RNA–Protein interactions for RNA: ENST00000519540.5

FAM49B-214, Transcript of family with sequence similarity 49 member B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM49B, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-214ENST00000519540 BRD9Q9H8M2 597 aa18.33■□□□□ 0.52
FAM49B-214ENST00000519540 GTSE1Q9NYZ3 720 aa18.33■□□□□ 0.52
FAM49B-214ENST00000519540 IQCF5A8MTL0 148 aa18.32■□□□□ 0.52
FAM49B-214ENST00000519540 TTC34A8MYJ7 566 aa18.32■□□□□ 0.52
FAM49B-214ENST00000519540 B2RBV5 119 aa18.32■□□□□ 0.52
FAM49B-214ENST00000519540 TMEM233B4DJY2 109 aa18.32■□□□□ 0.52
FAM49B-214ENST00000519540 E9PBE3 544 aa18.32■□□□□ 0.52
FAM49B-214ENST00000519540 GSC2O15499 205 aa18.32■□□□□ 0.52
FAM49B-214ENST00000519540 KLHL41O60662 606 aa18.32■□□□□ 0.52
FAM49B-214ENST00000519540 SUPT7LO94864 414 aa18.32■□□□□ 0.52
FAM49B-214ENST00000519540 JUNP05412 331 aaKnown RBP18.32■□□□□ 0.52
FAM49B-214ENST00000519540 CHRM1P11229 460 aaPredicted RBP18.32■□□□□ 0.52
FAM49B-214ENST00000519540 UGT1A6P19224 532 aa18.32■□□□□ 0.52
FAM49B-214ENST00000519540 UGT1A1P22309 533 aa18.32■□□□□ 0.52
FAM49B-214ENST00000519540 UGT1A4P22310 534 aa18.32■□□□□ 0.52
FAM49B-214ENST00000519540 RPS3P23396 243 aaKnown RBP eCLIP18.32■□□□□ 0.52
FAM49B-214ENST00000519540 EPHA3P29320 983 aa18.32■□□□□ 0.52
FAM49B-214ENST00000519540 UGT1A3P35503 534 aa18.32■□□□□ 0.52
FAM49B-214ENST00000519540 UGT1A5P35504 534 aa18.32■□□□□ 0.52
FAM49B-214ENST00000519540 MAGEA10P43363 369 aaPredicted RBP18.32■□□□□ 0.52
FAM49B-214ENST00000519540 RECQLP46063 649 aaPredicted RBP18.32■□□□□ 0.52
FAM49B-214ENST00000519540 CPA2P48052 419 aa18.32■□□□□ 0.52
FAM49B-214ENST00000519540 DGKGP49619 791 aa18.32■□□□□ 0.52
FAM49B-214ENST00000519540 CLCN7P51798 805 aa18.32■□□□□ 0.52
FAM49B-214ENST00000519540 IL2P60568 153 aa18.32■□□□□ 0.52
FAM49B-214ENST00000519540 KDSRQ06136 332 aa18.32■□□□□ 0.52
FAM49B-214ENST00000519540 CHRNA6Q15825 494 aa18.32■□□□□ 0.52
FAM49B-214ENST00000519540 GPR33Q49SQ1 333 aa18.32■□□□□ 0.52
FAM49B-214ENST00000519540 TCEAL5Q5H9L2 206 aa18.32■□□□□ 0.52
FAM49B-214ENST00000519540 FAM78AQ5JUQ0 283 aa18.32■□□□□ 0.52
FAM49B-214ENST00000519540 UGT3A1Q6NUS8 523 aa18.32■□□□□ 0.52
FAM49B-214ENST00000519540 TEX9Q8N6V9 391 aa18.32■□□□□ 0.52
FAM49B-214ENST00000519540 PTGR2Q8N8N7 351 aaPredicted RBP18.32■□□□□ 0.52
FAM49B-214ENST00000519540 GPR26Q8NDV2 337 aa18.32■□□□□ 0.52
FAM49B-214ENST00000519540 EEF1AKMT1Q8WVE0 214 aa18.32■□□□□ 0.52
FAM49B-214ENST00000519540 CCDC97Q96F63 343 aaPredicted RBP18.32■□□□□ 0.52
FAM49B-214ENST00000519540 ASIC4Q96FT7 647 aa18.32■□□□□ 0.52
FAM49B-214ENST00000519540 PPP1R36Q96LQ0 422 aa18.32■□□□□ 0.52
FAM49B-214ENST00000519540 KLHL32Q96NJ5 620 aa18.32■□□□□ 0.52
FAM49B-214ENST00000519540 OSBPL1AQ9BXW6 950 aa18.32■□□□□ 0.52
FAM49B-214ENST00000519540 SFXN1Q9H9B4 322 aa18.32■□□□□ 0.52
FAM49B-214ENST00000519540 RNF112Q9ULX5 631 aa18.32■□□□□ 0.52
FAM49B-214ENST00000519540 PRRC2BQ5JSZ5 2229 aaKnown RBP18.32■□□□□ 0.52
FAM49B-214ENST00000519540 A8MUI8 341 aa18.32■□□□□ 0.52
FAM49B-214ENST00000519540 CDC7O00311 574 aa18.32■□□□□ 0.52
FAM49B-214ENST00000519540 NEMP1O14524 444 aa18.32■□□□□ 0.52
FAM49B-214ENST00000519540 HOXC11O43248 304 aaPredicted RBP18.32■□□□□ 0.52
FAM49B-214ENST00000519540 ATP6V1G2O95670 118 aa18.32■□□□□ 0.52
FAM49B-214ENST00000519540 LHCGRP22888 699 aa18.32■□□□□ 0.52
FAM49B-214ENST00000519540 NNMTP40261 264 aa18.32■□□□□ 0.52
FAM49B-214ENST00000519540 POLR2LP62875 67 aaKnown RBP18.32■□□□□ 0.52
FAM49B-214ENST00000519540 TSNQ15631 228 aaKnown RBP18.32■□□□□ 0.52
FAM49B-214ENST00000519540 PFKFB4Q16877 469 aa18.32■□□□□ 0.52
FAM49B-214ENST00000519540 LSM12Q3MHD2 195 aaKnown RBP18.32■□□□□ 0.52
FAM49B-214ENST00000519540 LYPLAL1Q5VWZ2 237 aa18.32■□□□□ 0.52
FAM49B-214ENST00000519540 CUZD1Q86UP6 607 aa18.32■□□□□ 0.52
FAM49B-214ENST00000519540 NPAS3Q8IXF0 933 aa18.32■□□□□ 0.52
FAM49B-214ENST00000519540 RBFAQ8N0V3 343 aa18.32■□□□□ 0.52
FAM49B-214ENST00000519540 FUBP1Q96AE4 644 aaKnown RBP18.32■□□□□ 0.52
FAM49B-214ENST00000519540 HEPHQ9BQS7 1158 aa18.32■□□□□ 0.52
FAM49B-214ENST00000519540 BOCQ9BWV1 1114 aa18.32■□□□□ 0.52
FAM49B-214ENST00000519540 CLPBQ9H078 707 aa18.32■□□□□ 0.52
FAM49B-214ENST00000519540 TNFRSF12AQ9NP84 129 aa18.32■□□□□ 0.52
FAM49B-214ENST00000519540 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.32■□□□□ 0.52
FAM49B-214ENST00000519540 DHRS7Q9Y394 339 aa18.32■□□□□ 0.52
FAM49B-214ENST00000519540 AGAP14A8MT82 685 aa18.31■□□□□ 0.52
FAM49B-214ENST00000519540 SPECC1L-ADORA2AF8WAN1 911 aa18.31■□□□□ 0.52
FAM49B-214ENST00000519540 UBFD1O14562 309 aaKnown RBP18.31■□□□□ 0.52
FAM49B-214ENST00000519540 ADH1CP00326 375 aa18.31■□□□□ 0.52
FAM49B-214ENST00000519540 ACRV1P26436 265 aa18.31■□□□□ 0.52
FAM49B-214ENST00000519540 PDCD2Q16342 344 aaPredicted RBP18.31■□□□□ 0.52
FAM49B-214ENST00000519540 ACAD11Q709F0 780 aa18.31■□□□□ 0.52
FAM49B-214ENST00000519540 RAB44Q7Z6P3 723 aaPredicted RBP18.31■□□□□ 0.52
FAM49B-214ENST00000519540 ASB16Q96NS5 453 aa18.31■□□□□ 0.52
FAM49B-214ENST00000519540 CCDC28BQ9BUN5 200 aa18.31■□□□□ 0.52
FAM49B-214ENST00000519540 CIPCQ9C0C6 399 aa18.31■□□□□ 0.52
FAM49B-214ENST00000519540 LMAN2LQ9H0V9 348 aa18.31■□□□□ 0.52
FAM49B-214ENST00000519540 CDYLQ9Y232 598 aa18.31■□□□□ 0.52
FAM49B-214ENST00000519540 WASF2Q9Y6W5 498 aa18.31■□□□□ 0.52
FAM49B-214ENST00000519540 TRPC5OSA6NMA1 111 aa18.3■□□□□ 0.52
FAM49B-214ENST00000519540 GOLGA8CPA6NN73 597 aa18.3■□□□□ 0.52
FAM49B-214ENST00000519540 BTN3A1O00481 513 aa18.3■□□□□ 0.52
FAM49B-214ENST00000519540 DCXO43602 365 aa18.3■□□□□ 0.52
FAM49B-214ENST00000519540 ECI2O75521 394 aa18.3■□□□□ 0.52
FAM49B-214ENST00000519540 VASPP50552 380 aaPredicted RBP18.3■□□□□ 0.52
FAM49B-214ENST00000519540 C2orf16Q68DN1 1984 aa18.3■□□□□ 0.52
FAM49B-214ENST00000519540 PTRHD1Q6GMV3 140 aaKnown RBP18.3■□□□□ 0.52
FAM49B-214ENST00000519540 C12orf40Q86WS4 652 aa18.3■□□□□ 0.52
FAM49B-214ENST00000519540 TMPRSS6Q8IU80 811 aa18.3■□□□□ 0.52
FAM49B-214ENST00000519540 CPNE9Q8IYJ1 553 aa18.3■□□□□ 0.52
FAM49B-214ENST00000519540 PHTF2Q8N3S3 785 aa18.3■□□□□ 0.52
FAM49B-214ENST00000519540 BPIFB1Q8TDL5 484 aa18.3■□□□□ 0.52
FAM49B-214ENST00000519540 LINGO1Q96FE5 620 aa18.3■□□□□ 0.52
FAM49B-214ENST00000519540 FAR2Q96K12 515 aa18.3■□□□□ 0.52
FAM49B-214ENST00000519540 PBX4Q9BYU1 374 aa18.3■□□□□ 0.52
FAM49B-214ENST00000519540 SARS2Q9NP81 518 aaKnown RBP18.3■□□□□ 0.52
FAM49B-214ENST00000519540 CRLS1Q9UJA2 301 aa18.3■□□□□ 0.52
FAM49B-214ENST00000519540 NPEPPSL1A6NEC2 478 aa18.3■□□□□ 0.52
FAM49B-214ENST00000519540 SYCE1LA8MT33 242 aa18.3■□□□□ 0.52
FAM49B-214ENST00000519540 SIX3O95343 332 aaPredicted RBP18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms