RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 DSCR3O14972 297 aa4.01□□□□□ -1.77
SKP1-209ENST00000522552 SPRY2O43597 315 aa4.01□□□□□ -1.77
SKP1-209ENST00000522552 GPC4O75487 556 aa4.01□□□□□ -1.77
SKP1-209ENST00000522552 SLITRK3O94933 977 aa4.01□□□□□ -1.77
SKP1-209ENST00000522552 VNN2O95498 520 aa4.01□□□□□ -1.77
SKP1-209ENST00000522552 CBX6O95503 412 aa4.01□□□□□ -1.77
SKP1-209ENST00000522552 SERPINC1P01008 464 aa4.01□□□□□ -1.77
SKP1-209ENST00000522552 SBK2P0C263 348 aa4.01□□□□□ -1.77
SKP1-209ENST00000522552 LINGO3P0C6S8 592 aa4.01□□□□□ -1.77
SKP1-209ENST00000522552 ZNF182P17025 639 aaPredicted RBP4.01□□□□□ -1.77
SKP1-209ENST00000522552 GJA1P17302 382 aa4.01□□□□□ -1.77
SKP1-209ENST00000522552 CYP11B2P19099 503 aa4.01□□□□□ -1.77
SKP1-209ENST00000522552 SPINK2P20155 84 aa4.01□□□□□ -1.77
SKP1-209ENST00000522552 ITGAXP20702 1163 aa4.01□□□□□ -1.77
SKP1-209ENST00000522552 CYP2A7P20853 494 aa4.01□□□□□ -1.77
SKP1-209ENST00000522552 GALP22466 123 aa4.01□□□□□ -1.77
SKP1-209ENST00000522552 FBLN1P23142 703 aa4.01□□□□□ -1.77
SKP1-209ENST00000522552 CENPAP49450 140 aa4.01□□□□□ -1.77
SKP1-209ENST00000522552 VPS41P49754 854 aa4.01□□□□□ -1.77
SKP1-209ENST00000522552 CHN2P52757 468 aa4.01□□□□□ -1.77
SKP1-209ENST00000522552 GPC5P78333 572 aa4.01□□□□□ -1.77
SKP1-209ENST00000522552 HGFACQ04756 655 aa4.01□□□□□ -1.77
SKP1-209ENST00000522552 SPP2Q13103 211 aa4.01□□□□□ -1.77
SKP1-209ENST00000522552 RPE65Q16518 533 aa4.01□□□□□ -1.77
SKP1-209ENST00000522552 MSMPQ1L6U9 139 aa4.01□□□□□ -1.77
SKP1-209ENST00000522552 CCDC57Q2TAC2 916 aa4.01□□□□□ -1.77
SKP1-209ENST00000522552 CDONQ4KMG0 1287 aa4.01□□□□□ -1.77
SKP1-209ENST00000522552 KLHL26Q53HC5 615 aa4.01□□□□□ -1.77
SKP1-209ENST00000522552 ARHGAP17Q68EM7 881 aa4.01□□□□□ -1.77
SKP1-209ENST00000522552 CASC4Q6P4E1 433 aa4.01□□□□□ -1.77
SKP1-209ENST00000522552 TRMT10BQ6PF06 316 aaKnown RBP4.01□□□□□ -1.77
SKP1-209ENST00000522552 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.01□□□□□ -1.77
SKP1-209ENST00000522552 ZBTB49Q6ZSB9 765 aa4.01□□□□□ -1.77
SKP1-209ENST00000522552 TAS2R42Q7RTR8 314 aa4.01□□□□□ -1.77
SKP1-209ENST00000522552 EXOC3L1Q86VI1 746 aa4.01□□□□□ -1.77
SKP1-209ENST00000522552 DTX1Q86Y01 620 aa4.01□□□□□ -1.77
SKP1-209ENST00000522552 ARID3BQ8IVW6 561 aaPredicted RBP4.01□□□□□ -1.77
SKP1-209ENST00000522552 SIAH3Q8IW03 269 aa4.01□□□□□ -1.77
SKP1-209ENST00000522552 HACE1Q8IYU2 909 aa4.01□□□□□ -1.77
SKP1-209ENST00000522552 FAM109AQ8N4B1 249 aa4.01□□□□□ -1.77
SKP1-209ENST00000522552 FBXO39Q8N4B4 442 aa4.01□□□□□ -1.77
SKP1-209ENST00000522552 EIF1ADQ8N9N8 165 aaKnown RBP4.01□□□□□ -1.77
SKP1-209ENST00000522552 GDPD5Q8WTR4 605 aa4.01□□□□□ -1.77
SKP1-209ENST00000522552 IP6K1Q92551 441 aa4.01□□□□□ -1.77
SKP1-209ENST00000522552 C14orf79Q96F83 325 aa4.01□□□□□ -1.77
SKP1-209ENST00000522552 FYTTD1Q96QD9 318 aaKnown RBP4.01□□□□□ -1.77
SKP1-209ENST00000522552 PANX3Q96QZ0 392 aa4.01□□□□□ -1.77
SKP1-209ENST00000522552 BBS4Q96RK4 519 aa4.01□□□□□ -1.77
SKP1-209ENST00000522552 PNKPQ96T60 521 aa4.01□□□□□ -1.77
SKP1-209ENST00000522552 TMEM117Q9H0C3 514 aa4.01□□□□□ -1.77
SKP1-209ENST00000522552 SUDS3Q9H7L9 328 aaPredicted RBP4.01□□□□□ -1.77
SKP1-209ENST00000522552 SRD5A3Q9H8P0 318 aa4.01□□□□□ -1.77
SKP1-209ENST00000522552 RPF1Q9H9Y2 349 aaKnown RBP4.01□□□□□ -1.77
SKP1-209ENST00000522552 EPB41L5Q9HCM4 733 aa4.01□□□□□ -1.77
SKP1-209ENST00000522552 TMEM184CQ9NVA4 438 aa4.01□□□□□ -1.77
SKP1-209ENST00000522552 TMEM248Q9NWD8 314 aa4.01□□□□□ -1.77
SKP1-209ENST00000522552 KCNN3Q9UGI6 736 aa4.01□□□□□ -1.77
SKP1-209ENST00000522552 POLLQ9UGP5 575 aa4.01□□□□□ -1.77
SKP1-209ENST00000522552 ATP6V1HQ9UI12 483 aa4.01□□□□□ -1.77
SKP1-209ENST00000522552 SLC24A2Q9UI40 661 aa4.01□□□□□ -1.77
SKP1-209ENST00000522552 MBD1Q9UIS9 605 aaPredicted RBP4.01□□□□□ -1.77
SKP1-209ENST00000522552 PSME2Q9UL46 239 aa4.01□□□□□ -1.77
SKP1-209ENST00000522552 DTX4Q9Y2E6 619 aa4.01□□□□□ -1.77
SKP1-209ENST00000522552 PKP3Q9Y446 797 aa4.01□□□□□ -1.77
SKP1-209ENST00000522552 N6AMT1Q9Y5N5 214 aa4.01□□□□□ -1.77
SKP1-209ENST00000522552 MROH5Q6ZUA9 1318 aa4.01□□□□□ -1.77
SKP1-209ENST00000522552 A0A087WZY1 265 aa4□□□□□ -1.77
SKP1-209ENST00000522552 C13orf42A0A1B0GVH6 325 aa4□□□□□ -1.77
SKP1-209ENST00000522552 A0A1W2PRX2 142 aa4□□□□□ -1.77
SKP1-209ENST00000522552 CBY3A6NI87 242 aa4□□□□□ -1.77
SKP1-209ENST00000522552 E7ENX8 843 aa4□□□□□ -1.77
SKP1-209ENST00000522552 E9PBE3 544 aa4□□□□□ -1.77
SKP1-209ENST00000522552 TRIM77I1YAP6 450 aa4□□□□□ -1.77
SKP1-209ENST00000522552 TLR4O00206 839 aa4□□□□□ -1.77
SKP1-209ENST00000522552 PLK4O00444 970 aa4□□□□□ -1.77
SKP1-209ENST00000522552 PPP6CO00743 305 aa4□□□□□ -1.77
SKP1-209ENST00000522552 CRCPO75575 148 aa4□□□□□ -1.77
SKP1-209ENST00000522552 RSL1D1O76021 490 aaKnown RBP4□□□□□ -1.77
SKP1-209ENST00000522552 MOCS3O95396 460 aa4□□□□□ -1.77
SKP1-209ENST00000522552 ALDOCP09972 364 aaKnown RBP4□□□□□ -1.77
SKP1-209ENST00000522552 SKILP12757 684 aa4□□□□□ -1.77
SKP1-209ENST00000522552 ZNF37AP17032 561 aaPredicted RBP4□□□□□ -1.77
SKP1-209ENST00000522552 HOXB9P17482 250 aaPredicted RBP4□□□□□ -1.77
SKP1-209ENST00000522552 NR1D1P20393 614 aa4□□□□□ -1.77
SKP1-209ENST00000522552 CDH3P22223 829 aa4□□□□□ -1.77
SKP1-209ENST00000522552 ADRA1DP25100 572 aa4□□□□□ -1.77
SKP1-209ENST00000522552 AZGP1P25311 298 aaKnown RBP4□□□□□ -1.77
SKP1-209ENST00000522552 CCND3P30281 292 aaPredicted RBP4□□□□□ -1.77
SKP1-209ENST00000522552 VIPR1P32241 457 aa4□□□□□ -1.77
SKP1-209ENST00000522552 SLC37A1P57057 533 aa4□□□□□ -1.77
SKP1-209ENST00000522552 CLDN2P57739 230 aa4□□□□□ -1.77
SKP1-209ENST00000522552 EEFSECP57772 596 aaKnown RBP4□□□□□ -1.77
SKP1-209ENST00000522552 TAS2R40P59535 323 aa4□□□□□ -1.77
SKP1-209ENST00000522552 RAE1P78406 368 aaKnown RBP4□□□□□ -1.77
SKP1-209ENST00000522552 GALK2Q01415 458 aa4□□□□□ -1.77
SKP1-209ENST00000522552 TAP2Q03519 686 aa4□□□□□ -1.77
SKP1-209ENST00000522552 IDI1Q13907 227 aa4□□□□□ -1.77
SKP1-209ENST00000522552 CPSF6Q16630 551 aaKnown RBP eCLIP4□□□□□ -1.77
SKP1-209ENST00000522552 CDO1Q16878 200 aa4□□□□□ -1.77
SKP1-209ENST00000522552 FILIP1LQ4L180 1135 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms