RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 A6NLC8 198 aa3.73□□□□□ -1.81
TOPBP1-208ENST00000511439 A6NNC1 897 aa3.73□□□□□ -1.81
TOPBP1-208ENST00000511439 H3BNX3 289 aa3.73□□□□□ -1.81
TOPBP1-208ENST00000511439 J3KRW8 73 aa3.73□□□□□ -1.81
TOPBP1-208ENST00000511439 SLC28A2O43868 658 aa3.73□□□□□ -1.81
TOPBP1-208ENST00000511439 HBP1O60381 514 aa3.73□□□□□ -1.81
TOPBP1-208ENST00000511439 GUCY1B2O75343 617 aa3.73□□□□□ -1.81
TOPBP1-208ENST00000511439 ALPLP05186 524 aa3.73□□□□□ -1.81
TOPBP1-208ENST00000511439 CHRM4P08173 479 aa3.73□□□□□ -1.81
TOPBP1-208ENST00000511439 MMP3P08254 477 aa3.73□□□□□ -1.81
TOPBP1-208ENST00000511439 HNRNPA1P09651 372 aaKnown RBP eCLIP3.73□□□□□ -1.81
TOPBP1-208ENST00000511439 CHRNB1P11230 501 aa3.73□□□□□ -1.81
TOPBP1-208ENST00000511439 GLULP15104 373 aa3.73□□□□□ -1.81
TOPBP1-208ENST00000511439 RDXP35241 583 aaKnown RBP3.73□□□□□ -1.81
TOPBP1-208ENST00000511439 COPB2P35606 906 aa3.73□□□□□ -1.81
TOPBP1-208ENST00000511439 SKIV2L2P42285 1042 aaKnown RBP3.73□□□□□ -1.81
TOPBP1-208ENST00000511439 PTPN9P43378 593 aa3.73□□□□□ -1.81
TOPBP1-208ENST00000511439 NR1H2P55055 460 aa3.73□□□□□ -1.81
TOPBP1-208ENST00000511439 G3BP1Q13283 466 aaKnown RBP eCLIP3.73□□□□□ -1.81
TOPBP1-208ENST00000511439 CAMK1Q14012 370 aa3.73□□□□□ -1.81
TOPBP1-208ENST00000511439 SIM2Q14190 667 aaPredicted RBP3.73□□□□□ -1.81
TOPBP1-208ENST00000511439 NONOQ15233 471 aaKnown RBP eCLIP3.73□□□□□ -1.81
TOPBP1-208ENST00000511439 INPP5JQ15735 1006 aaPredicted RBP3.73□□□□□ -1.81
TOPBP1-208ENST00000511439 RPE65Q16518 533 aa3.73□□□□□ -1.81
TOPBP1-208ENST00000511439 SLC18A3Q16572 532 aa3.73□□□□□ -1.81
TOPBP1-208ENST00000511439 BAK1Q16611 211 aa3.73□□□□□ -1.81
TOPBP1-208ENST00000511439 SYTL3Q4VX76 610 aa3.73□□□□□ -1.81
TOPBP1-208ENST00000511439 SLC9C2Q5TAH2 1124 aa3.73□□□□□ -1.81
TOPBP1-208ENST00000511439 DAB2IPQ5VWQ8 1189 aa3.73□□□□□ -1.81
TOPBP1-208ENST00000511439 NAA35Q5VZE5 725 aa3.73□□□□□ -1.81
TOPBP1-208ENST00000511439 TMEM268Q5VZI3 342 aa3.73□□□□□ -1.81
TOPBP1-208ENST00000511439 TMEM184AQ6ZMB5 413 aa3.73□□□□□ -1.81
TOPBP1-208ENST00000511439 B4GALNT4Q76KP1 1039 aa3.73□□□□□ -1.81
TOPBP1-208ENST00000511439 WDR5BQ86VZ2 330 aa3.73□□□□□ -1.81
TOPBP1-208ENST00000511439 HEATR4Q86WZ0 1026 aa3.73□□□□□ -1.81
TOPBP1-208ENST00000511439 SLC25A41Q8N5S1 370 aa3.73□□□□□ -1.81
TOPBP1-208ENST00000511439 TSPYL6Q8N831 410 aa3.73□□□□□ -1.81
TOPBP1-208ENST00000511439 CMASQ8NFW8 434 aaPredicted RBP3.73□□□□□ -1.81
TOPBP1-208ENST00000511439 VN1R2Q8NFZ6 395 aa3.73□□□□□ -1.81
TOPBP1-208ENST00000511439 RFWD2Q8NHY2 731 aa3.73□□□□□ -1.81
TOPBP1-208ENST00000511439 CENPIQ92674 756 aaPredicted RBP3.73□□□□□ -1.81
TOPBP1-208ENST00000511439 P2RX5Q93086 422 aa3.73□□□□□ -1.81
TOPBP1-208ENST00000511439 ZBTB10Q96DT7 871 aa3.73□□□□□ -1.81
TOPBP1-208ENST00000511439 ZNF419Q96HQ0 510 aaPredicted RBP3.73□□□□□ -1.81
TOPBP1-208ENST00000511439 TEFMQ96QE5 360 aaKnown RBP3.73□□□□□ -1.81
TOPBP1-208ENST00000511439 CD180Q99467 661 aa3.73□□□□□ -1.81
TOPBP1-208ENST00000511439 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.73□□□□□ -1.81
TOPBP1-208ENST00000511439 RPAP3Q9H6T3 665 aaPredicted RBP3.73□□□□□ -1.81
TOPBP1-208ENST00000511439 JMJD4Q9H9V9 463 aa3.73□□□□□ -1.81
TOPBP1-208ENST00000511439 PNRC2Q9NPJ4 139 aaKnown RBP3.73□□□□□ -1.81
TOPBP1-208ENST00000511439 ALKBH4Q9NXW9 302 aa3.73□□□□□ -1.81
TOPBP1-208ENST00000511439 HOXC10Q9NYD6 342 aa3.73□□□□□ -1.81
TOPBP1-208ENST00000511439 GRHL1Q9NZI5 618 aa3.73□□□□□ -1.81
TOPBP1-208ENST00000511439 NLKQ9UBE8 527 aa3.73□□□□□ -1.81
TOPBP1-208ENST00000511439 FBXO40Q9UH90 709 aa3.73□□□□□ -1.81
TOPBP1-208ENST00000511439 TBX20Q9UMR3 447 aa3.73□□□□□ -1.81
TOPBP1-208ENST00000511439 DHDHQ9UQ10 334 aa3.73□□□□□ -1.81
TOPBP1-208ENST00000511439 SQORQ9Y6N5 450 aa3.73□□□□□ -1.81
TOPBP1-208ENST00000511439 NOTCH2Q04721 2471 aa3.73□□□□□ -1.81
TOPBP1-208ENST00000511439 ADGRA3Q8IWK6 1321 aa3.72□□□□□ -1.81
TOPBP1-208ENST00000511439 H0Y626 953 aa3.72□□□□□ -1.81
TOPBP1-208ENST00000511439 PER2O15055 1255 aa3.72□□□□□ -1.81
TOPBP1-208ENST00000511439 SH3BP5O60239 455 aa3.72□□□□□ -1.81
TOPBP1-208ENST00000511439 TMCC1O94876 653 aa3.72□□□□□ -1.81
TOPBP1-208ENST00000511439 TRIM16O95361 564 aa3.72□□□□□ -1.81
TOPBP1-208ENST00000511439 CBX6O95503 412 aa3.72□□□□□ -1.81
TOPBP1-208ENST00000511439 CRYABP02511 175 aaKnown RBP3.72□□□□□ -1.81
TOPBP1-208ENST00000511439 FGF2P09038 288 aa3.72□□□□□ -1.81
TOPBP1-208ENST00000511439 CD53P19397 219 aa3.72□□□□□ -1.81
TOPBP1-208ENST00000511439 CSRP1P21291 193 aaKnown RBP3.72□□□□□ -1.81
TOPBP1-208ENST00000511439 ELAVL4P26378 380 aaKnown RBP3.72□□□□□ -1.81
TOPBP1-208ENST00000511439 DDIT3P35638 169 aa3.72□□□□□ -1.81
TOPBP1-208ENST00000511439 LIFRP42702 1097 aa3.72□□□□□ -1.81
TOPBP1-208ENST00000511439 GPD2P43304 727 aa3.72□□□□□ -1.81
TOPBP1-208ENST00000511439 COG2Q14746 738 aa3.72□□□□□ -1.81
TOPBP1-208ENST00000511439 NAA25Q14CX7 972 aa3.72□□□□□ -1.81
TOPBP1-208ENST00000511439 SF3A2Q15428 464 aaKnown RBP3.72□□□□□ -1.81
TOPBP1-208ENST00000511439 NFIL3Q16649 462 aa3.72□□□□□ -1.81
TOPBP1-208ENST00000511439 DUSP6Q16828 381 aa3.72□□□□□ -1.81
TOPBP1-208ENST00000511439 TCTN1Q2MV58 587 aa3.72□□□□□ -1.81
TOPBP1-208ENST00000511439 FBXO43Q4G163 708 aa3.72□□□□□ -1.81
TOPBP1-208ENST00000511439 HMBOX1Q6NT76 420 aa3.72□□□□□ -1.81
TOPBP1-208ENST00000511439 ADGRG6Q86SQ4 1221 aa3.72□□□□□ -1.81
TOPBP1-208ENST00000511439 GPSM1Q86YR5 675 aa3.72□□□□□ -1.81
TOPBP1-208ENST00000511439 FAM185AQ8N0U4 392 aa3.72□□□□□ -1.81
TOPBP1-208ENST00000511439 TEX19Q8NA77 164 aa3.72□□□□□ -1.81
TOPBP1-208ENST00000511439 KDM1BQ8NB78 822 aa3.72□□□□□ -1.81
TOPBP1-208ENST00000511439 ZCCHC10Q8TBK6 192 aa3.72□□□□□ -1.81
TOPBP1-208ENST00000511439 RAB40AQ8WXH6 277 aa3.72□□□□□ -1.81
TOPBP1-208ENST00000511439 ST8SIA4Q92187 359 aa3.72□□□□□ -1.81
TOPBP1-208ENST00000511439 CNOT9Q92600 299 aaKnown RBP3.72□□□□□ -1.81
TOPBP1-208ENST00000511439 TOP1MTQ969P6 601 aa3.72□□□□□ -1.81
TOPBP1-208ENST00000511439 ELP4Q96EB1 424 aa3.72□□□□□ -1.81
TOPBP1-208ENST00000511439 RRP36Q96EU6 259 aaKnown RBP3.72□□□□□ -1.81
TOPBP1-208ENST00000511439 MPP4Q96JB8 637 aa3.72□□□□□ -1.81
TOPBP1-208ENST00000511439 KLHL5Q96PQ7 755 aa3.72□□□□□ -1.81
TOPBP1-208ENST00000511439 FUZQ9BT04 418 aa3.72□□□□□ -1.81
TOPBP1-208ENST00000511439 AGXT2Q9BYV1 514 aa3.72□□□□□ -1.81
TOPBP1-208ENST00000511439 IFIH1Q9BYX4 1025 aaKnown RBP3.72□□□□□ -1.81
TOPBP1-208ENST00000511439 MAF1Q9H063 256 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms