RNA–Protein interactions for RNA: ENST00000518824.5

VEGFA-219, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-219ENST00000518824 CCDC97Q96F63 343 aaPredicted RBP13.18□□□□□ -0.3
VEGFA-219ENST00000518824 GSDMCQ9BYG8 508 aa13.18□□□□□ -0.3
VEGFA-219ENST00000518824 OR2AG1Q9H205 316 aa13.18□□□□□ -0.3
VEGFA-219ENST00000518824 SYNDIG1Q9H7V2 258 aa13.18□□□□□ -0.3
VEGFA-219ENST00000518824 PIH1D1Q9NWS0 290 aaKnown RBP13.18□□□□□ -0.3
VEGFA-219ENST00000518824 SLC23A2Q9UGH3 650 aa13.18□□□□□ -0.3
VEGFA-219ENST00000518824 ATXN7L1Q9ULK2 861 aaPredicted RBP13.18□□□□□ -0.3
VEGFA-219ENST00000518824 KCNK6Q9Y257 313 aa13.18□□□□□ -0.3
VEGFA-219ENST00000518824 ZNF106Q9H2Y7 1883 aaKnown RBP13.18□□□□□ -0.3
VEGFA-219ENST00000518824 AGRPO00253 132 aa13.17□□□□□ -0.3
VEGFA-219ENST00000518824 CCL22O00626 93 aa13.17□□□□□ -0.3
VEGFA-219ENST00000518824 NTN3O00634 580 aaPredicted RBP13.17□□□□□ -0.3
VEGFA-219ENST00000518824 ANXA9O76027 345 aa13.17□□□□□ -0.3
VEGFA-219ENST00000518824 TPH1P17752 444 aa13.17□□□□□ -0.3
VEGFA-219ENST00000518824 RPIAP49247 311 aa13.17□□□□□ -0.3
VEGFA-219ENST00000518824 ILF3Q12906 894 aaKnown RBP eCLIP13.17□□□□□ -0.3
VEGFA-219ENST00000518824 PLA2G4EQ3MJ16 856 aa13.17□□□□□ -0.3
VEGFA-219ENST00000518824 ZNF569Q5MCW4 686 aa13.17□□□□□ -0.3
VEGFA-219ENST00000518824 CERCAMQ5T4B2 595 aa13.17□□□□□ -0.3
VEGFA-219ENST00000518824 CRTC3Q6UUV7 619 aa13.17□□□□□ -0.3
VEGFA-219ENST00000518824 B3GNT8Q7Z7M8 397 aa13.17□□□□□ -0.3
VEGFA-219ENST00000518824 GALNT13Q8IUC8 556 aa13.17□□□□□ -0.3
VEGFA-219ENST00000518824 ARL14Q8N4G2 192 aa13.17□□□□□ -0.3
VEGFA-219ENST00000518824 PDCD7Q8N8D1 485 aaKnown RBP13.17□□□□□ -0.3
VEGFA-219ENST00000518824 OR13C4Q8NGS5 318 aa13.17□□□□□ -0.3
VEGFA-219ENST00000518824 GLMNQ92990 594 aa13.17□□□□□ -0.3
VEGFA-219ENST00000518824 NAT6Q93015 286 aa13.17□□□□□ -0.3
VEGFA-219ENST00000518824 TBL1YQ9BQ87 522 aa13.17□□□□□ -0.3
VEGFA-219ENST00000518824 ZSCAN5AQ9BUG6 496 aa13.17□□□□□ -0.3
VEGFA-219ENST00000518824 ABCG4Q9H172 646 aa13.17□□□□□ -0.3
VEGFA-219ENST00000518824 CCDC86Q9H6F5 360 aaKnown RBP13.17□□□□□ -0.3
VEGFA-219ENST00000518824 NCKIPSDQ9NZQ3 722 aa13.17□□□□□ -0.3
VEGFA-219ENST00000518824 VPS18Q9P253 973 aa13.17□□□□□ -0.3
VEGFA-219ENST00000518824 ENTPD2Q9Y5L3 495 aa13.17□□□□□ -0.3
VEGFA-219ENST00000518824 UNC13CQ8NB66 2214 aa13.16□□□□□ -0.3
VEGFA-219ENST00000518824 SRRM3A6NNA2 597 aaPredicted RBP13.16□□□□□ -0.3
VEGFA-219ENST00000518824 PPM1DO15297 605 aa13.16□□□□□ -0.3
VEGFA-219ENST00000518824 B4GAT1O43505 415 aa13.16□□□□□ -0.3
VEGFA-219ENST00000518824 NUAK1O60285 661 aa13.16□□□□□ -0.3
VEGFA-219ENST00000518824 STK10O94804 968 aaKnown RBP13.16□□□□□ -0.3
VEGFA-219ENST00000518824 ZSCAN5DPP0CG00 497 aa13.16□□□□□ -0.3
VEGFA-219ENST00000518824 ACP5P13686 325 aa13.16□□□□□ -0.3
VEGFA-219ENST00000518824 TMPRSS15P98073 1019 aa13.16□□□□□ -0.3
VEGFA-219ENST00000518824 PRPSAP1Q14558 356 aa13.16□□□□□ -0.3
VEGFA-219ENST00000518824 ISXQ2M1V0 245 aa13.16□□□□□ -0.3
VEGFA-219ENST00000518824 PARP6Q2NL67 630 aa13.16□□□□□ -0.3
VEGFA-219ENST00000518824 ARHGEF18Q6ZSZ5 1173 aa13.16□□□□□ -0.3
VEGFA-219ENST00000518824 ZNF761Q86XN6 746 aaPredicted RBP13.16□□□□□ -0.3
VEGFA-219ENST00000518824 PROSER1Q86XN7 944 aa13.16□□□□□ -0.3
VEGFA-219ENST00000518824 ZNF547Q8IVP9 402 aa13.16□□□□□ -0.3
VEGFA-219ENST00000518824 OR4K2Q8NGD2 314 aa13.16□□□□□ -0.3
VEGFA-219ENST00000518824 RTP4Q96DX8 246 aa13.16□□□□□ -0.3
VEGFA-219ENST00000518824 ATXN7L3BQ96GX2 97 aa13.16□□□□□ -0.3
VEGFA-219ENST00000518824 PLEKHG4BQ96PX9 1271 aa13.16□□□□□ -0.3
VEGFA-219ENST00000518824 FOXP3Q9BZS1 431 aa13.16□□□□□ -0.3
VEGFA-219ENST00000518824 CDH19Q9H159 772 aa13.16□□□□□ -0.3
VEGFA-219ENST00000518824 CARD9Q9H257 536 aa13.16□□□□□ -0.3
VEGFA-219ENST00000518824 TRABDQ9H4I3 376 aa13.16□□□□□ -0.3
VEGFA-219ENST00000518824 TRIM39Q9HCM9 518 aa13.16□□□□□ -0.3
VEGFA-219ENST00000518824 EVA1BQ9NVM1 165 aa13.16□□□□□ -0.3
VEGFA-219ENST00000518824 LRIT1Q9P2V4 623 aa13.16□□□□□ -0.3
VEGFA-219ENST00000518824 TBC1D29Q9UFV1 150 aa13.16□□□□□ -0.3
VEGFA-219ENST00000518824 FKBPLQ9UIM3 349 aa13.16□□□□□ -0.3
VEGFA-219ENST00000518824 RAXQ9Y2V3 346 aa13.16□□□□□ -0.3
VEGFA-219ENST00000518824 AAR2Q9Y312 384 aaKnown RBP13.16□□□□□ -0.3
VEGFA-219ENST00000518824 APC2O95996 2303 aa13.16□□□□□ -0.3
VEGFA-219ENST00000518824 FREM2Q5SZK8 3169 aa13.15□□□□□ -0.3
VEGFA-219ENST00000518824 GRID2O43424 1007 aa13.15□□□□□ -0.3
VEGFA-219ENST00000518824 TLX3O43711 291 aaPredicted RBP13.15□□□□□ -0.3
VEGFA-219ENST00000518824 MPOP05164 745 aa13.15□□□□□ -0.3
VEGFA-219ENST00000518824 RPLP0P05388 317 aaKnown RBP13.15□□□□□ -0.3
VEGFA-219ENST00000518824 PRSS56P0CW18 603 aa13.15□□□□□ -0.3
VEGFA-219ENST00000518824 GLB1P16278 677 aa13.15□□□□□ -0.3
VEGFA-219ENST00000518824 SPAM1P38567 509 aa13.15□□□□□ -0.3
VEGFA-219ENST00000518824 GRIA1P42261 906 aa13.15□□□□□ -0.3
VEGFA-219ENST00000518824 KCNJ1P48048 391 aa13.15□□□□□ -0.3
VEGFA-219ENST00000518824 CTSCP53634 463 aa13.15□□□□□ -0.3
VEGFA-219ENST00000518824 OR1D5P58170 312 aa13.15□□□□□ -0.3
VEGFA-219ENST00000518824 XIAPP98170 497 aa13.15□□□□□ -0.3
VEGFA-219ENST00000518824 B4GALNT1Q00973 533 aa13.15□□□□□ -0.3
VEGFA-219ENST00000518824 TAF1AQ15573 450 aaPredicted RBP13.15□□□□□ -0.3
VEGFA-219ENST00000518824 CCNJLQ8IV13 435 aa13.15□□□□□ -0.3
VEGFA-219ENST00000518824 CACTIN-AS1Q8N1I8 211 aa13.15□□□□□ -0.3
VEGFA-219ENST00000518824 SLC37A2Q8TED4 501 aa13.15□□□□□ -0.3
VEGFA-219ENST00000518824 ALS2CR12Q96Q35 445 aa13.15□□□□□ -0.3
VEGFA-219ENST00000518824 SRPK1Q96SB4 655 aaKnown RBP13.15□□□□□ -0.3
VEGFA-219ENST00000518824 FERMT1Q9BQL6 677 aa13.15□□□□□ -0.3
VEGFA-219ENST00000518824 LRRN3Q9H3W5 708 aa13.15□□□□□ -0.3
VEGFA-219ENST00000518824 ETNK1Q9HBU6 452 aa13.15□□□□□ -0.3
VEGFA-219ENST00000518824 SMARCAL1Q9NZC9 954 aa13.15□□□□□ -0.3
VEGFA-219ENST00000518824 HACD3Q9P035 362 aa13.15□□□□□ -0.3
VEGFA-219ENST00000518824 SCHIP1Q9P0W5 487 aaPredicted RBP13.15□□□□□ -0.3
VEGFA-219ENST00000518824 DMXL2Q8TDJ6 3036 aa13.14□□□□□ -0.31
VEGFA-219ENST00000518824 PRAMEF33A0A0G2JMD5 474 aa13.14□□□□□ -0.31
VEGFA-219ENST00000518824 GLYATL1P3A0A0U1RQE8 302 aa13.14□□□□□ -0.31
VEGFA-219ENST00000518824 CCDC78A2IDD5 438 aa13.14□□□□□ -0.31
VEGFA-219ENST00000518824 A6NCN8 305 aa13.14□□□□□ -0.31
VEGFA-219ENST00000518824 TMEM8BA6NDV4 472 aa13.14□□□□□ -0.31
VEGFA-219ENST00000518824 CHUKO15111 745 aa13.14□□□□□ -0.31
VEGFA-219ENST00000518824 STX7O15400 261 aaKnown RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms