RNA–Protein interactions for RNA: ENST00000516956.1

SCARNA16.4-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 187 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.4-201ENST00000516956 GRID2O43424 1007 aa5.4□□□□□ -1.54
SCARNA16.4-201ENST00000516956 FTH1P02794 183 aa5.4□□□□□ -1.54
SCARNA16.4-201ENST00000516956 ANXA6P08133 673 aa5.4□□□□□ -1.54
SCARNA16.4-201ENST00000516956 ZNF806P0C7X5 589 aa5.4□□□□□ -1.54
SCARNA16.4-201ENST00000516956 GPR89BP0CG08 455 aa5.4□□□□□ -1.54
SCARNA16.4-201ENST00000516956 SLC2A4P14672 509 aa5.4□□□□□ -1.54
SCARNA16.4-201ENST00000516956 JUNDP17535 347 aa5.4□□□□□ -1.54
SCARNA16.4-201ENST00000516956 ENGP17813 658 aa5.4□□□□□ -1.54
SCARNA16.4-201ENST00000516956 TRIM23P36406 574 aa5.4□□□□□ -1.54
SCARNA16.4-201ENST00000516956 NSG1P42857 185 aa5.4□□□□□ -1.54
SCARNA16.4-201ENST00000516956 GNPDA1P46926 289 aa5.4□□□□□ -1.54
SCARNA16.4-201ENST00000516956 CARSP49589 748 aaKnown RBP5.4□□□□□ -1.54
SCARNA16.4-201ENST00000516956 CCT8P50990 548 aa5.4□□□□□ -1.54
SCARNA16.4-201ENST00000516956 NXPH1P58417 271 aa5.4□□□□□ -1.54
SCARNA16.4-201ENST00000516956 PFN3P60673 137 aa5.4□□□□□ -1.54
SCARNA16.4-201ENST00000516956 SRP54P61011 504 aaKnown RBP5.4□□□□□ -1.54
SCARNA16.4-201ENST00000516956 CDK3Q00526 305 aa5.4□□□□□ -1.54
SCARNA16.4-201ENST00000516956 MGAT5Q09328 741 aa5.4□□□□□ -1.54
SCARNA16.4-201ENST00000516956 SPEM2Q0P670 501 aa5.4□□□□□ -1.54
SCARNA16.4-201ENST00000516956 TMEM115Q12893 351 aaPredicted RBP5.4□□□□□ -1.54
SCARNA16.4-201ENST00000516956 FGL2Q14314 439 aa5.4□□□□□ -1.54
SCARNA16.4-201ENST00000516956 KRT33BQ14525 404 aa5.4□□□□□ -1.54
SCARNA16.4-201ENST00000516956 ITIH4Q14624 930 aa5.4□□□□□ -1.54
SCARNA16.4-201ENST00000516956 PTPRCAPQ14761 206 aa5.4□□□□□ -1.54
SCARNA16.4-201ENST00000516956 CRYMQ14894 314 aa5.4□□□□□ -1.54
SCARNA16.4-201ENST00000516956 TMED2Q15363 201 aa5.4□□□□□ -1.54
SCARNA16.4-201ENST00000516956 ELOCQ15369 112 aa5.4□□□□□ -1.54
SCARNA16.4-201ENST00000516956 CCDC6Q16204 474 aa5.4□□□□□ -1.54
SCARNA16.4-201ENST00000516956 CSRP2Q16527 193 aa5.4□□□□□ -1.54
SCARNA16.4-201ENST00000516956 INSCQ1MX18 579 aa5.4□□□□□ -1.54
SCARNA16.4-201ENST00000516956 KIF19Q2TAC6 998 aa5.4□□□□□ -1.54
SCARNA16.4-201ENST00000516956 UAP1L1Q3KQV9 507 aa5.4□□□□□ -1.54
SCARNA16.4-201ENST00000516956 ATP13A5Q4VNC0 1218 aa5.4□□□□□ -1.54
SCARNA16.4-201ENST00000516956 SYTL3Q4VX76 610 aa5.4□□□□□ -1.54
SCARNA16.4-201ENST00000516956 GPRC6AQ5T6X5 926 aa5.4□□□□□ -1.54
SCARNA16.4-201ENST00000516956 HENMT1Q5T8I9 393 aaKnown RBP5.4□□□□□ -1.54
SCARNA16.4-201ENST00000516956 LGSNQ5TDP6 509 aa5.4□□□□□ -1.54
SCARNA16.4-201ENST00000516956 SLC23A3Q6PIS1 610 aa5.4□□□□□ -1.54
SCARNA16.4-201ENST00000516956 TMEM220Q6QAJ8 160 aa5.4□□□□□ -1.54
SCARNA16.4-201ENST00000516956 RFLNAQ6ZTI6 216 aa5.4□□□□□ -1.54
SCARNA16.4-201ENST00000516956 C3orf62Q6ZUJ4 267 aa5.4□□□□□ -1.54
SCARNA16.4-201ENST00000516956 ZNF534Q76KX8 674 aa5.4□□□□□ -1.54
SCARNA16.4-201ENST00000516956 DET1Q7L5Y6 550 aa5.4□□□□□ -1.54
SCARNA16.4-201ENST00000516956 CHST15Q7LFX5 561 aaPredicted RBP5.4□□□□□ -1.54
SCARNA16.4-201ENST00000516956 TAF8Q7Z7C8 310 aa5.4□□□□□ -1.54
SCARNA16.4-201ENST00000516956 ABI3BPQ7Z7G0 1075 aa5.4□□□□□ -1.54
SCARNA16.4-201ENST00000516956 LRRTM4Q86VH4 590 aa5.4□□□□□ -1.54
SCARNA16.4-201ENST00000516956 SERPINA9Q86WD7 417 aa5.4□□□□□ -1.54
SCARNA16.4-201ENST00000516956 LRRC6Q86X45 466 aa5.4□□□□□ -1.54
SCARNA16.4-201ENST00000516956 GKN2Q86XP6 184 aa5.4□□□□□ -1.54
SCARNA16.4-201ENST00000516956 TRAPPC5Q8IUR0 188 aa5.4□□□□□ -1.54
SCARNA16.4-201ENST00000516956 NXPE1Q8N323 547 aa5.4□□□□□ -1.54
SCARNA16.4-201ENST00000516956 FSTL5Q8N475 847 aaPredicted RBP5.4□□□□□ -1.54
SCARNA16.4-201ENST00000516956 EIF1ADQ8N9N8 165 aaKnown RBP5.4□□□□□ -1.54
SCARNA16.4-201ENST00000516956 TMEM145Q8NBT3 493 aa5.4□□□□□ -1.54
SCARNA16.4-201ENST00000516956 PLA2G15Q8NCC3 412 aa5.4□□□□□ -1.54
SCARNA16.4-201ENST00000516956 FUBP1Q96AE4 644 aaKnown RBP5.4□□□□□ -1.54
SCARNA16.4-201ENST00000516956 MFSD3Q96ES6 412 aa5.4□□□□□ -1.54
SCARNA16.4-201ENST00000516956 BMFQ96LC9 184 aa5.4□□□□□ -1.54
SCARNA16.4-201ENST00000516956 C9orf72Q96LT7 481 aa5.4□□□□□ -1.54
SCARNA16.4-201ENST00000516956 VPS35Q96QK1 796 aa5.4□□□□□ -1.54
SCARNA16.4-201ENST00000516956 PANX3Q96QZ0 392 aa5.4□□□□□ -1.54
SCARNA16.4-201ENST00000516956 AGAP2Q99490 1192 aa5.4□□□□□ -1.54
SCARNA16.4-201ENST00000516956 KLF6Q99612 283 aaPredicted RBP5.4□□□□□ -1.54
SCARNA16.4-201ENST00000516956 TEX101Q9BY14 249 aa5.4□□□□□ -1.54
SCARNA16.4-201ENST00000516956 GSDMCQ9BYG8 508 aa5.4□□□□□ -1.54
SCARNA16.4-201ENST00000516956 OR2AG1Q9H205 316 aa5.4□□□□□ -1.54
SCARNA16.4-201ENST00000516956 OSGEPL1Q9H4B0 414 aa5.4□□□□□ -1.54
SCARNA16.4-201ENST00000516956 STN1Q9H668 368 aaKnown RBP5.4□□□□□ -1.54
SCARNA16.4-201ENST00000516956 GAREM1Q9H706 876 aa5.4□□□□□ -1.54
SCARNA16.4-201ENST00000516956 ERVMER34-1Q9H9K5 563 aa5.4□□□□□ -1.54
SCARNA16.4-201ENST00000516956 CARS2Q9HA77 564 aaKnown RBP5.4□□□□□ -1.54
SCARNA16.4-201ENST00000516956 TMEM9BQ9NQ34 198 aa5.4□□□□□ -1.54
SCARNA16.4-201ENST00000516956 IARS2Q9NSE4 1012 aaKnown RBP5.4□□□□□ -1.54
SCARNA16.4-201ENST00000516956 SEMA4GQ9NTN9 838 aa5.4□□□□□ -1.54
SCARNA16.4-201ENST00000516956 ARGLU1Q9NWB6 273 aaPredicted RBP5.4□□□□□ -1.54
SCARNA16.4-201ENST00000516956 ZDHHC3Q9NYG2 299 aa5.4□□□□□ -1.54
SCARNA16.4-201ENST00000516956 GRHL1Q9NZI5 618 aa5.4□□□□□ -1.54
SCARNA16.4-201ENST00000516956 VPS18Q9P253 973 aa5.4□□□□□ -1.54
SCARNA16.4-201ENST00000516956 SLC2A6Q9UGQ3 507 aa5.4□□□□□ -1.54
SCARNA16.4-201ENST00000516956 APOBEC3BQ9UH17 382 aaKnown RBP5.4□□□□□ -1.54
SCARNA16.4-201ENST00000516956 GNPTGQ9UJJ9 305 aa5.4□□□□□ -1.54
SCARNA16.4-201ENST00000516956 TMEM98Q9Y2Y6 226 aa5.4□□□□□ -1.54
SCARNA16.4-201ENST00000516956 SNX11Q9Y5W9 270 aa5.4□□□□□ -1.54
SCARNA16.4-201ENST00000516956 DYNC1LI1Q9Y6G9 523 aaKnown RBP5.4□□□□□ -1.54
SCARNA16.4-201ENST00000516956 KMT2EQ8IZD2 1858 aa5.4□□□□□ -1.55
SCARNA16.4-201ENST00000516956 A0A087WUV0 522 aaPredicted RBP5.39□□□□□ -1.55
SCARNA16.4-201ENST00000516956 SPTY2D1-AS1A0A0U1RR47 76 aa5.39□□□□□ -1.55
SCARNA16.4-201ENST00000516956 A0A1W2PR77 199 aa5.39□□□□□ -1.55
SCARNA16.4-201ENST00000516956 PRSS38A1L453 326 aa5.39□□□□□ -1.55
SCARNA16.4-201ENST00000516956 KLHL33A6NCF5 533 aa5.39□□□□□ -1.55
SCARNA16.4-201ENST00000516956 OR51F1A6NGY5 319 aa5.39□□□□□ -1.55
SCARNA16.4-201ENST00000516956 FADS2P1A8MWK0 482 aa5.39□□□□□ -1.55
SCARNA16.4-201ENST00000516956 GOLGA8KD6RF30 607 aa5.39□□□□□ -1.55
SCARNA16.4-201ENST00000516956 E7ESA3 106 aa5.39□□□□□ -1.55
SCARNA16.4-201ENST00000516956 H0Y8X5 98 aa5.39□□□□□ -1.55
SCARNA16.4-201ENST00000516956 GOLGA8TH3BQL2 631 aa5.39□□□□□ -1.55
SCARNA16.4-201ENST00000516956 K7ESM1 405 aa5.39□□□□□ -1.55
SCARNA16.4-201ENST00000516956 KPNA5O15131 536 aa5.39□□□□□ -1.55
SCARNA16.4-201ENST00000516956 KDM1AO60341 852 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms