RNA–Protein interactions for RNA: ENST00000510626.5

HTT-208, Transcript of huntingtin, humanhuman

TSL 1 (best)

Gene HTT, Length 14,438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-208ENST00000510626 POMPQ9Y244 141 aa8.33□□□□□ -1.08
HTT-208ENST00000510626 PRODHO43272 600 aa8.33□□□□□ -1.08
HTT-208ENST00000510626 YBX3P16989 372 aaKnown RBP eCLIP8.33□□□□□ -1.082e-6■■■□□ 18.7
HTT-208ENST00000510626 GSTM3P21266 225 aa8.33□□□□□ -1.08
HTT-208ENST00000510626 LAPTM5Q13571 262 aa8.33□□□□□ -1.08
HTT-208ENST00000510626 KHDC1Q4VXA5 237 aaKnown RBP8.33□□□□□ -1.08
HTT-208ENST00000510626 TRUB1Q8WWH5 349 aaKnown RBP8.33□□□□□ -1.08
HTT-208ENST00000510626 ABI2Q9NYB9 513 aaPredicted RBP8.33□□□□□ -1.08
HTT-208ENST00000510626 DNAJB9Q9UBS3 223 aa8.33□□□□□ -1.08
HTT-208ENST00000510626 MALT1Q9UDY8 824 aa8.33□□□□□ -1.08
HTT-208ENST00000510626 CTPS1P17812 591 aa8.33□□□□□ -1.08
HTT-208ENST00000510626 SEMA3AQ14563 771 aa8.33□□□□□ -1.08
HTT-208ENST00000510626 ZNF467Q7Z7K2 595 aaPredicted RBP8.33□□□□□ -1.08
HTT-208ENST00000510626 ZNF317Q96PQ6 595 aaPredicted RBP8.33□□□□□ -1.08
HTT-208ENST00000510626 DERAQ9Y315 318 aa8.33□□□□□ -1.08
HTT-208ENST00000510626 RAP2AP10114 183 aa8.33□□□□□ -1.08
HTT-208ENST00000510626 PEX2P28328 305 aa8.33□□□□□ -1.08
HTT-208ENST00000510626 TRIM23P36406 574 aa8.33□□□□□ -1.08
HTT-208ENST00000510626 KIR3DL1P43629 444 aa8.33□□□□□ -1.08
HTT-208ENST00000510626 FNBP1LQ5T0N5 605 aa8.33□□□□□ -1.08
HTT-208ENST00000510626 CELF1Q92879 486 aaKnown RBP8.33□□□□□ -1.08
HTT-208ENST00000510626 PPCDCQ96CD2 204 aa8.33□□□□□ -1.08
HTT-208ENST00000510626 KCTD7Q96MP8 289 aa8.33□□□□□ -1.08
HTT-208ENST00000510626 CCDC115Q96NT0 180 aa8.33□□□□□ -1.08
HTT-208ENST00000510626 CHST7Q9NS84 486 aa8.33□□□□□ -1.08
HTT-208ENST00000510626 KCNE2Q9Y6J6 123 aa8.33□□□□□ -1.08
HTT-208ENST00000510626 A0A1W2PQ67 120 aa8.33□□□□□ -1.08
HTT-208ENST00000510626 CYP7B1O75881 506 aa8.33□□□□□ -1.08
HTT-208ENST00000510626 SMAD1Q15797 465 aaKnown RBP8.33□□□□□ -1.08
HTT-208ENST00000510626 HLA-DQA1Q5Y7H0 255 aa8.33□□□□□ -1.08
HTT-208ENST00000510626 GSTCDQ8NEC7 633 aa8.33□□□□□ -1.08
HTT-208ENST00000510626 MYO19Q96H55 970 aa8.33□□□□□ -1.08
HTT-208ENST00000510626 C2orf49Q9BVC5 232 aaPredicted RBP8.33□□□□□ -1.08
HTT-208ENST00000510626 SAV1Q9H4B6 383 aaPredicted RBP8.33□□□□□ -1.08
HTT-208ENST00000510626 KCNMB3Q9NPA1 279 aa8.33□□□□□ -1.08
HTT-208ENST00000510626 ENTPD6O75354 484 aa8.33□□□□□ -1.08
HTT-208ENST00000510626 DNAJB14Q8TBM8 379 aa8.33□□□□□ -1.08
HTT-208ENST00000510626 UROC1Q96N76 676 aa8.33□□□□□ -1.08
HTT-208ENST00000510626 CPXM1Q96SM3 734 aa8.33□□□□□ -1.08
HTT-208ENST00000510626 FAM53CQ9NYF3 392 aa8.33□□□□□ -1.08
HTT-208ENST00000510626 ZNF510Q9Y2H8 683 aa8.33□□□□□ -1.08
HTT-208ENST00000510626 SPATA31D1Q6ZQQ2 1576 aa8.33□□□□□ -1.08
HTT-208ENST00000510626 UROSP10746 265 aa8.32□□□□□ -1.08
HTT-208ENST00000510626 FGFR2P21802 821 aa8.32□□□□□ -1.08
HTT-208ENST00000510626 SCNN1BP51168 640 aa8.32□□□□□ -1.08
HTT-208ENST00000510626 SPOCK2Q92563 424 aa8.32□□□□□ -1.08
HTT-208ENST00000510626 TBCDQ9BTW9 1192 aa8.32□□□□□ -1.08
HTT-208ENST00000510626 SLA2Q9H6Q3 261 aa8.32□□□□□ -1.08
HTT-208ENST00000510626 XPR1Q9UBH6 696 aa8.32□□□□□ -1.08
HTT-208ENST00000510626 PNMA8BQ9ULN7 279 aaPredicted RBP8.32□□□□□ -1.08
HTT-208ENST00000510626 C9P02748 559 aa8.32□□□□□ -1.08
HTT-208ENST00000510626 PSMB4P28070 264 aa8.32□□□□□ -1.08
HTT-208ENST00000510626 CDH5P33151 784 aaPredicted RBP8.32□□□□□ -1.08
HTT-208ENST00000510626 ARCN1P48444 511 aaKnown RBP8.32□□□□□ -1.08
HTT-208ENST00000510626 AQP4P55087 323 aa8.32□□□□□ -1.08
HTT-208ENST00000510626 BIKQ13323 160 aa8.32□□□□□ -1.08
HTT-208ENST00000510626 FAM20CQ8IXL6 584 aa8.32□□□□□ -1.08
HTT-208ENST00000510626 C1GALT1C1Q96EU7 318 aa8.32□□□□□ -1.08
HTT-208ENST00000510626 CPNE2Q96FN4 548 aaPredicted RBP8.32□□□□□ -1.08
HTT-208ENST00000510626 DLG5Q8TDM6 1919 aa8.32□□□□□ -1.08
HTT-208ENST00000510626 WNT7AO00755 349 aa8.32□□□□□ -1.08
HTT-208ENST00000510626 TCF7P36402 384 aaPredicted RBP8.32□□□□□ -1.08
HTT-208ENST00000510626 IDH3AP50213 366 aa8.32□□□□□ -1.08
HTT-208ENST00000510626 VN1R5Q7Z5H4 357 aa8.32□□□□□ -1.08
HTT-208ENST00000510626 RBFAQ8N0V3 343 aa8.32□□□□□ -1.08
HTT-208ENST00000510626 CADM1Q9BY67 442 aaKnown RBP8.32□□□□□ -1.08
HTT-208ENST00000510626 RETREG1Q9H6L5 497 aa8.32□□□□□ -1.08
HTT-208ENST00000510626 BCAS2O75934 225 aaPredicted RBP8.32□□□□□ -1.08
HTT-208ENST00000510626 MAPK3P27361 379 aaPredicted RBP8.32□□□□□ -1.08
HTT-208ENST00000510626 TAS2R41P59536 307 aa8.32□□□□□ -1.08
HTT-208ENST00000510626 IRF8Q02556 426 aa8.32□□□□□ -1.08
HTT-208ENST00000510626 EIPR1Q53HC9 387 aa8.32□□□□□ -1.08
HTT-208ENST00000510626 IDNKQ5T6J7 187 aa8.32□□□□□ -1.08
HTT-208ENST00000510626 TMEM139Q8IV31 216 aa8.32□□□□□ -1.08
HTT-208ENST00000510626 UBR7Q8N806 425 aa8.32□□□□□ -1.08
HTT-208ENST00000510626 QPCTLQ9NXS2 382 aa8.32□□□□□ -1.08
HTT-208ENST00000510626 TRIM64CA6NLI5 447 aa8.32□□□□□ -1.08
HTT-208ENST00000510626 RP2O75695 350 aa8.32□□□□□ -1.08
HTT-208ENST00000510626 RSL1D1O76021 490 aaKnown RBP8.32□□□□□ -1.08
HTT-208ENST00000510626 TAS2R43P59537 309 aa8.32□□□□□ -1.08
HTT-208ENST00000510626 TBRG1Q3YBR2 411 aa8.32□□□□□ -1.08
HTT-208ENST00000510626 PLEKHN1Q494U1 663 aaPredicted RBP8.32□□□□□ -1.08
HTT-208ENST00000510626 AHSA2Q719I0 299 aa8.32□□□□□ -1.08
HTT-208ENST00000510626 SPATA9Q9BWV2 254 aa8.32□□□□□ -1.08
HTT-208ENST00000510626 MGAT5BQ3V5L5 792 aa8.32□□□□□ -1.08
HTT-208ENST00000510626 ASB13Q8WXK3 278 aa8.32□□□□□ -1.08
HTT-208ENST00000510626 C8orf48Q96LL4 319 aa8.32□□□□□ -1.08
HTT-208ENST00000510626 TDRD3Q9H7E2 651 aaKnown RBP8.32□□□□□ -1.08
HTT-208ENST00000510626 SPATA31A3Q5VYP0 1347 aa8.32□□□□□ -1.08
HTT-208ENST00000510626 ATRNO75882 1429 aa8.32□□□□□ -1.08
HTT-208ENST00000510626 CCNB2O95067 398 aa8.32□□□□□ -1.08
HTT-208ENST00000510626 OR6A2O95222 327 aa8.32□□□□□ -1.08
HTT-208ENST00000510626 ZIK1Q3SY52 487 aaPredicted RBP8.32□□□□□ -1.08
HTT-208ENST00000510626 OTOP1Q7RTM1 612 aa8.32□□□□□ -1.08
HTT-208ENST00000510626 SLC4A11Q8NBS3 891 aa8.32□□□□□ -1.08
HTT-208ENST00000510626 MED30Q96HR3 178 aa8.32□□□□□ -1.08
HTT-208ENST00000510626 HYLS1Q96M11 299 aa8.32□□□□□ -1.08
HTT-208ENST00000510626 RASSF1Q9NS23 344 aa8.32□□□□□ -1.08
HTT-208ENST00000510626 MIOSQ9NXC5 875 aa8.32□□□□□ -1.08
HTT-208ENST00000510626 ZIM2Q9NZV7 527 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms