RNA–Protein interactions for RNA: ENST00000518060.5

SPIDR-205, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SPIDR, Length 482 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-205ENST00000518060 B4GAT1O43505 415 aa10.47□□□□□ -0.73
SPIDR-205ENST00000518060 DUX1O43812 170 aa10.47□□□□□ -0.73
SPIDR-205ENST00000518060 DNAJC6O75061 913 aa10.47□□□□□ -0.73
SPIDR-205ENST00000518060 MTX2O75431 263 aa10.47□□□□□ -0.73
SPIDR-205ENST00000518060 LCA5LO95447 670 aa10.47□□□□□ -0.73
SPIDR-205ENST00000518060 SLC2A4P14672 509 aa10.47□□□□□ -0.73
SPIDR-205ENST00000518060 ZNF8P17098 575 aaPredicted RBP10.47□□□□□ -0.73
SPIDR-205ENST00000518060 ADCY2Q08462 1091 aa10.47□□□□□ -0.73
SPIDR-205ENST00000518060 WASHC5Q12768 1159 aa10.47□□□□□ -0.73
SPIDR-205ENST00000518060 GTF2H3Q13889 308 aa10.47□□□□□ -0.73
SPIDR-205ENST00000518060 C16orf72Q14CZ0 275 aa10.47□□□□□ -0.73
SPIDR-205ENST00000518060 SEPT7Q16181 437 aaKnown RBP10.47□□□□□ -0.73
SPIDR-205ENST00000518060 TAZQ16635 292 aa10.47□□□□□ -0.73
SPIDR-205ENST00000518060 INSCQ1MX18 579 aa10.47□□□□□ -0.73
SPIDR-205ENST00000518060 TAF1BQ53T94 588 aaPredicted RBP10.47□□□□□ -0.73
SPIDR-205ENST00000518060 SNAP47Q5SQN1 464 aa10.47□□□□□ -0.73
SPIDR-205ENST00000518060 TMPRSS9Q7Z410 1059 aa10.47□□□□□ -0.73
SPIDR-205ENST00000518060 ZNF438Q7Z4V0 828 aa10.47□□□□□ -0.73
SPIDR-205ENST00000518060 CLEC14AQ86T13 490 aa10.47□□□□□ -0.73
SPIDR-205ENST00000518060 C17orf82Q86X59 251 aaPredicted RBP10.47□□□□□ -0.73
SPIDR-205ENST00000518060 SLITRK4Q8IW52 837 aa10.47□□□□□ -0.73
SPIDR-205ENST00000518060 RAVER1Q8IY67 606 aaKnown RBP10.47□□□□□ -0.73
SPIDR-205ENST00000518060 TRAM1L1Q8N609 369 aa10.47□□□□□ -0.73
SPIDR-205ENST00000518060 RCBTB1Q8NDN9 531 aa10.47□□□□□ -0.73
SPIDR-205ENST00000518060 GPR26Q8NDV2 337 aa10.47□□□□□ -0.73
SPIDR-205ENST00000518060 ACRBPQ8NEB7 543 aa10.47□□□□□ -0.73
SPIDR-205ENST00000518060 OR10G6Q8NH81 332 aa10.47□□□□□ -0.73
SPIDR-205ENST00000518060 BLOC1S5Q8TDH9 187 aa10.47□□□□□ -0.73
SPIDR-205ENST00000518060 HTR3CQ8WXA8 447 aa10.47□□□□□ -0.73
SPIDR-205ENST00000518060 SCARF2Q96GP6 870 aaPredicted RBP10.47□□□□□ -0.73
SPIDR-205ENST00000518060 MRFAP1L1Q96HT8 127 aa10.47□□□□□ -0.73
SPIDR-205ENST00000518060 BBC3Q96PG8 261 aaPredicted RBP10.47□□□□□ -0.73
SPIDR-205ENST00000518060 C10orf88Q9H8K7 445 aa10.47□□□□□ -0.73
SPIDR-205ENST00000518060 RMI1Q9H9A7 625 aa10.47□□□□□ -0.73
SPIDR-205ENST00000518060 MAGEE1Q9HCI5 957 aa10.47□□□□□ -0.73
SPIDR-205ENST00000518060 ATXN10Q9UBB4 475 aa10.47□□□□□ -0.73
SPIDR-205ENST00000518060 TBC1D29Q9UFV1 150 aa10.47□□□□□ -0.73
SPIDR-205ENST00000518060 CNOT6Q9ULM6 557 aaKnown RBP10.47□□□□□ -0.73
SPIDR-205ENST00000518060 DNAJC16Q9Y2G8 782 aa10.47□□□□□ -0.73
SPIDR-205ENST00000518060 PCYT1BQ9Y5K3 369 aaPredicted RBP10.47□□□□□ -0.73
SPIDR-205ENST00000518060 EPN1Q9Y6I3 576 aaPredicted RBP10.47□□□□□ -0.73
SPIDR-205ENST00000518060 PTPRQQ9UMZ3 2332 aa10.46□□□□□ -0.73
SPIDR-205ENST00000518060 PRAMEF33A0A0G2JMD5 474 aa10.46□□□□□ -0.73
SPIDR-205ENST00000518060 TEX51A0A1B0GUA7 166 aa10.46□□□□□ -0.73
SPIDR-205ENST00000518060 PDZK1P1A8MUH7 402 aa10.46□□□□□ -0.73
SPIDR-205ENST00000518060 HACD1B0YJ81 288 aa10.46□□□□□ -0.73
SPIDR-205ENST00000518060 AURKAO14965 403 aa10.46□□□□□ -0.73
SPIDR-205ENST00000518060 PRAMEF10O60809 474 aa10.46□□□□□ -0.73
SPIDR-205ENST00000518060 STK10O94804 968 aaKnown RBP10.46□□□□□ -0.73
SPIDR-205ENST00000518060 EML2O95834 649 aa10.46□□□□□ -0.73
SPIDR-205ENST00000518060 BPIP17213 487 aa10.46□□□□□ -0.73
SPIDR-205ENST00000518060 CD1CP29017 333 aa10.46□□□□□ -0.73
SPIDR-205ENST00000518060 CSF2RBP32927 897 aa10.46□□□□□ -0.73
SPIDR-205ENST00000518060 CSTF2P33240 577 aaKnown RBP eCLIP10.46□□□□□ -0.73
SPIDR-205ENST00000518060 CD68P34810 354 aaPredicted RBP10.46□□□□□ -0.73
SPIDR-205ENST00000518060 ETV5P41161 510 aa10.46□□□□□ -0.73
SPIDR-205ENST00000518060 CETN2P41208 172 aa10.46□□□□□ -0.73
SPIDR-205ENST00000518060 CHRNA4P43681 627 aa10.46□□□□□ -0.73
SPIDR-205ENST00000518060 GPR3P46089 330 aa10.46□□□□□ -0.73
SPIDR-205ENST00000518060 DCDC1P59894 354 aa10.46□□□□□ -0.73
SPIDR-205ENST00000518060 HHEXQ03014 270 aa10.46□□□□□ -0.73
SPIDR-205ENST00000518060 ZFP36L1Q07352 338 aaKnown RBP10.46□□□□□ -0.73
SPIDR-205ENST00000518060 CLN3Q13286 438 aa10.46□□□□□ -0.73
SPIDR-205ENST00000518060 SLC14A2Q15849 920 aa10.46□□□□□ -0.73
SPIDR-205ENST00000518060 PPP2R5EQ16537 467 aa10.46□□□□□ -0.73
SPIDR-205ENST00000518060 SIRPB2Q5JXA9 342 aa10.46□□□□□ -0.73
SPIDR-205ENST00000518060 TMEM164Q5U3C3 297 aa10.46□□□□□ -0.73
SPIDR-205ENST00000518060 FAM151BQ6UXP7 276 aa10.46□□□□□ -0.73
SPIDR-205ENST00000518060 CCDC81Q6ZN84 652 aa10.46□□□□□ -0.73
SPIDR-205ENST00000518060 BBS12Q6ZW61 710 aa10.46□□□□□ -0.73
SPIDR-205ENST00000518060 GLT6D1Q7Z4J2 308 aa10.46□□□□□ -0.73
SPIDR-205ENST00000518060 TMC3Q7Z5M5 1100 aa10.46□□□□□ -0.73
SPIDR-205ENST00000518060 TRAPPC5Q8IUR0 188 aa10.46□□□□□ -0.73
SPIDR-205ENST00000518060 CDKL3Q8IVW4 592 aaPredicted RBP10.46□□□□□ -0.73
SPIDR-205ENST00000518060 TRIM48Q8IWZ4 208 aa10.46□□□□□ -0.73
SPIDR-205ENST00000518060 ZNF567Q8N184 647 aa10.46□□□□□ -0.73
SPIDR-205ENST00000518060 CCDC112Q8NEF3 446 aa10.46□□□□□ -0.73
SPIDR-205ENST00000518060 USP7Q93009 1102 aa10.46□□□□□ -0.73
SPIDR-205ENST00000518060 GLYATL1Q969I3 302 aa10.46□□□□□ -0.73
SPIDR-205ENST00000518060 TMEM159Q96B96 161 aa10.46□□□□□ -0.73
SPIDR-205ENST00000518060 EID2BQ96D98 161 aa10.46□□□□□ -0.73
SPIDR-205ENST00000518060 SRPK1Q96SB4 655 aaKnown RBP10.46□□□□□ -0.73
SPIDR-205ENST00000518060 VAT1Q99536 393 aa10.46□□□□□ -0.73
SPIDR-205ENST00000518060 FAM118BQ9BPY3 351 aa10.46□□□□□ -0.73
SPIDR-205ENST00000518060 HERPUD2Q9BSE4 406 aa10.46□□□□□ -0.73
SPIDR-205ENST00000518060 FICDQ9BVA6 458 aa10.46□□□□□ -0.73
SPIDR-205ENST00000518060 CARD9Q9H257 536 aa10.46□□□□□ -0.73
SPIDR-205ENST00000518060 KLC4Q9NSK0 619 aa10.46□□□□□ -0.73
SPIDR-205ENST00000518060 KLHL3Q9UH77 587 aa10.46□□□□□ -0.73
SPIDR-205ENST00000518060 IGHV1OR21-1A0A087WYE8 117 aa10.45□□□□□ -0.74
SPIDR-205ENST00000518060 IGHV5-10-1A0A0J9YXX1 117 aa10.45□□□□□ -0.74
SPIDR-205ENST00000518060 RCCD1A6NED2 376 aa10.45□□□□□ -0.74
SPIDR-205ENST00000518060 A8MU76 341 aa10.45□□□□□ -0.74
SPIDR-205ENST00000518060 APOC4-APOC2K7ER74 178 aa10.45□□□□□ -0.74
SPIDR-205ENST00000518060 BUD23O43709 281 aaKnown RBP10.45□□□□□ -0.74
SPIDR-205ENST00000518060 NUAK1O60285 661 aa10.45□□□□□ -0.74
SPIDR-205ENST00000518060 APOC2P02655 101 aa10.45□□□□□ -0.74
SPIDR-205ENST00000518060 PRB1P04280 392 aa10.45□□□□□ -0.74
SPIDR-205ENST00000518060 RBL1P28749 1068 aa10.45□□□□□ -0.74
SPIDR-205ENST00000518060 CTNNA1P35221 906 aaKnown RBP10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms