RNA–Protein interactions for RNA: ENST00000520399.1

ERGIC1-208, Transcript of endoplasmic reticulum-golgi intermediate compartment 1, humanhuman

TSL 1 (best)

Gene ERGIC1, Length 5,687 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC1-208ENST00000520399 SLC39A8Q9C0K1 460 aa12.06□□□□□ -0.48
ERGIC1-208ENST00000520399 SEMA6AQ9H2E6 1030 aa12.06□□□□□ -0.48
ERGIC1-208ENST00000520399 IGFLR1Q9H665 355 aa12.06□□□□□ -0.48
ERGIC1-208ENST00000520399 ANGPT4Q9Y264 503 aa12.06□□□□□ -0.48
ERGIC1-208ENST00000520399 TTC34A8MYJ7 566 aa12.06□□□□□ -0.48
ERGIC1-208ENST00000520399 SLC28A1O00337 649 aa12.06□□□□□ -0.48
ERGIC1-208ENST00000520399 SRSF11Q05519 484 aaKnown RBP12.06□□□□□ -0.48
ERGIC1-208ENST00000520399 GALNT7Q86SF2 657 aa12.06□□□□□ -0.48
ERGIC1-208ENST00000520399 TDRPQ86YL5 185 aa12.06□□□□□ -0.48
ERGIC1-208ENST00000520399 RASGEF1CQ8N431 466 aa12.06□□□□□ -0.48
ERGIC1-208ENST00000520399 GRIN3AQ8TCU5 1115 aa12.06□□□□□ -0.48
ERGIC1-208ENST00000520399 TBC1D24Q9ULP9 559 aa12.06□□□□□ -0.48
ERGIC1-208ENST00000520399 MTF2Q9Y483 593 aaPredicted RBP12.06□□□□□ -0.48
ERGIC1-208ENST00000520399 LRRC42Q9Y546 428 aa12.06□□□□□ -0.48
ERGIC1-208ENST00000520399 IRGMA1A4Y4 181 aa12.05□□□□□ -0.48
ERGIC1-208ENST00000520399 A8MUI8 341 aa12.05□□□□□ -0.48
ERGIC1-208ENST00000520399 COX4I1P13073 169 aa12.05□□□□□ -0.48
ERGIC1-208ENST00000520399 CXCR2P25025 360 aa12.05□□□□□ -0.48
ERGIC1-208ENST00000520399 GABRB2P47870 512 aa12.05□□□□□ -0.48
ERGIC1-208ENST00000520399 POLD2P49005 469 aa12.05□□□□□ -0.48
ERGIC1-208ENST00000520399 ATXN1P54253 815 aaKnown RBP12.05□□□□□ -0.48
ERGIC1-208ENST00000520399 ECT2LQ008S8 904 aa12.05□□□□□ -0.48
ERGIC1-208ENST00000520399 ABRQ12979 859 aa12.05□□□□□ -0.48
ERGIC1-208ENST00000520399 DPYSQ14117 519 aa12.05□□□□□ -0.48
ERGIC1-208ENST00000520399 PDK4Q16654 411 aa12.05□□□□□ -0.48
ERGIC1-208ENST00000520399 KLHDC10Q6PID8 442 aa12.05□□□□□ -0.48
ERGIC1-208ENST00000520399 TTC7BQ86TV6 843 aa12.05□□□□□ -0.48
ERGIC1-208ENST00000520399 TRAPPC5Q8IUR0 188 aa12.05□□□□□ -0.48
ERGIC1-208ENST00000520399 RNF148Q8N7C7 305 aa12.05□□□□□ -0.48
ERGIC1-208ENST00000520399 C12orf29Q8N999 325 aa12.05□□□□□ -0.48
ERGIC1-208ENST00000520399 GPER1Q99527 375 aa12.05□□□□□ -0.48
ERGIC1-208ENST00000520399 RNF208Q9H0X6 261 aa12.05□□□□□ -0.48
ERGIC1-208ENST00000520399 BPIFA1Q9NP55 256 aa12.05□□□□□ -0.48
ERGIC1-208ENST00000520399 ASAH2Q9NR71 780 aa12.05□□□□□ -0.48
ERGIC1-208ENST00000520399 MAT2BQ9NZL9 334 aa12.05□□□□□ -0.48
ERGIC1-208ENST00000520399 KLQ9UEF7 1012 aa12.05□□□□□ -0.48
ERGIC1-208ENST00000520399 CBY1Q9Y3M2 126 aa12.05□□□□□ -0.48
ERGIC1-208ENST00000520399 LOC100506127A0A0U1RQW1 187 aa12.05□□□□□ -0.48
ERGIC1-208ENST00000520399 PTGES3LE9PB15 166 aa12.05□□□□□ -0.48
ERGIC1-208ENST00000520399 OR10H2O60403 315 aa12.05□□□□□ -0.48
ERGIC1-208ENST00000520399 AVILO75366 819 aa12.05□□□□□ -0.48
ERGIC1-208ENST00000520399 SLURP2P0DP57 97 aa12.05□□□□□ -0.48
ERGIC1-208ENST00000520399 HKDC1Q2TB90 917 aa12.05□□□□□ -0.48
ERGIC1-208ENST00000520399 EEF1DP3Q658K8 133 aa12.05□□□□□ -0.48
ERGIC1-208ENST00000520399 PLET1Q6UQ28 207 aa12.05□□□□□ -0.48
ERGIC1-208ENST00000520399 MCFD2Q8NI22 146 aa12.05□□□□□ -0.48
ERGIC1-208ENST00000520399 AKAP1Q92667 903 aaKnown RBP eCLIP12.05□□□□□ -0.488e-6■■□□□ 11.6
ERGIC1-208ENST00000520399 PMM1Q92871 262 aa12.05□□□□□ -0.48
ERGIC1-208ENST00000520399 CRISPLD1Q9H336 500 aa12.05□□□□□ -0.48
ERGIC1-208ENST00000520399 ZMAT5Q9UDW3 170 aaKnown RBP12.05□□□□□ -0.48
ERGIC1-208ENST00000520399 PARP4Q9UKK3 1724 aaKnown RBP12.05□□□□□ -0.48
ERGIC1-208ENST00000520399 LOC110117498-PIK3R3F6TDL0 507 aa12.05□□□□□ -0.48
ERGIC1-208ENST00000520399 SGTAO43765 313 aa12.05□□□□□ -0.48
ERGIC1-208ENST00000520399 ITGA2P17301 1181 aa12.05□□□□□ -0.48
ERGIC1-208ENST00000520399 QPCTQ16769 361 aa12.05□□□□□ -0.48
ERGIC1-208ENST00000520399 TMEM214Q6NUQ4 689 aaKnown RBP12.05□□□□□ -0.48
ERGIC1-208ENST00000520399 BHLHB9Q6PI77 547 aa12.05□□□□□ -0.48
ERGIC1-208ENST00000520399 ZDHHC13Q8IUH4 622 aa12.05□□□□□ -0.48
ERGIC1-208ENST00000520399 DEPDC4Q8N2C3 294 aa12.05□□□□□ -0.48
ERGIC1-208ENST00000520399 CENPSQ8N2Z9 138 aa12.05□□□□□ -0.48
ERGIC1-208ENST00000520399 TMEM199Q8N511 208 aa12.05□□□□□ -0.48
ERGIC1-208ENST00000520399 PIK3R3Q92569 461 aa12.05□□□□□ -0.48
ERGIC1-208ENST00000520399 FMN2Q9NZ56 1722 aa12.05□□□□□ -0.48
ERGIC1-208ENST00000520399 METTL21EPA6NDL7 271 aa12.05□□□□□ -0.48
ERGIC1-208ENST00000520399 URADA6NGE7 173 aa12.05□□□□□ -0.48
ERGIC1-208ENST00000520399 PLOD3O60568 738 aa12.05□□□□□ -0.48
ERGIC1-208ENST00000520399 GSTT2P0CG29 244 aa12.05□□□□□ -0.48
ERGIC1-208ENST00000520399 GSTT2BP0CG30 244 aa12.05□□□□□ -0.48
ERGIC1-208ENST00000520399 HSD3B1P14060 373 aa12.05□□□□□ -0.48
ERGIC1-208ENST00000520399 PKNOX1P55347 436 aa12.05□□□□□ -0.48
ERGIC1-208ENST00000520399 CAV3P56539 151 aa12.05□□□□□ -0.48
ERGIC1-208ENST00000520399 ACSM2AQ08AH3 577 aa12.05□□□□□ -0.48
ERGIC1-208ENST00000520399 HSDL1Q3SXM5 330 aa12.05□□□□□ -0.48
ERGIC1-208ENST00000520399 ACSM2BQ68CK6 577 aa12.05□□□□□ -0.48
ERGIC1-208ENST00000520399 DNAJC14Q6Y2X3 702 aaPredicted RBP12.05□□□□□ -0.48
ERGIC1-208ENST00000520399 C12orf50Q8NA57 414 aaPredicted RBP12.05□□□□□ -0.48
ERGIC1-208ENST00000520399 FAM98AQ8NCA5 519 aaKnown RBP12.05□□□□□ -0.48
ERGIC1-208ENST00000520399 KLRG1Q96E93 195 aa12.05□□□□□ -0.48
ERGIC1-208ENST00000520399 ARL5CA6NH57 179 aa12.04□□□□□ -0.48
ERGIC1-208ENST00000520399 B8ZZF3 427 aa12.04□□□□□ -0.48
ERGIC1-208ENST00000520399 NOL4O94818 638 aa12.04□□□□□ -0.48
ERGIC1-208ENST00000520399 ENDOUP21128 410 aaKnown RBP12.04□□□□□ -0.48
ERGIC1-208ENST00000520399 S100A2P29034 98 aa12.04□□□□□ -0.48
ERGIC1-208ENST00000520399 MNDAP41218 407 aa12.04□□□□□ -0.48
ERGIC1-208ENST00000520399 LSAMPQ13449 338 aa12.04□□□□□ -0.48
ERGIC1-208ENST00000520399 GPAT3Q53EU6 434 aa12.04□□□□□ -0.48
ERGIC1-208ENST00000520399 BRMS1LQ5PSV4 323 aa12.04□□□□□ -0.48
ERGIC1-208ENST00000520399 XYLT1Q86Y38 959 aa12.04□□□□□ -0.48
ERGIC1-208ENST00000520399 GALNT12Q8IXK2 581 aa12.04□□□□□ -0.48
ERGIC1-208ENST00000520399 TRPV1Q8NER1 839 aa12.04□□□□□ -0.48
ERGIC1-208ENST00000520399 OR2L5Q8NG80 312 aa12.04□□□□□ -0.48
ERGIC1-208ENST00000520399 SLC22A8Q8TCC7 542 aa12.04□□□□□ -0.48
ERGIC1-208ENST00000520399 ATL1Q8WXF7 558 aa12.04□□□□□ -0.48
ERGIC1-208ENST00000520399 PCDHB18PQ96TA0 734 aa12.04□□□□□ -0.48
ERGIC1-208ENST00000520399 PRDM12Q9H4Q4 367 aa12.04□□□□□ -0.48
ERGIC1-208ENST00000520399 MRTO4Q9UKD2 239 aaKnown RBP12.04□□□□□ -0.48
ERGIC1-208ENST00000520399 SH3PXD2BA1X283 911 aa12.04□□□□□ -0.48
ERGIC1-208ENST00000520399 OR14I1A6ND48 311 aa12.04□□□□□ -0.48
ERGIC1-208ENST00000520399 CATP04040 527 aaKnown RBP12.04□□□□□ -0.48
ERGIC1-208ENST00000520399 CRATP43155 626 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms