RNA–Protein interactions for RNA: ENST00000512107.5

MATR3-238, Transcript of matrin 3, human

TSL 4

Gene MATR3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-238	ENST00000512107	NFATC2	Q13469	925 aa		14.42	□□□□□ -0.1
MATR3-238	ENST00000512107	HLTF	Q14527	1009 aa	Known RBP eCLIP	14.42	□□□□□ -0.1
MATR3-238	ENST00000512107	NFATC4	Q14934	902 aa		14.42	□□□□□ -0.1
MATR3-238	ENST00000512107	SKIDA1	Q1XH10	827 aa		14.42	□□□□□ -0.1
MATR3-238	ENST00000512107	ALG11	Q2TAA5	492 aa		14.42	□□□□□ -0.1
MATR3-238	ENST00000512107	ZRANB3	Q5FWF4	1079 aa		14.42	□□□□□ -0.1
MATR3-238	ENST00000512107	GPRC6A	Q5T6X5	926 aa		14.42	□□□□□ -0.1
MATR3-238	ENST00000512107	KIAA0930	Q6ICG6	404 aa	Predicted RBP	14.42	□□□□□ -0.1
MATR3-238	ENST00000512107	DOK6	Q6PKX4	331 aa		14.42	□□□□□ -0.1
MATR3-238	ENST00000512107	SERPINA9	Q86WD7	417 aa		14.42	□□□□□ -0.1
MATR3-238	ENST00000512107	IFT20	Q8IY31	132 aa		14.42	□□□□□ -0.1
MATR3-238	ENST00000512107	RBFA	Q8N0V3	343 aa		14.42	□□□□□ -0.1
MATR3-238	ENST00000512107	OR6P1	Q8NGX9	317 aa		14.42	□□□□□ -0.1
MATR3-238	ENST00000512107	DTX3L	Q8TDB6	740 aa		14.42	□□□□□ -0.1
MATR3-238	ENST00000512107	GLYATL1	Q969I3	302 aa		14.42	□□□□□ -0.1
MATR3-238	ENST00000512107	TSACC	Q96A04	125 aa	Predicted RBP	14.42	□□□□□ -0.1
MATR3-238	ENST00000512107	PDXP	Q96GD0	296 aa		14.42	□□□□□ -0.1
MATR3-238	ENST00000512107	HIC2	Q96JB3	615 aa		14.42	□□□□□ -0.1
MATR3-238	ENST00000512107	EPB41L4B	Q9H329	900 aa		14.42	□□□□□ -0.1
MATR3-238	ENST00000512107	LRRC4C	Q9HCJ2	640 aa		14.42	□□□□□ -0.1
MATR3-238	ENST00000512107	TM7SF3	Q9NS93	570 aa		14.42	□□□□□ -0.1
MATR3-238	ENST00000512107	NINJ2	Q9NZG7	142 aa		14.42	□□□□□ -0.1
MATR3-238	ENST00000512107	ATXN10	Q9UBB4	475 aa		14.42	□□□□□ -0.1
MATR3-238	ENST00000512107	ZC3H7B	Q9UGR2	993 aa	Known RBP	14.42	□□□□□ -0.1
MATR3-238	ENST00000512107	ANKRD6	Q9Y2G4	727 aa		14.42	□□□□□ -0.1
MATR3-238	ENST00000512107	PRKAB1	Q9Y478	270 aa		14.42	□□□□□ -0.1
MATR3-238	ENST00000512107	FRYL	O94915	3013 aa		14.42	□□□□□ -0.1
MATR3-238	ENST00000512107	AP3B1	O00203	1094 aa		14.41	□□□□□ -0.1
MATR3-238	ENST00000512107	EIF3H	O15372	352 aa	Known RBP eCLIP	14.41	□□□□□ -0.1
MATR3-238	ENST00000512107	OR1I1	O60431	355 aa		14.41	□□□□□ -0.1
MATR3-238	ENST00000512107	DNAJC6	O75061	913 aa		14.41	□□□□□ -0.1
MATR3-238	ENST00000512107	CFI	P05156	583 aa		14.41	□□□□□ -0.1
MATR3-238	ENST00000512107	ZNF8	P17098	575 aa	Predicted RBP	14.41	□□□□□ -0.1
MATR3-238	ENST00000512107	GABRB3	P28472	473 aa		14.41	□□□□□ -0.1
MATR3-238	ENST00000512107	TNFRSF8	P28908	595 aa		14.41	□□□□□ -0.1
MATR3-238	ENST00000512107	RABIF	P47224	123 aa		14.41	□□□□□ -0.1
MATR3-238	ENST00000512107	CTSC	P53634	463 aa		14.41	□□□□□ -0.1
MATR3-238	ENST00000512107	KIAA1024L	P59773	190 aa		14.41	□□□□□ -0.1
MATR3-238	ENST00000512107	MPP1	Q00013	466 aa		14.41	□□□□□ -0.1
MATR3-238	ENST00000512107	GRIK2	Q13002	908 aa		14.41	□□□□□ -0.1
MATR3-238	ENST00000512107	CUL1	Q13616	776 aa		14.41	□□□□□ -0.1
MATR3-238	ENST00000512107	EFTUD2	Q15029	972 aa	Known RBP eCLIP	14.41	□□□□□ -0.1	1e-9	■■■■■ 28.6
MATR3-238	ENST00000512107	TCEA2	Q15560	299 aa		14.41	□□□□□ -0.1
MATR3-238	ENST00000512107	DUOXA1	Q1HG43	343 aa		14.41	□□□□□ -0.1
MATR3-238	ENST00000512107	TRIM61	Q5EBN2	209 aa		14.41	□□□□□ -0.1
MATR3-238	ENST00000512107	ENPP7	Q6UWV6	458 aa		14.41	□□□□□ -0.1
MATR3-238	ENST00000512107	CENPU	Q71F23	418 aa		14.41	□□□□□ -0.1
MATR3-238	ENST00000512107	NLRP9	Q7RTR0	991 aa		14.41	□□□□□ -0.1
MATR3-238	ENST00000512107	SNX20	Q7Z614	316 aa		14.41	□□□□□ -0.1
MATR3-238	ENST00000512107	DENND6A	Q8IWF6	608 aa		14.41	□□□□□ -0.1
MATR3-238	ENST00000512107	NXPE1	Q8N323	547 aa		14.41	□□□□□ -0.1
MATR3-238	ENST00000512107	RASGEF1A	Q8N9B8	481 aa		14.41	□□□□□ -0.1
MATR3-238	ENST00000512107	OR4L1	Q8NH43	312 aa		14.41	□□□□□ -0.1
MATR3-238	ENST00000512107	VPS35	Q96QK1	796 aa		14.41	□□□□□ -0.1
MATR3-238	ENST00000512107	C19orf43	Q9BQ61	176 aa		14.41	□□□□□ -0.1
MATR3-238	ENST00000512107	ZSCAN5A	Q9BUG6	496 aa		14.41	□□□□□ -0.1
MATR3-238	ENST00000512107	C1QTNF7	Q9BXJ2	289 aa		14.41	□□□□□ -0.1
MATR3-238	ENST00000512107	PARD6B	Q9BYG5	372 aa		14.41	□□□□□ -0.1
MATR3-238	ENST00000512107	WDR26	Q9H7D7	661 aa		14.41	□□□□□ -0.1
MATR3-238	ENST00000512107	SMOX	Q9NWM0	555 aa		14.41	□□□□□ -0.1
MATR3-238	ENST00000512107	SAMD15	Q9P1V8	674 aa		14.41	□□□□□ -0.1
MATR3-238	ENST00000512107	LAMA1	P25391	3075 aa		14.41	□□□□□ -0.1
MATR3-238	ENST00000512107	OTOGL	Q3ZCN5	2332 aa		14.4	□□□□□ -0.1
MATR3-238	ENST00000512107	SPTY2D1-AS1	A0A0U1RR47	76 aa		14.4	□□□□□ -0.1
MATR3-238	ENST00000512107	MAGEB16	A2A368	324 aa		14.4	□□□□□ -0.1
MATR3-238	ENST00000512107	LMNA	P02545	664 aa	Known RBP	14.4	□□□□□ -0.1
MATR3-238	ENST00000512107	RET	P07949	1114 aa		14.4	□□□□□ -0.1
MATR3-238	ENST00000512107	HOXC4	P09017	264 aa	Predicted RBP	14.4	□□□□□ -0.1
MATR3-238	ENST00000512107	MYCLP1	P12525	358 aa	Predicted RBP	14.4	□□□□□ -0.1
MATR3-238	ENST00000512107	ACRV1	P26436	265 aa		14.4	□□□□□ -0.1
MATR3-238	ENST00000512107	HADHA	P40939	763 aa		14.4	□□□□□ -0.1
MATR3-238	ENST00000512107	ABCG1	P45844	678 aa		14.4	□□□□□ -0.1
MATR3-238	ENST00000512107	AFF3	P51826	1226 aa	Known RBP	14.4	□□□□□ -0.1
MATR3-238	ENST00000512107	PDE1B	Q01064	536 aa		14.4	□□□□□ -0.1
MATR3-238	ENST00000512107	IL9R	Q01113	521 aa		14.4	□□□□□ -0.1
MATR3-238	ENST00000512107	CACNG1	Q06432	222 aa		14.4	□□□□□ -0.1
MATR3-238	ENST00000512107	CTBP1	Q13363	440 aa		14.4	□□□□□ -0.1
MATR3-238	ENST00000512107	KYNU	Q16719	465 aa		14.4	□□□□□ -0.1
MATR3-238	ENST00000512107	SPANXN3	Q5MJ09	141 aa		14.4	□□□□□ -0.1
MATR3-238	ENST00000512107	SLC23A3	Q6PIS1	610 aa		14.4	□□□□□ -0.1
MATR3-238	ENST00000512107	AFTPH	Q6ULP2	937 aa		14.4	□□□□□ -0.1
MATR3-238	ENST00000512107	MARK2	Q7KZI7	788 aa	Known RBP	14.4	□□□□□ -0.1
MATR3-238	ENST00000512107	TAS2R42	Q7RTR8	314 aa		14.4	□□□□□ -0.1
MATR3-238	ENST00000512107	ZNF547	Q8IVP9	402 aa		14.4	□□□□□ -0.1
MATR3-238	ENST00000512107	SERBP1	Q8NC51	408 aa	Known RBP eCLIP	14.4	□□□□□ -0.1	8e-81	■■□□□ 11.7
MATR3-238	ENST00000512107	DDHD1	Q8NEL9	900 aa		14.4	□□□□□ -0.1
MATR3-238	ENST00000512107	CCL4L1	Q8NHW4	92 aa		14.4	□□□□□ -0.1
MATR3-238	ENST00000512107	LKAAEAR1	Q8TD35	194 aa		14.4	□□□□□ -0.1
MATR3-238	ENST00000512107	PEX13	Q92968	403 aa		14.4	□□□□□ -0.1
MATR3-238	ENST00000512107	LRRC39	Q96DD0	335 aa		14.4	□□□□□ -0.1
MATR3-238	ENST00000512107	FMO2	Q99518	471 aa		14.4	□□□□□ -0.1
MATR3-238	ENST00000512107	OR2AG1	Q9H205	316 aa		14.4	□□□□□ -0.1
MATR3-238	ENST00000512107	CDC42EP4	Q9H3Q1	356 aa	Known RBP	14.4	□□□□□ -0.1
MATR3-238	ENST00000512107	RAD18	Q9NS91	495 aa		14.4	□□□□□ -0.1
MATR3-238	ENST00000512107	IARS2	Q9NSE4	1012 aa	Known RBP	14.4	□□□□□ -0.1
MATR3-238	ENST00000512107	MOCS1	Q9NZB8	636 aa		14.4	□□□□□ -0.1
MATR3-238	ENST00000512107	RAB23	Q9ULC3	237 aa		14.4	□□□□□ -0.1
MATR3-238	ENST00000512107	SLC17A4	Q9Y2C5	497 aa		14.4	□□□□□ -0.1
MATR3-238	ENST00000512107	PCDHGA5	Q9Y5G8	931 aa		14.4	□□□□□ -0.1
MATR3-238	ENST00000512107	CACNA1E	Q15878	2313 aa		14.4	□□□□□ -0.11

Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms