RNA–Protein interactions for RNA: ENST00000514271.2

CLIP1-205, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 3,493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-205ENST00000514271 MATN4O95460 622 aa7.38□□□□□ -1.23
CLIP1-205ENST00000514271 MPOP05164 745 aa7.38□□□□□ -1.23
CLIP1-205ENST00000514271 C8AP07357 584 aa7.38□□□□□ -1.23
CLIP1-205ENST00000514271 EPB42P16452 691 aa7.38□□□□□ -1.23
CLIP1-205ENST00000514271 TFE3P19532 575 aaPredicted RBP7.38□□□□□ -1.23
CLIP1-205ENST00000514271 RPL10P27635 214 aaKnown RBP7.38□□□□□ -1.23
CLIP1-205ENST00000514271 CA8P35219 290 aa7.38□□□□□ -1.23
CLIP1-205ENST00000514271 CDKN1CP49918 316 aaPredicted RBP7.38□□□□□ -1.23
CLIP1-205ENST00000514271 SCAPQ12770 1279 aa7.38□□□□□ -1.23
CLIP1-205ENST00000514271 MTX3Q5HYI7 312 aa7.38□□□□□ -1.23
CLIP1-205ENST00000514271 CYP4A22Q5TCH4 519 aa7.38□□□□□ -1.23
CLIP1-205ENST00000514271 KDM4DQ6B0I6 523 aa7.38□□□□□ -1.23
CLIP1-205ENST00000514271 DENND5AQ6IQ26 1287 aa7.38□□□□□ -1.23
CLIP1-205ENST00000514271 CFAP161Q6P656 301 aa7.38□□□□□ -1.23
CLIP1-205ENST00000514271 RNF165Q6ZSG1 346 aa7.38□□□□□ -1.23
CLIP1-205ENST00000514271 SETD3Q86TU7 594 aaPredicted RBP7.38□□□□□ -1.23
CLIP1-205ENST00000514271 IGFN1Q86VF2 1251 aa7.38□□□□□ -1.23
CLIP1-205ENST00000514271 GALNT13Q8IUC8 556 aa7.38□□□□□ -1.23
CLIP1-205ENST00000514271 DCLK2Q8N568 766 aa7.38□□□□□ -1.23
CLIP1-205ENST00000514271 SLC15A4Q8N697 577 aa7.38□□□□□ -1.23
CLIP1-205ENST00000514271 PSMG2Q969U7 264 aa7.38□□□□□ -1.23
CLIP1-205ENST00000514271 L3HYPDHQ96EM0 354 aa7.38□□□□□ -1.23
CLIP1-205ENST00000514271 RNF170Q96K19 258 aa7.38□□□□□ -1.23
CLIP1-205ENST00000514271 S1PR5Q9H228 398 aa7.38□□□□□ -1.23
CLIP1-205ENST00000514271 TRPV4Q9HBA0 871 aa7.38□□□□□ -1.23
CLIP1-205ENST00000514271 ZNF358Q9NW07 568 aa7.38□□□□□ -1.23
CLIP1-205ENST00000514271 VTI1BQ9UEU0 232 aa7.38□□□□□ -1.23
CLIP1-205ENST00000514271 HELZP42694 1942 aaKnown RBP7.38□□□□□ -1.23
CLIP1-205ENST00000514271 DENND4CQ5VZ89 1909 aa7.38□□□□□ -1.23
CLIP1-205ENST00000514271 FAM92AA1XBS5 289 aa7.38□□□□□ -1.23
CLIP1-205ENST00000514271 E7ENX8 843 aa7.38□□□□□ -1.23
CLIP1-205ENST00000514271 STX16-NPEPL1H3BU86 382 aa7.38□□□□□ -1.23
CLIP1-205ENST00000514271 HDAC3O15379 428 aa7.38□□□□□ -1.23
CLIP1-205ENST00000514271 DCXO43602 365 aa7.38□□□□□ -1.23
CLIP1-205ENST00000514271 GALR2O43603 387 aaPredicted RBP7.38□□□□□ -1.23
CLIP1-205ENST00000514271 UGT2B11O75310 529 aa7.38□□□□□ -1.23
CLIP1-205ENST00000514271 CHRNGP07510 517 aa7.38□□□□□ -1.23
CLIP1-205ENST00000514271 MBL2P11226 248 aaPredicted RBP7.38□□□□□ -1.23
CLIP1-205ENST00000514271 GABARAPL2P60520 117 aa7.38□□□□□ -1.23
CLIP1-205ENST00000514271 BST2Q10589 180 aaKnown RBP7.38□□□□□ -1.23
CLIP1-205ENST00000514271 KCNT1Q5JUK3 1230 aa7.38□□□□□ -1.23
CLIP1-205ENST00000514271 FSTL4Q6MZW2 842 aa7.38□□□□□ -1.23
CLIP1-205ENST00000514271 SLC2A7Q6PXP3 512 aa7.38□□□□□ -1.23
CLIP1-205ENST00000514271 ANKRD52Q8NB46 1076 aa7.38□□□□□ -1.23
CLIP1-205ENST00000514271 TMEM35BQ8NCS4 154 aa7.38□□□□□ -1.23
CLIP1-205ENST00000514271 SLC26A7Q8TE54 656 aa7.38□□□□□ -1.23
CLIP1-205ENST00000514271 ATP6V1E2Q96A05 226 aa7.38□□□□□ -1.23
CLIP1-205ENST00000514271 MBOAT4Q96T53 435 aa7.38□□□□□ -1.23
CLIP1-205ENST00000514271 RTP3Q9BQQ7 232 aa7.38□□□□□ -1.23
CLIP1-205ENST00000514271 MLPHQ9BV36 600 aaPredicted RBP7.38□□□□□ -1.23
CLIP1-205ENST00000514271 KIFC1Q9BW19 673 aa7.38□□□□□ -1.23
CLIP1-205ENST00000514271 PHF7Q9BWX1 381 aaPredicted RBP7.38□□□□□ -1.23
CLIP1-205ENST00000514271 C1QTNF3Q9BXJ4 246 aa7.38□□□□□ -1.23
CLIP1-205ENST00000514271 LRRC4Q9HBW1 653 aa7.38□□□□□ -1.23
CLIP1-205ENST00000514271 ASAH2Q9NR71 780 aa7.38□□□□□ -1.23
CLIP1-205ENST00000514271 TREX1Q9NSU2 369 aa7.38□□□□□ -1.23
CLIP1-205ENST00000514271 OLA1Q9NTK5 396 aaKnown RBP7.38□□□□□ -1.23
CLIP1-205ENST00000514271 NXF1Q9UBU9 619 aaKnown RBP7.38□□□□□ -1.23
CLIP1-205ENST00000514271 SNX5Q9Y5X3 404 aa7.38□□□□□ -1.23
CLIP1-205ENST00000514271 AUP1Q9Y679 476 aa7.38□□□□□ -1.23
CLIP1-205ENST00000514271 KRBA1A5PL33 1030 aa7.37□□□□□ -1.23
CLIP1-205ENST00000514271 AQP12BA6NM10 295 aa7.37□□□□□ -1.23
CLIP1-205ENST00000514271 PSMD12O00232 456 aaPredicted RBP7.37□□□□□ -1.23
CLIP1-205ENST00000514271 XPO1O14980 1071 aaKnown RBP7.37□□□□□ -1.23
CLIP1-205ENST00000514271 SEC14L5O43304 696 aa7.37□□□□□ -1.23
CLIP1-205ENST00000514271 MBTPS2O43462 519 aa7.37□□□□□ -1.23
CLIP1-205ENST00000514271 ALDOCP09972 364 aaKnown RBP7.37□□□□□ -1.23
CLIP1-205ENST00000514271 TTKP33981 857 aa7.37□□□□□ -1.23
CLIP1-205ENST00000514271 IRS1P35568 1242 aa7.37□□□□□ -1.23
CLIP1-205ENST00000514271 PXNP49023 591 aaPredicted RBP7.37□□□□□ -1.23
CLIP1-205ENST00000514271 SUOXP51687 545 aa7.37□□□□□ -1.23
CLIP1-205ENST00000514271 KPNA1P52294 538 aaPredicted RBP7.37□□□□□ -1.23
CLIP1-205ENST00000514271 KIAA0040Q15053 153 aa7.37□□□□□ -1.23
CLIP1-205ENST00000514271 SPANXN3Q5MJ09 141 aa7.37□□□□□ -1.23
CLIP1-205ENST00000514271 RARS2Q5T160 578 aaKnown RBP7.37□□□□□ -1.23
CLIP1-205ENST00000514271 TMEM164Q5U3C3 297 aa7.37□□□□□ -1.23
CLIP1-205ENST00000514271 DNAJC24Q6P3W2 148 aa7.37□□□□□ -1.23
CLIP1-205ENST00000514271 OSTM1Q86WC4 334 aa7.37□□□□□ -1.23
CLIP1-205ENST00000514271 AQP12AQ8IXF9 295 aa7.37□□□□□ -1.23
CLIP1-205ENST00000514271 TERB1Q8NA31 727 aa7.37□□□□□ -1.23
CLIP1-205ENST00000514271 PIK3C3Q8NEB9 887 aa7.37□□□□□ -1.23
CLIP1-205ENST00000514271 LRTOMTQ8WZ04 291 aa7.37□□□□□ -1.23
CLIP1-205ENST00000514271 MYLPFQ96A32 169 aa7.37□□□□□ -1.23
CLIP1-205ENST00000514271 TXNDC15Q96J42 360 aa7.37□□□□□ -1.23
CLIP1-205ENST00000514271 FRMD6Q96NE9 622 aa7.37□□□□□ -1.23
CLIP1-205ENST00000514271 HEPHQ9BQS7 1158 aa7.37□□□□□ -1.23
CLIP1-205ENST00000514271 DUSP16Q9BY84 665 aa7.37□□□□□ -1.23
CLIP1-205ENST00000514271 ALOXE3Q9BYJ1 711 aa7.37□□□□□ -1.23
CLIP1-205ENST00000514271 SEPT11Q9NVA2 429 aaKnown RBP7.37□□□□□ -1.23
CLIP1-205ENST00000514271 FKBP14Q9NWM8 211 aa7.37□□□□□ -1.23
CLIP1-205ENST00000514271 KCTD5Q9NXV2 234 aa7.37□□□□□ -1.23
CLIP1-205ENST00000514271 CLDND1Q9NY35 253 aa7.37□□□□□ -1.23
CLIP1-205ENST00000514271 MKL2Q9ULH7 1088 aa7.37□□□□□ -1.23
CLIP1-205ENST00000514271 ANKRD6Q9Y2G4 727 aa7.37□□□□□ -1.23
CLIP1-205ENST00000514271 TDRKHQ9Y2W6 561 aaKnown RBP7.37□□□□□ -1.23
CLIP1-205ENST00000514271 HIDE1A8MVS5 230 aa7.37□□□□□ -1.23
CLIP1-205ENST00000514271 PPEF2O14830 753 aa7.37□□□□□ -1.23
CLIP1-205ENST00000514271 INHBAP08476 426 aa7.37□□□□□ -1.23
CLIP1-205ENST00000514271 GSTT2P0CG29 244 aa7.37□□□□□ -1.23
CLIP1-205ENST00000514271 GSTT2BP0CG30 244 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms