RNA–Protein interactions for RNA: ENST00000516850.1

RNU6-1088P-201, Transcript of RNA, U6 small nuclear 1088, pseudogene, humanhuman

BASIC

Gene RNU6-1088P, Length 104 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1088P-201ENST00000516850 PHF21AQ96BD5 680 aa2.65□□□□□ -1.99
RNU6-1088P-201ENST00000516850 ARHGEF26Q96DR7 871 aa2.65□□□□□ -1.99
RNU6-1088P-201ENST00000516850 ART5Q96L15 291 aa2.65□□□□□ -1.99
RNU6-1088P-201ENST00000516850 LINC00479Q96M42 142 aa2.65□□□□□ -1.99
RNU6-1088P-201ENST00000516850 TMEM68Q96MH6 324 aa2.65□□□□□ -1.99
RNU6-1088P-201ENST00000516850 ARPC5LQ9BPX5 153 aa2.65□□□□□ -1.99
RNU6-1088P-201ENST00000516850 LBHD1Q9BQE6 289 aaPredicted RBP2.65□□□□□ -1.99
RNU6-1088P-201ENST00000516850 SIL1Q9H173 461 aa2.65□□□□□ -1.99
RNU6-1088P-201ENST00000516850 KIF9Q9HAQ2 790 aa2.65□□□□□ -1.99
RNU6-1088P-201ENST00000516850 SLC28A3Q9HAS3 691 aa2.65□□□□□ -1.99
RNU6-1088P-201ENST00000516850 ASAH2Q9NR71 780 aa2.65□□□□□ -1.99
RNU6-1088P-201ENST00000516850 ZDHHC18Q9NUE0 388 aa2.65□□□□□ -1.99
RNU6-1088P-201ENST00000516850 ADPRHL2Q9NX46 363 aa2.65□□□□□ -1.99
RNU6-1088P-201ENST00000516850 CCDC196A0A1B0GTZ2 297 aa2.64□□□□□ -1.99
RNU6-1088P-201ENST00000516850 A0A1B0GVY2 172 aa2.64□□□□□ -1.99
RNU6-1088P-201ENST00000516850 OR5K3A6NET4 321 aa2.64□□□□□ -1.99
RNU6-1088P-201ENST00000516850 H0YIN7 160 aa2.64□□□□□ -1.99
RNU6-1088P-201ENST00000516850 M0QZ24 198 aa2.64□□□□□ -1.99
RNU6-1088P-201ENST00000516850 SNAP23O00161 211 aa2.64□□□□□ -1.99
RNU6-1088P-201ENST00000516850 ANKRD28O15084 1053 aa2.64□□□□□ -1.99
RNU6-1088P-201ENST00000516850 ARHGEF9O43307 516 aa2.64□□□□□ -1.99
RNU6-1088P-201ENST00000516850 BAG4O95429 457 aaKnown RBP2.64□□□□□ -1.99
RNU6-1088P-201ENST00000516850 NR3C1P04150 777 aa2.64□□□□□ -1.99
RNU6-1088P-201ENST00000516850 ERVK-10P10266 1014 aa2.64□□□□□ -1.99
RNU6-1088P-201ENST00000516850 HSD3B1P14060 373 aa2.64□□□□□ -1.99
RNU6-1088P-201ENST00000516850 ZNF10P21506 573 aaPredicted RBP2.64□□□□□ -1.99
RNU6-1088P-201ENST00000516850 HOXC8P31273 242 aa2.64□□□□□ -1.99
RNU6-1088P-201ENST00000516850 ABCD1P33897 745 aa2.64□□□□□ -1.99
RNU6-1088P-201ENST00000516850 CLDN20P56880 219 aa2.64□□□□□ -1.99
RNU6-1088P-201ENST00000516850 VAMP2P63027 116 aa2.64□□□□□ -1.99
RNU6-1088P-201ENST00000516850 KCNJ10P78508 379 aa2.64□□□□□ -1.99
RNU6-1088P-201ENST00000516850 PDE1CQ14123 709 aaPredicted RBP2.64□□□□□ -1.99
RNU6-1088P-201ENST00000516850 HIST2H2BDQ6DRA6 164 aa2.64□□□□□ -1.99
RNU6-1088P-201ENST00000516850 KRTAP5-1Q6L8H4 278 aa2.64□□□□□ -1.99
RNU6-1088P-201ENST00000516850 RAD9BQ6WBX8 426 aa2.64□□□□□ -1.99
RNU6-1088P-201ENST00000516850 DPPA4Q7L190 304 aa2.64□□□□□ -1.99
RNU6-1088P-201ENST00000516850 APLFQ8IW19 511 aaPredicted RBP2.64□□□□□ -1.99
RNU6-1088P-201ENST00000516850 PAF1Q8N7H5 531 aa2.64□□□□□ -1.99
RNU6-1088P-201ENST00000516850 DDHD1Q8NEL9 900 aa2.64□□□□□ -1.99
RNU6-1088P-201ENST00000516850 ACVR1CQ8NER5 493 aa2.64□□□□□ -1.99
RNU6-1088P-201ENST00000516850 UTP15Q8TED0 518 aaKnown RBP2.64□□□□□ -1.99
RNU6-1088P-201ENST00000516850 RHBDF1Q96CC6 855 aa2.64□□□□□ -1.99
RNU6-1088P-201ENST00000516850 HVCN1Q96D96 273 aa2.64□□□□□ -1.99
RNU6-1088P-201ENST00000516850 ZBTB10Q96DT7 871 aa2.64□□□□□ -1.99
RNU6-1088P-201ENST00000516850 ACOX2Q99424 681 aa2.64□□□□□ -1.99
RNU6-1088P-201ENST00000516850 PYGO2Q9BRQ0 406 aa2.64□□□□□ -1.99
RNU6-1088P-201ENST00000516850 GLIS2Q9BZE0 524 aaPredicted RBP2.64□□□□□ -1.99
RNU6-1088P-201ENST00000516850 RAD21L1Q9H4I0 556 aa2.64□□□□□ -1.99
RNU6-1088P-201ENST00000516850 ZBTB20Q9HC78 741 aaPredicted RBP2.64□□□□□ -1.99
RNU6-1088P-201ENST00000516850 OR14J1Q9UGF5 321 aa2.64□□□□□ -1.99
RNU6-1088P-201ENST00000516850 RNF215Q9Y6U7 377 aa2.64□□□□□ -1.99
RNU6-1088P-201ENST00000516850 A0A1W2PPI3 338 aa2.63□□□□□ -1.99
RNU6-1088P-201ENST00000516850 DUXAA6NLW8 204 aa2.63□□□□□ -1.99
RNU6-1088P-201ENST00000516850 C15orf62A8K5M9 175 aa2.63□□□□□ -1.99
RNU6-1088P-201ENST00000516850 SEC31AO94979 1220 aaKnown RBP2.63□□□□□ -1.99
RNU6-1088P-201ENST00000516850 HNRNPA1P09651 372 aaKnown RBP eCLIP2.63□□□□□ -1.99
RNU6-1088P-201ENST00000516850 PLA2G4BP0C869 781 aa2.63□□□□□ -1.99
RNU6-1088P-201ENST00000516850 GNB3P16520 340 aa2.63□□□□□ -1.99
RNU6-1088P-201ENST00000516850 GNAZP19086 355 aa2.63□□□□□ -1.99
RNU6-1088P-201ENST00000516850 UBA1P22314 1058 aaKnown RBP2.63□□□□□ -1.99
RNU6-1088P-201ENST00000516850 UBA7P41226 1012 aa2.63□□□□□ -1.99
RNU6-1088P-201ENST00000516850 NOVP48745 357 aa2.63□□□□□ -1.99
RNU6-1088P-201ENST00000516850 EIF3BP55884 814 aaKnown RBP2.63□□□□□ -1.99
RNU6-1088P-201ENST00000516850 GALNT2Q10471 571 aa2.63□□□□□ -1.99
RNU6-1088P-201ENST00000516850 OLIG2Q13516 323 aa2.63□□□□□ -1.99
RNU6-1088P-201ENST00000516850 KIR2DS3Q14952 304 aa2.63□□□□□ -1.99
RNU6-1088P-201ENST00000516850 ZFP69Q49AA0 526 aa2.63□□□□□ -1.99
RNU6-1088P-201ENST00000516850 ZC2HC1CQ53FD0 456 aaPredicted RBP2.63□□□□□ -1.99
RNU6-1088P-201ENST00000516850 FAM69AQ5T7M9 428 aa2.63□□□□□ -1.99
RNU6-1088P-201ENST00000516850 PIWIL4Q7Z3Z4 852 aaKnown RBP2.63□□□□□ -1.99
RNU6-1088P-201ENST00000516850 LONP2Q86WA8 852 aa2.63□□□□□ -1.99
RNU6-1088P-201ENST00000516850 NRROSQ86YC3 692 aa2.63□□□□□ -1.99
RNU6-1088P-201ENST00000516850 ANKRD42Q8N9B4 389 aa2.63□□□□□ -1.99
RNU6-1088P-201ENST00000516850 MAPK1IP1LQ8NDC0 245 aa2.63□□□□□ -1.99
RNU6-1088P-201ENST00000516850 TRIM58Q8NG06 486 aa2.63□□□□□ -1.99
RNU6-1088P-201ENST00000516850 SLC44A1Q8WWI5 657 aa2.63□□□□□ -1.99
RNU6-1088P-201ENST00000516850 FCAMRQ8WWV6 532 aa2.63□□□□□ -1.99
RNU6-1088P-201ENST00000516850 GTF3C6Q969F1 213 aa2.63□□□□□ -1.99
RNU6-1088P-201ENST00000516850 GCC1Q96CN9 775 aa2.63□□□□□ -1.99
RNU6-1088P-201ENST00000516850 OXNAD1Q96HP4 312 aaPredicted RBP2.63□□□□□ -1.99
RNU6-1088P-201ENST00000516850 SCLT1Q96NL6 688 aa2.63□□□□□ -1.99
RNU6-1088P-201ENST00000516850 OPRPNQ99935 248 aaPredicted RBP2.63□□□□□ -1.99
RNU6-1088P-201ENST00000516850 TRIM51Q9BSJ1 452 aa2.63□□□□□ -1.99
RNU6-1088P-201ENST00000516850 PDZD7Q9H5P4 517 aa2.63□□□□□ -1.99
RNU6-1088P-201ENST00000516850 TRPC7Q9HCX4 862 aa2.63□□□□□ -1.99
RNU6-1088P-201ENST00000516850 LTB4R2Q9NPC1 389 aa2.63□□□□□ -1.99
RNU6-1088P-201ENST00000516850 ECHDC1Q9NTX5 307 aa2.63□□□□□ -1.99
RNU6-1088P-201ENST00000516850 SARDHQ9UL12 918 aa2.63□□□□□ -1.99
RNU6-1088P-201ENST00000516850 PADI3Q9ULW8 664 aa2.63□□□□□ -1.99
RNU6-1088P-201ENST00000516850 GPR52Q9Y2T5 361 aa2.63□□□□□ -1.99
RNU6-1088P-201ENST00000516850 KIAA1210Q9ULL0 1709 aa2.62□□□□□ -1.99
RNU6-1088P-201ENST00000516850 A0A0J9YWU9 116 aa2.62□□□□□ -1.99
RNU6-1088P-201ENST00000516850 FAM237AA0A1B0GTK4 181 aa2.62□□□□□ -1.99
RNU6-1088P-201ENST00000516850 NDUFAF8A1L188 74 aa2.62□□□□□ -1.99
RNU6-1088P-201ENST00000516850 A6NL46 340 aa2.62□□□□□ -1.99
RNU6-1088P-201ENST00000516850 FAM90A26D6RGX4 464 aa2.62□□□□□ -1.99
RNU6-1088P-201ENST00000516850 KRT19P08727 400 aa2.62□□□□□ -1.99
RNU6-1088P-201ENST00000516850 IL7RP16871 459 aa2.62□□□□□ -1.99
RNU6-1088P-201ENST00000516850 ZNF26P17031 533 aaPredicted RBP2.62□□□□□ -1.99
RNU6-1088P-201ENST00000516850 UGT1A1P22309 533 aa2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms