE2-211ENST00000523549 PKP1Q13835 747 aa3.98□□□□□ -1.77
NSMCE2-211ENST00000523549 COG2Q14746 738 aa3.98□□□□□ -1.77
NSMCE2-211ENST00000523549 PTPN14Q15678 1187 aa3.98□□□□□ -1.77
NSMCE2-211ENST00000523549 PLK5Q496M5 336 aa3.98□□□□□ -1.77
NSMCE2-211ENST00000523549 NFRKBQ6P4R8 1299 aa3.98□□□□□ -1.77
NSMCE2-211ENST00000523549 TMEM71Q6P5X7 295 aa3.98□□□□□ -1.77
NSMCE2-211ENST00000523549 ANKS1BQ7Z6G8 1248 aa3.98□□□□□ -1.77
NSMCE2-211ENST00000523549 TMEM200AQ86VY9 491 aa3.98□□□□□ -1.77
NSMCE2-211ENST00000523549 MARCH9Q86YJ5 346 aa3.98□□□□□ -1.77
NSMCE2-211ENST00000523549 DPP10Q8N608 796 aa3.98□□□□□ -1.77
NSMCE2-211ENST00000523549 NEXN-AS1Q8NBZ9 246 aa3.98□□□□□ -1.77
NSMCE2-211ENST00000523549 CMASQ8NFW8 434 aaPredicted RBP3.98□□□□□ -1.77
NSMCE2-211ENST00000523549 CCDC138Q96M89 665 aa3.98□□□□□ -1.77
NSMCE2-211ENST00000523549 POLR3GLQ9BT43 218 aa3.98□□□□□ -1.77
NSMCE2-211ENST00000523549 DDX23Q9BUQ8 820 aaKnown RBP3.98□□□□□ -1.77
NSMCE2-211ENST00000523549 ACTR5Q9H9F9 607 aaPredicted RBP3.98□□□□□ -1.77
NSMCE2-211ENST00000523549 SDF2L1Q9HCN8 221 aa3.98□□□□□ -1.77
NSMCE2-211ENST00000523549 LTB4R2Q9NPC1 389 aa3.98□□□□□ -1.77
NSMCE2-211ENST00000523549 ARL15Q9NXU5 204 aa3.98□□□□□ -1.77
NSMCE2-211ENST00000523549 CNTN6Q9UQ52 1028 aa3.98□□□□□ -1.77
NSMCE2-211ENST00000523549 PDCD11Q14690 1871 aaKnown RBP3.98□□□□□ -1.77
NSMCE2-211ENST00000523549 THADAQ6YHU6 1953 aa3.98□□□□□ -1.77
NSMCE2-211ENST00000523549 FSD2A1L4K1 749 aa3.97□□□□□ -1.77
NSMCE2-211ENST00000523549 FAM90A18PA6NE21 464 aa3.97□□□□□ -1.77
NSMCE2-211ENST00000523549 FAM90A16PA6NEW6 464 aa3.97□□□□□ -1.77
NSMCE2-211ENST00000523549 FAM90A9PA6NNJ1 464 aa3.97□□□□□ -1.77
NSMCE2-211ENST00000523549 HIDE1A8MVS5 230 aa3.97□□□□□ -1.77
NSMCE2-211ENST00000523549 FAM90A5PA8MXJ8 464 aa3.97□□□□□ -1.77
NSMCE2-211ENST00000523549 H0Y626 953 aa3.97□□□□□ -1.77
NSMCE2-211ENST00000523549 LDB2O43679 373 aa3.97□□□□□ -1.77
NSMCE2-211ENST00000523549 ASNA1O43681 348 aa3.97□□□□□ -1.77
NSMCE2-211ENST00000523549 TRIM16O95361 564 aa3.97□□□□□ -1.77
NSMCE2-211ENST00000523549 SLC25A27O95847 323 aa3.97□□□□□ -1.77
NSMCE2-211ENST00000523549 GH2P01242 217 aa3.97□□□□□ -1.77
NSMCE2-211ENST00000523549 F7P08709 466 aaPredicted RBP3.97□□□□□ -1.77
NSMCE2-211ENST00000523549 FAM90A15PP0C7V4 464 aa3.97□□□□□ -1.77
NSMCE2-211ENST00000523549 FAM90A14PP0C7W9 464 aa3.97□□□□□ -1.77
NSMCE2-211ENST00000523549 EIF2S3P41091 472 aaKnown RBP3.97□□□□□ -1.77
NSMCE2-211ENST00000523549 TUBA1BP68363 451 aa3.97□□□□□ -1.77
NSMCE2-211ENST00000523549 BNC1Q01954 994 aa3.97□□□□□ -1.77
NSMCE2-211ENST00000523549 RNASELQ05823 741 aaKnown RBP3.97□□□□□ -1.77
NSMCE2-211ENST00000523549 RBM39Q14498 530 aaKnown RBP3.97□□□□□ -1.77
NSMCE2-211ENST00000523549 PLCB4Q15147 1175 aa3.97□□□□□ -1.77
NSMCE2-211ENST00000523549 SLC30A9Q6PML9 568 aa3.97□□□□□ -1.77
NSMCE2-211ENST00000523549 GATAD2AQ86YP4 633 aa3.97□□□□□ -1.77
NSMCE2-211ENST00000523549 ENDOVQ8N8Q3 282 aaKnown RBP3.97□□□□□ -1.77
NSMCE2-211ENST00000523549 LRRC57Q8N9N7 239 aa3.97□□□□□ -1.77
NSMCE2-211ENST00000523549 PARD3BQ8TEW8 1205 aa3.97□□□□□ -1.77
NSMCE2-211ENST00000523549 RSC1A1Q92681 617 aa3.97□□□□□ -1.77
NSMCE2-211ENST00000523549 CASP10Q92851 521 aa3.97□□□□□ -1.77
NSMCE2-211ENST00000523549 MUL1Q969V5 352 aa3.97□□□□□ -1.77
NSMCE2-211ENST00000523549 CLDN23Q96B33 292 aa3.97□□□□□ -1.77
NSMCE2-211ENST00000523549 APOLD1Q96LR9 279 aa3.97□□□□□ -1.77
NSMCE2-211ENST00000523549 NODALQ96S42 347 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms