RNA–Protein interactions for RNA: ENST00000519489.1

CTNNA1-216, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 358 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-216ENST00000519489 PPP1CAP62136 330 aa6.67□□□□□ -1.34
CTNNA1-216ENST00000519489 DLG4P78352 724 aa6.67□□□□□ -1.34
CTNNA1-216ENST00000519489 ARF5P84085 180 aa6.67□□□□□ -1.34
CTNNA1-216ENST00000519489 ILF3Q12906 894 aaKnown RBP eCLIP6.67□□□□□ -1.34
CTNNA1-216ENST00000519489 BIRC3Q13489 604 aa6.67□□□□□ -1.34
CTNNA1-216ENST00000519489 ARHGAP17Q68EM7 881 aa6.67□□□□□ -1.34
CTNNA1-216ENST00000519489 C20orf204Q6ZNR8 217 aa6.67□□□□□ -1.34
CTNNA1-216ENST00000519489 Q6ZPB1 254 aaPredicted RBP6.67□□□□□ -1.34
CTNNA1-216ENST00000519489 ZZZ3Q8IYH5 903 aa6.67□□□□□ -1.34
CTNNA1-216ENST00000519489 NETO2Q8NC67 525 aa6.67□□□□□ -1.34
CTNNA1-216ENST00000519489 UBA3Q8TBC4 463 aa6.67□□□□□ -1.34
CTNNA1-216ENST00000519489 CA5BP1Q8WTZ4 195 aa6.67□□□□□ -1.34
CTNNA1-216ENST00000519489 WASF1Q92558 559 aa6.67□□□□□ -1.34
CTNNA1-216ENST00000519489 TMEM125Q96AQ2 219 aa6.67□□□□□ -1.34
CTNNA1-216ENST00000519489 NACC2Q96BF6 587 aa6.67□□□□□ -1.34
CTNNA1-216ENST00000519489 Q96MF0 132 aa6.67□□□□□ -1.34
CTNNA1-216ENST00000519489 TGM7Q96PF1 710 aa6.67□□□□□ -1.34
CTNNA1-216ENST00000519489 GBP5Q96PP8 586 aa6.67□□□□□ -1.34
CTNNA1-216ENST00000519489 C1QTNF7Q9BXJ2 289 aa6.67□□□□□ -1.34
CTNNA1-216ENST00000519489 NLNQ9BYT8 704 aa6.67□□□□□ -1.34
CTNNA1-216ENST00000519489 FRMD8Q9BZ67 464 aaPredicted RBP6.67□□□□□ -1.34
CTNNA1-216ENST00000519489 MUC3BQ9H195 1237 aa6.67□□□□□ -1.34
CTNNA1-216ENST00000519489 TRNAU1APQ9NX07 287 aaKnown RBP6.67□□□□□ -1.34
CTNNA1-216ENST00000519489 APEX2Q9UBZ4 518 aa6.67□□□□□ -1.34
CTNNA1-216ENST00000519489 L3MBTL1Q9Y468 752 aa6.67□□□□□ -1.34
CTNNA1-216ENST00000519489 SNX10Q9Y5X0 201 aa6.67□□□□□ -1.34
CTNNA1-216ENST00000519489 KCNU1A8MYU2 1149 aa6.66□□□□□ -1.34
CTNNA1-216ENST00000519489 FOXO6A8MYZ6 492 aa6.66□□□□□ -1.34
CTNNA1-216ENST00000519489 I6L893 689 aaPredicted RBP6.66□□□□□ -1.34
CTNNA1-216ENST00000519489 CACNB4O00305 520 aaPredicted RBP6.66□□□□□ -1.34
CTNNA1-216ENST00000519489 XPO1O14980 1071 aaKnown RBP6.66□□□□□ -1.34
CTNNA1-216ENST00000519489 CNOT3O75175 753 aaKnown RBP6.66□□□□□ -1.34
CTNNA1-216ENST00000519489 KLHL18O94889 574 aa6.66□□□□□ -1.34
CTNNA1-216ENST00000519489 IGLV3-25P01717 112 aa6.66□□□□□ -1.34
CTNNA1-216ENST00000519489 LTFP02788 710 aa6.66□□□□□ -1.34
CTNNA1-216ENST00000519489 RAF1P04049 648 aa6.66□□□□□ -1.34
CTNNA1-216ENST00000519489 NELFEP18615 380 aaKnown RBP6.66□□□□□ -1.34
CTNNA1-216ENST00000519489 CD53P19397 219 aa6.66□□□□□ -1.34
CTNNA1-216ENST00000519489 UGT1A4P22310 534 aa6.66□□□□□ -1.34
CTNNA1-216ENST00000519489 RORAP35398 523 aa6.66□□□□□ -1.34
CTNNA1-216ENST00000519489 RGS7P49802 495 aa6.66□□□□□ -1.34
CTNNA1-216ENST00000519489 LIG3P49916 1009 aa6.66□□□□□ -1.34
CTNNA1-216ENST00000519489 SERPINH1P50454 418 aaKnown RBP6.66□□□□□ -1.34
CTNNA1-216ENST00000519489 CYP2J2P51589 502 aa6.66□□□□□ -1.34
CTNNA1-216ENST00000519489 RAD23BP54727 409 aa6.66□□□□□ -1.34
CTNNA1-216ENST00000519489 PMP22Q01453 160 aa6.66□□□□□ -1.34
CTNNA1-216ENST00000519489 HHEXQ03014 270 aa6.66□□□□□ -1.34
CTNNA1-216ENST00000519489 AUHQ13825 339 aaKnown RBP6.66□□□□□ -1.34
CTNNA1-216ENST00000519489 DOC2BQ14184 412 aa6.66□□□□□ -1.34
CTNNA1-216ENST00000519489 GOLGA7BQ2TAP0 167 aa6.66□□□□□ -1.34
CTNNA1-216ENST00000519489 Q5PR19 223 aa6.66□□□□□ -1.34
CTNNA1-216ENST00000519489 C1orf220Q5T0J3 134 aa6.66□□□□□ -1.34
CTNNA1-216ENST00000519489 ATXN7L2Q5T6C5 722 aaPredicted RBP6.66□□□□□ -1.34
CTNNA1-216ENST00000519489 SHEQ5VZ18 495 aa6.66□□□□□ -1.34
CTNNA1-216ENST00000519489 PPP1R32Q7Z5V6 425 aa6.66□□□□□ -1.34
CTNNA1-216ENST00000519489 BTLAQ7Z6A9 289 aa6.66□□□□□ -1.34
CTNNA1-216ENST00000519489 ZSWIM9Q86XI8 627 aa6.66□□□□□ -1.34
CTNNA1-216ENST00000519489 ZNF683Q8IZ20 524 aa6.66□□□□□ -1.34
CTNNA1-216ENST00000519489 SCML4Q8N228 414 aa6.66□□□□□ -1.34
CTNNA1-216ENST00000519489 Q8N3U1 123 aa6.66□□□□□ -1.34
CTNNA1-216ENST00000519489 PCDH20Q8N6Y1 951 aaKnown RBP6.66□□□□□ -1.34
CTNNA1-216ENST00000519489 DCAF4L2Q8NA75 395 aa6.66□□□□□ -1.34
CTNNA1-216ENST00000519489 LARP4BQ92615 738 aaKnown RBP6.66□□□□□ -1.34
CTNNA1-216ENST00000519489 SH3KBP1Q96B97 665 aa6.66□□□□□ -1.34
CTNNA1-216ENST00000519489 CDK5RAP3Q96JB5 506 aa6.66□□□□□ -1.34
CTNNA1-216ENST00000519489 IPO9Q96P70 1041 aaKnown RBP6.66□□□□□ -1.34
CTNNA1-216ENST00000519489 MLPHQ9BV36 600 aaPredicted RBP6.66□□□□□ -1.34
CTNNA1-216ENST00000519489 SPRTNQ9H040 489 aaPredicted RBP6.66□□□□□ -1.34
CTNNA1-216ENST00000519489 LRRC4Q9HBW1 653 aa6.66□□□□□ -1.34
CTNNA1-216ENST00000519489 ANLNQ9NQW6 1124 aa6.66□□□□□ -1.34
CTNNA1-216ENST00000519489 P4HTMQ9NXG6 502 aa6.66□□□□□ -1.34
CTNNA1-216ENST00000519489 VANGL2Q9ULK5 521 aa6.66□□□□□ -1.34
CTNNA1-216ENST00000519489 HYDINQ4G0P3 5121 aa6.66□□□□□ -1.34
CTNNA1-216ENST00000519489 CHD5Q8TDI0 1954 aa6.66□□□□□ -1.34
CTNNA1-216ENST00000519489 IGHV5-51A0A0C4DH38 117 aa6.65□□□□□ -1.34
CTNNA1-216ENST00000519489 DRGXA6NNA5 263 aa6.65□□□□□ -1.34
CTNNA1-216ENST00000519489 FAM90A27PA6NNH2 459 aa6.65□□□□□ -1.34
CTNNA1-216ENST00000519489 KRIT1O00522 736 aa6.65□□□□□ -1.34
CTNNA1-216ENST00000519489 INSIG1O15503 277 aa6.65□□□□□ -1.34
CTNNA1-216ENST00000519489 TEX33O43247 280 aa6.65□□□□□ -1.34
CTNNA1-216ENST00000519489 RECQL5O94762 991 aaPredicted RBP6.65□□□□□ -1.34
CTNNA1-216ENST00000519489 EBLN1P0CF75 366 aa6.65□□□□□ -1.34
CTNNA1-216ENST00000519489 DEFA6Q01524 100 aa6.65□□□□□ -1.34
CTNNA1-216ENST00000519489 TUBB3Q13509 450 aa6.65□□□□□ -1.34
CTNNA1-216ENST00000519489 MYLK3Q32MK0 819 aa6.65□□□□□ -1.34
CTNNA1-216ENST00000519489 PMF1Q6P1K2 205 aa6.65□□□□□ -1.34
CTNNA1-216ENST00000519489 FGD2Q7Z6J4 655 aa6.65□□□□□ -1.34
CTNNA1-216ENST00000519489 SKAP1Q86WV1 359 aa6.65□□□□□ -1.34
CTNNA1-216ENST00000519489 DOLPP1Q86YN1 238 aa6.65□□□□□ -1.34
CTNNA1-216ENST00000519489 SPPL2CQ8IUH8 684 aa6.65□□□□□ -1.34
CTNNA1-216ENST00000519489 DSELQ8IZU8 1212 aa6.65□□□□□ -1.34
CTNNA1-216ENST00000519489 CLEC1AQ8NC01 280 aa6.65□□□□□ -1.34
CTNNA1-216ENST00000519489 AGAP11Q8TF27 550 aa6.65□□□□□ -1.34
CTNNA1-216ENST00000519489 FNIP1Q8TF40 1166 aa6.65□□□□□ -1.34
CTNNA1-216ENST00000519489 SLC41A2Q96JW4 573 aa6.65□□□□□ -1.34
CTNNA1-216ENST00000519489 BTN2A3PQ96KV6 586 aa6.65□□□□□ -1.34
CTNNA1-216ENST00000519489 RPRD1AQ96P16 312 aaPredicted RBP6.65□□□□□ -1.34
CTNNA1-216ENST00000519489 CEP44Q9C0F1 390 aa6.65□□□□□ -1.34
CTNNA1-216ENST00000519489 FOXP1Q9H334 677 aaPredicted RBP6.65□□□□□ -1.34
CTNNA1-216ENST00000519489 SARS2Q9NP81 518 aaKnown RBP6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms