RNA–Protein interactions for RNA: ENST00000519623.1

CSMD1-205, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-205ENST00000519623 AGAP3Q96P47 875 aa12.31□□□□□ -0.44
CSMD1-205ENST00000519623 SLC38A3Q99624 504 aa12.31□□□□□ -0.44
CSMD1-205ENST00000519623 MAK16Q9BXY0 300 aaKnown RBP12.31□□□□□ -0.44
CSMD1-205ENST00000519623 BRD8Q9H0E9 1235 aa12.31□□□□□ -0.44
CSMD1-205ENST00000519623 SLC25A51Q9H1U9 297 aa12.31□□□□□ -0.44
CSMD1-205ENST00000519623 CARD9Q9H257 536 aa12.31□□□□□ -0.44
CSMD1-205ENST00000519623 MAGEE1Q9HCI5 957 aa12.31□□□□□ -0.44
CSMD1-205ENST00000519623 SARS2Q9NP81 518 aaKnown RBP12.31□□□□□ -0.44
CSMD1-205ENST00000519623 ZNHIT6Q9NWK9 470 aaKnown RBP12.31□□□□□ -0.44
CSMD1-205ENST00000519623 SHOC2Q9UQ13 582 aa12.31□□□□□ -0.44
CSMD1-205ENST00000519623 KCNK6Q9Y257 313 aa12.31□□□□□ -0.44
CSMD1-205ENST00000519623 PCDHGA4Q9Y5G9 962 aa12.31□□□□□ -0.44
CSMD1-205ENST00000519623 B3GALT1Q9Y5Z6 326 aa12.31□□□□□ -0.44
CSMD1-205ENST00000519623 ADGRG1Q9Y653 693 aa12.31□□□□□ -0.44
CSMD1-205ENST00000519623 B4E171 279 aa12.3□□□□□ -0.44
CSMD1-205ENST00000519623 STMND1H3BQB6 276 aa12.3□□□□□ -0.44
CSMD1-205ENST00000519623 J3QKU1 62 aa12.3□□□□□ -0.44
CSMD1-205ENST00000519623 PIRTP0C851 137 aa12.3□□□□□ -0.44
CSMD1-205ENST00000519623 ACP5P13686 325 aa12.3□□□□□ -0.44
CSMD1-205ENST00000519623 ZFXP17010 805 aaPredicted RBP12.3□□□□□ -0.44
CSMD1-205ENST00000519623 TSPAN7P41732 249 aa12.3□□□□□ -0.44
CSMD1-205ENST00000519623 CLCNKAP51800 687 aa12.3□□□□□ -0.44
CSMD1-205ENST00000519623 HHEXQ03014 270 aa12.3□□□□□ -0.44
CSMD1-205ENST00000519623 CDK18Q07002 472 aa12.3□□□□□ -0.44
CSMD1-205ENST00000519623 SLC14A2Q15849 920 aa12.3□□□□□ -0.44
CSMD1-205ENST00000519623 TAZQ16635 292 aa12.3□□□□□ -0.44
CSMD1-205ENST00000519623 TEX44Q53QW1 395 aa12.3□□□□□ -0.44
CSMD1-205ENST00000519623 WDR74Q6RFH5 385 aaPredicted RBP12.3□□□□□ -0.44
CSMD1-205ENST00000519623 XKR5Q6UX68 686 aa12.3□□□□□ -0.44
CSMD1-205ENST00000519623 MFSD7Q6UXD7 560 aa12.3□□□□□ -0.44
CSMD1-205ENST00000519623 ADGRG6Q86SQ4 1221 aa12.3□□□□□ -0.44
CSMD1-205ENST00000519623 RHOT2Q8IXI1 618 aa12.3□□□□□ -0.44
CSMD1-205ENST00000519623 OR10G6Q8NH81 332 aa12.3□□□□□ -0.44
CSMD1-205ENST00000519623 SPATA22Q8NHS9 363 aa12.3□□□□□ -0.44
CSMD1-205ENST00000519623 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.3□□□□□ -0.44
CSMD1-205ENST00000519623 HTR3CQ8WXA8 447 aa12.3□□□□□ -0.44
CSMD1-205ENST00000519623 JPH3Q8WXH2 748 aaPredicted RBP12.3□□□□□ -0.44
CSMD1-205ENST00000519623 EXTL1Q92935 676 aa12.3□□□□□ -0.44
CSMD1-205ENST00000519623 ART4Q93070 314 aa12.3□□□□□ -0.44
CSMD1-205ENST00000519623 AHCYL2Q96HN2 611 aaKnown RBP12.3□□□□□ -0.44
CSMD1-205ENST00000519623 CCDC42Q96M95 316 aa12.3□□□□□ -0.44
CSMD1-205ENST00000519623 HERPUD2Q9BSE4 406 aa12.3□□□□□ -0.44
CSMD1-205ENST00000519623 DDA1Q9BW61 102 aa12.3□□□□□ -0.44
CSMD1-205ENST00000519623 SPATA16Q9BXB7 569 aa12.3□□□□□ -0.44
CSMD1-205ENST00000519623 SPRY4Q9C004 299 aa12.3□□□□□ -0.44
CSMD1-205ENST00000519623 OR2AG1Q9H205 316 aa12.3□□□□□ -0.44
CSMD1-205ENST00000519623 TRIM39Q9HCM9 518 aa12.3□□□□□ -0.44
CSMD1-205ENST00000519623 ARFGAP3Q9NP61 516 aa12.3□□□□□ -0.44
CSMD1-205ENST00000519623 PRDM8Q9NQV8 689 aa12.3□□□□□ -0.44
CSMD1-205ENST00000519623 SLC39A1Q9NY26 324 aa12.3□□□□□ -0.44
CSMD1-205ENST00000519623 HYOU1Q9Y4L1 999 aa12.3□□□□□ -0.44
CSMD1-205ENST00000519623 SPTA1P02549 2419 aa12.29□□□□□ -0.44
CSMD1-205ENST00000519623 OR5K4A6NMS3 321 aa12.29□□□□□ -0.44
CSMD1-205ENST00000519623 EFCAB7A8K855 629 aa12.29□□□□□ -0.44
CSMD1-205ENST00000519623 CHUKO15111 745 aa12.29□□□□□ -0.44
CSMD1-205ENST00000519623 SNX2O60749 519 aa12.29□□□□□ -0.44
CSMD1-205ENST00000519623 MFAP3LO75121 409 aa12.29□□□□□ -0.44
CSMD1-205ENST00000519623 SLC25A14O95258 325 aaPredicted RBP12.29□□□□□ -0.44
CSMD1-205ENST00000519623 MT-CYBP00156 380 aaPredicted RBP12.29□□□□□ -0.44
CSMD1-205ENST00000519623 KRT1P04264 644 aa12.29□□□□□ -0.44
CSMD1-205ENST00000519623 F3P13726 295 aa12.29□□□□□ -0.44
CSMD1-205ENST00000519623 PTMSP20962 102 aa12.29□□□□□ -0.44
CSMD1-205ENST00000519623 UGT1A3P35503 534 aa12.29□□□□□ -0.44
CSMD1-205ENST00000519623 SLC1A1P43005 524 aa12.29□□□□□ -0.44
CSMD1-205ENST00000519623 NOP2P46087 812 aaKnown RBP12.29□□□□□ -0.44
CSMD1-205ENST00000519623 DCDC1P59894 354 aa12.29□□□□□ -0.44
CSMD1-205ENST00000519623 CYP4F2P78329 520 aa12.29□□□□□ -0.44
CSMD1-205ENST00000519623 NFATC2Q13469 925 aa12.29□□□□□ -0.44
CSMD1-205ENST00000519623 TBR1Q16650 682 aa12.29□□□□□ -0.44
CSMD1-205ENST00000519623 ALS2CLQ60I27 953 aa12.29□□□□□ -0.44
CSMD1-205ENST00000519623 SLC9B2Q86UD5 537 aa12.29□□□□□ -0.44
CSMD1-205ENST00000519623 RFX6Q8HWS3 928 aa12.29□□□□□ -0.44
CSMD1-205ENST00000519623 TRAM1L1Q8N609 369 aa12.29□□□□□ -0.44
CSMD1-205ENST00000519623 NCSTNQ92542 709 aa12.29□□□□□ -0.44
CSMD1-205ENST00000519623 SH3KBP1Q96B97 665 aa12.29□□□□□ -0.44
CSMD1-205ENST00000519623 TEKT5Q96M29 485 aa12.29□□□□□ -0.44
CSMD1-205ENST00000519623 ZSCAN5AQ9BUG6 496 aa12.29□□□□□ -0.44
CSMD1-205ENST00000519623 SLC12A9Q9BXP2 914 aa12.29□□□□□ -0.44
CSMD1-205ENST00000519623 ASPSCR1Q9BZE9 553 aa12.29□□□□□ -0.44
CSMD1-205ENST00000519623 GLOD4Q9HC38 313 aa12.29□□□□□ -0.44
CSMD1-205ENST00000519623 SCHIP1Q9P0W5 487 aaPredicted RBP12.29□□□□□ -0.44
CSMD1-205ENST00000519623 NFKBIL1Q9UBC1 381 aaPredicted RBP12.29□□□□□ -0.44
CSMD1-205ENST00000519623 SAE1Q9UBE0 346 aaPredicted RBP12.29□□□□□ -0.44
CSMD1-205ENST00000519623 CPNE7Q9UBL6 633 aa12.29□□□□□ -0.44
CSMD1-205ENST00000519623 SLC23A2Q9UGH3 650 aa12.29□□□□□ -0.44
CSMD1-205ENST00000519623 TMPRSS11EQ9UL52 423 aa12.29□□□□□ -0.44
CSMD1-205ENST00000519623 INTUQ9ULD6 942 aa12.29□□□□□ -0.44
CSMD1-205ENST00000519623 ZNF711Q9Y462 761 aa12.29□□□□□ -0.44
CSMD1-205ENST00000519623 ASH1LQ9NR48 2969 aaKnown RBP12.28□□□□□ -0.44
CSMD1-205ENST00000519623 KIR2DS5A0A0G2JLQ3 304 aa12.28□□□□□ -0.44
CSMD1-205ENST00000519623 A0A0G2JNG1 304 aa12.28□□□□□ -0.44
CSMD1-205ENST00000519623 PRR19A6NJB7 356 aa12.28□□□□□ -0.44
CSMD1-205ENST00000519623 A8MU76 341 aa12.28□□□□□ -0.44
CSMD1-205ENST00000519623 GPR89AB7ZAQ6 455 aa12.28□□□□□ -0.44
CSMD1-205ENST00000519623 KIR2DS3K7RE56 304 aa12.28□□□□□ -0.44
CSMD1-205ENST00000519623 AURKAO14965 403 aa12.28□□□□□ -0.44
CSMD1-205ENST00000519623 PPP1R12AO14974 1030 aaPredicted RBP12.28□□□□□ -0.44
CSMD1-205ENST00000519623 DUX1O43812 170 aa12.28□□□□□ -0.44
CSMD1-205ENST00000519623 NDST3O95803 873 aa12.28□□□□□ -0.44
CSMD1-205ENST00000519623 GPR89BP0CG08 455 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms