RNA–Protein interactions for RNA: ENST00000520022.2

ARFGAP1-213, Transcript of ADP ribosylation factor GTPase activating protein 1, humanhuman

TSL 4

Gene ARFGAP1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGAP1-213ENST00000520022 PCDHA13Q9Y5I0 950 aa17.36■□□□□ 0.37
ARFGAP1-213ENST00000520022 SPO11Q9Y5K1 396 aa17.36■□□□□ 0.37
ARFGAP1-213ENST00000520022 SCN8AQ9UQD0 1980 aa17.35■□□□□ 0.37
ARFGAP1-213ENST00000520022 C9orf172C9J069 976 aa17.35■□□□□ 0.37
ARFGAP1-213ENST00000520022 TK2O00142 265 aa17.35■□□□□ 0.37
ARFGAP1-213ENST00000520022 AURKAO14965 403 aa17.35■□□□□ 0.37
ARFGAP1-213ENST00000520022 GRID2O43424 1007 aa17.35■□□□□ 0.37
ARFGAP1-213ENST00000520022 PSTPIP1O43586 416 aa17.35■□□□□ 0.37
ARFGAP1-213ENST00000520022 C1QL1O75973 258 aa17.35■□□□□ 0.37
ARFGAP1-213ENST00000520022 SLC25A14O95258 325 aaPredicted RBP17.35■□□□□ 0.37
ARFGAP1-213ENST00000520022 ZNF8P17098 575 aaPredicted RBP17.35■□□□□ 0.37
ARFGAP1-213ENST00000520022 CD68P34810 354 aaPredicted RBP17.35■□□□□ 0.37
ARFGAP1-213ENST00000520022 MARCKSL1P49006 195 aa17.35■□□□□ 0.37
ARFGAP1-213ENST00000520022 NR2C2P49116 596 aa17.35■□□□□ 0.37
ARFGAP1-213ENST00000520022 RHDQ02161 417 aa17.35■□□□□ 0.37
ARFGAP1-213ENST00000520022 WASHC5Q12768 1159 aa17.35■□□□□ 0.37
ARFGAP1-213ENST00000520022 NFATC2Q13469 925 aa17.35■□□□□ 0.37
ARFGAP1-213ENST00000520022 NOMO1Q15155 1222 aa17.35■□□□□ 0.37
ARFGAP1-213ENST00000520022 CCDC70Q6NSX1 233 aa17.35■□□□□ 0.37
ARFGAP1-213ENST00000520022 BZW1Q7L1Q6 419 aaKnown RBP17.35■□□□□ 0.37
ARFGAP1-213ENST00000520022 SFRP1Q8N474 314 aa17.35■□□□□ 0.37
ARFGAP1-213ENST00000520022 SLC38A3Q99624 504 aa17.35■□□□□ 0.37
ARFGAP1-213ENST00000520022 BPIFA1Q9NP55 256 aa17.35■□□□□ 0.37
ARFGAP1-213ENST00000520022 AHCTF1Q8WYP5 2266 aa17.35■□□□□ 0.37
ARFGAP1-213ENST00000520022 ERVH48-1M5A8F1 160 aa17.34■□□□□ 0.37
ARFGAP1-213ENST00000520022 NUAK1O60285 661 aa17.34■□□□□ 0.37
ARFGAP1-213ENST00000520022 ZRANB2O95218 330 aaKnown RBP eCLIP17.34■□□□□ 0.372e-6■□□□□ 9.6
ARFGAP1-213ENST00000520022 NDST3O95803 873 aa17.34■□□□□ 0.37
ARFGAP1-213ENST00000520022 BPIP17213 487 aa17.34■□□□□ 0.37
ARFGAP1-213ENST00000520022 NFKB1P19838 968 aa17.34■□□□□ 0.37
ARFGAP1-213ENST00000520022 CSF2RBP32927 897 aa17.34■□□□□ 0.37
ARFGAP1-213ENST00000520022 LIMK2P53671 638 aa17.34■□□□□ 0.37
ARFGAP1-213ENST00000520022 HADHBP55084 474 aaKnown RBP17.34■□□□□ 0.37
ARFGAP1-213ENST00000520022 C19orf57Q0VDD7 668 aa17.34■□□□□ 0.37
ARFGAP1-213ENST00000520022 ZNF569Q5MCW4 686 aa17.34■□□□□ 0.37
ARFGAP1-213ENST00000520022 IYDQ6PHW0 289 aa17.34■□□□□ 0.37
ARFGAP1-213ENST00000520022 CCDC50Q8IVM0 306 aa17.34■□□□□ 0.37
ARFGAP1-213ENST00000520022 RCOR2Q8IZ40 523 aa17.34■□□□□ 0.37
ARFGAP1-213ENST00000520022 SLC25A41Q8N5S1 370 aa17.34■□□□□ 0.37
ARFGAP1-213ENST00000520022 LSM14AQ8ND56 463 aaKnown RBP17.34■□□□□ 0.37
ARFGAP1-213ENST00000520022 OR4D9Q8NGE8 314 aa17.34■□□□□ 0.37
ARFGAP1-213ENST00000520022 SNRNP27Q8WVK2 155 aaKnown RBP17.34■□□□□ 0.37
ARFGAP1-213ENST00000520022 P3H4Q92791 437 aa17.34■□□□□ 0.37
ARFGAP1-213ENST00000520022 AHCYL2Q96HN2 611 aaKnown RBP17.34■□□□□ 0.37
ARFGAP1-213ENST00000520022 HEMGNQ9BXL5 484 aa17.34■□□□□ 0.37
ARFGAP1-213ENST00000520022 ZMYND15Q9H091 742 aa17.34■□□□□ 0.37
ARFGAP1-213ENST00000520022 CARD9Q9H257 536 aa17.34■□□□□ 0.37
ARFGAP1-213ENST00000520022 RMI1Q9H9A7 625 aa17.34■□□□□ 0.37
ARFGAP1-213ENST00000520022 ZFC3H1O60293 1989 aaKnown RBP17.33■□□□□ 0.37
ARFGAP1-213ENST00000520022 hCG_1818297A0A087WSY0 165 aa17.33■□□□□ 0.36
ARFGAP1-213ENST00000520022 MTX2O75431 263 aa17.33■□□□□ 0.36
ARFGAP1-213ENST00000520022 LCA5LO95447 670 aa17.33■□□□□ 0.36
ARFGAP1-213ENST00000520022 FGF3P11487 239 aaPredicted RBP17.33■□□□□ 0.36
ARFGAP1-213ENST00000520022 FASLGP48023 281 aa17.33■□□□□ 0.36
ARFGAP1-213ENST00000520022 HHEXQ03014 270 aa17.33■□□□□ 0.36
ARFGAP1-213ENST00000520022 SQSTM1Q13501 440 aa17.33■□□□□ 0.36
ARFGAP1-213ENST00000520022 SPA17Q15506 151 aa17.33■□□□□ 0.36
ARFGAP1-213ENST00000520022 CLPPQ16740 277 aaPredicted RBP17.33■□□□□ 0.36
ARFGAP1-213ENST00000520022 PLA2G4EQ3MJ16 856 aa17.33■□□□□ 0.36
ARFGAP1-213ENST00000520022 TFDP3Q5H9I0 405 aa17.33■□□□□ 0.36
ARFGAP1-213ENST00000520022 SNAP47Q5SQN1 464 aa17.33■□□□□ 0.36
ARFGAP1-213ENST00000520022 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.33■□□□□ 0.36
ARFGAP1-213ENST00000520022 CRTC3Q6UUV7 619 aa17.33■□□□□ 0.36
ARFGAP1-213ENST00000520022 PID1Q7Z2X4 250 aa17.33■□□□□ 0.36
ARFGAP1-213ENST00000520022 ADGRG6Q86SQ4 1221 aa17.33■□□□□ 0.36
ARFGAP1-213ENST00000520022 KATNAL2Q8IYT4 538 aa17.33■□□□□ 0.36
ARFGAP1-213ENST00000520022 TRAM1L1Q8N609 369 aa17.33■□□□□ 0.36
ARFGAP1-213ENST00000520022 JPH3Q8WXH2 748 aaPredicted RBP17.33■□□□□ 0.36
ARFGAP1-213ENST00000520022 KRT35Q92764 455 aa17.33■□□□□ 0.36
ARFGAP1-213ENST00000520022 GLYATL1Q969I3 302 aa17.33■□□□□ 0.36
ARFGAP1-213ENST00000520022 PMEPA1Q969W9 287 aa17.33■□□□□ 0.36
ARFGAP1-213ENST00000520022 ZSCAN5AQ9BUG6 496 aa17.33■□□□□ 0.36
ARFGAP1-213ENST00000520022 C10orf88Q9H8K7 445 aa17.33■□□□□ 0.36
ARFGAP1-213ENST00000520022 TRIM39Q9HCM9 518 aa17.33■□□□□ 0.36
ARFGAP1-213ENST00000520022 PRDM8Q9NQV8 689 aa17.33■□□□□ 0.36
ARFGAP1-213ENST00000520022 KLC4Q9NSK0 619 aa17.33■□□□□ 0.36
ARFGAP1-213ENST00000520022 KLHL8Q9P2G9 620 aaPredicted RBP17.33■□□□□ 0.36
ARFGAP1-213ENST00000520022 SLC23A2Q9UGH3 650 aa17.33■□□□□ 0.36
ARFGAP1-213ENST00000520022 FAM153AQ9UHL3 310 aa17.33■□□□□ 0.36
ARFGAP1-213ENST00000520022 ACSL6Q9UKU0 697 aa17.33■□□□□ 0.36
ARFGAP1-213ENST00000520022 A8MU76 341 aa17.32■□□□□ 0.36
ARFGAP1-213ENST00000520022 HGSO14964 777 aaPredicted RBP17.32■□□□□ 0.36
ARFGAP1-213ENST00000520022 LIPCP11150 499 aa17.32■□□□□ 0.36
ARFGAP1-213ENST00000520022 CHRNA4P43681 627 aa17.32■□□□□ 0.36
ARFGAP1-213ENST00000520022 MAPK9P45984 424 aa17.32■□□□□ 0.36
ARFGAP1-213ENST00000520022 WNT3AP56704 352 aa17.32■□□□□ 0.36
ARFGAP1-213ENST00000520022 LY6DQ14210 128 aa17.32■□□□□ 0.36
ARFGAP1-213ENST00000520022 SLC14A2Q15849 920 aa17.32■□□□□ 0.36
ARFGAP1-213ENST00000520022 TMEM71Q6P5X7 295 aa17.32■□□□□ 0.36
ARFGAP1-213ENST00000520022 KDELC1Q6UW63 502 aa17.32■□□□□ 0.36
ARFGAP1-213ENST00000520022 DAAM2Q86T65 1068 aa17.32■□□□□ 0.36
ARFGAP1-213ENST00000520022 VASH2Q86V25 355 aa17.32■□□□□ 0.36
ARFGAP1-213ENST00000520022 CCDC170Q8IYT3 715 aa17.32■□□□□ 0.36
ARFGAP1-213ENST00000520022 ZNF567Q8N184 647 aa17.32■□□□□ 0.36
ARFGAP1-213ENST00000520022 OR10G6Q8NH81 332 aa17.32■□□□□ 0.36
ARFGAP1-213ENST00000520022 NCSTNQ92542 709 aa17.32■□□□□ 0.36
ARFGAP1-213ENST00000520022 TTC9Q92623 222 aa17.32■□□□□ 0.36
ARFGAP1-213ENST00000520022 OSGEPL1Q9H4B0 414 aa17.32■□□□□ 0.36
ARFGAP1-213ENST00000520022 RAD18Q9NS91 495 aa17.32■□□□□ 0.36
ARFGAP1-213ENST00000520022 OCIAD1Q9NX40 245 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms