RNA–Protein interactions for RNA: ENST00000509330.5

PHF3-209, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best) BASIC

Gene PHF3, Length 2,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-209ENST00000509330 IRF7Q92985 503 aa14.78□□□□□ -0.04
PHF3-209ENST00000509330 LRRC3BQ96PB8 259 aa14.78□□□□□ -0.04
PHF3-209ENST00000509330 ATOH8Q96SQ7 321 aa14.78□□□□□ -0.04
PHF3-209ENST00000509330 ZNF510Q9Y2H8 683 aa14.78□□□□□ -0.04
PHF3-209ENST00000509330 ANP32DO95626 131 aa14.78□□□□□ -0.04
PHF3-209ENST00000509330 HSPA1AP0DMV8 641 aaKnown RBP14.78□□□□□ -0.04
PHF3-209ENST00000509330 HSPA1BP0DMV9 641 aaKnown RBP14.78□□□□□ -0.04
PHF3-209ENST00000509330 PABPC1P11940 636 aaKnown RBP14.78□□□□□ -0.04
PHF3-209ENST00000509330 PRDX3P30048 256 aaKnown RBP14.78□□□□□ -0.04
PHF3-209ENST00000509330 DNAJB13P59910 316 aa14.78□□□□□ -0.04
PHF3-209ENST00000509330 NAA25Q14CX7 972 aa14.78□□□□□ -0.04
PHF3-209ENST00000509330 RCN1Q15293 331 aa14.78□□□□□ -0.04
PHF3-209ENST00000509330 CHRNA6Q15825 494 aa14.78□□□□□ -0.04
PHF3-209ENST00000509330 LRRC66Q68CR7 880 aa14.78□□□□□ -0.04
PHF3-209ENST00000509330 FBXO39Q8N4B4 442 aa14.78□□□□□ -0.04
PHF3-209ENST00000509330 CRLS1Q9UJA2 301 aa14.78□□□□□ -0.04
PHF3-209ENST00000509330 MRPS23Q9Y3D9 190 aaKnown RBP14.78□□□□□ -0.04
PHF3-209ENST00000509330 TRAF6Q9Y4K3 522 aa14.78□□□□□ -0.04
PHF3-209ENST00000509330 TIMM22Q9Y584 194 aa14.78□□□□□ -0.04
PHF3-209ENST00000509330 COPG1Q9Y678 874 aaKnown RBP14.78□□□□□ -0.04
PHF3-209ENST00000509330 CLASP2O75122 1294 aaKnown RBP14.77□□□□□ -0.04
PHF3-209ENST00000509330 MTX2O75431 263 aa14.77□□□□□ -0.04
PHF3-209ENST00000509330 GUCA1CO95843 209 aa14.77□□□□□ -0.04
PHF3-209ENST00000509330 CHRM1P11229 460 aaPredicted RBP14.77□□□□□ -0.04
PHF3-209ENST00000509330 SNRPD1P62314 119 aaKnown RBP14.77□□□□□ -0.04
PHF3-209ENST00000509330 HERVK_113P63132 956 aa14.77□□□□□ -0.04
PHF3-209ENST00000509330 C1orf146Q5VVC0 180 aa14.77□□□□□ -0.04
PHF3-209ENST00000509330 DET1Q7L5Y6 550 aa14.77□□□□□ -0.04
PHF3-209ENST00000509330 SLC22A9Q8IVM8 553 aa14.77□□□□□ -0.04
PHF3-209ENST00000509330 CMTM5Q96DZ9 223 aa14.77□□□□□ -0.04
PHF3-209ENST00000509330 C3orf30Q96M34 536 aa14.77□□□□□ -0.04
PHF3-209ENST00000509330 ERVK-6Q9BXR3 956 aa14.77□□□□□ -0.04
PHF3-209ENST00000509330 SYTL2Q9HCH5 934 aa14.77□□□□□ -0.04
PHF3-209ENST00000509330 MAGEE1Q9HCI5 957 aa14.77□□□□□ -0.04
PHF3-209ENST00000509330 SPHK2Q9NRA0 654 aa14.77□□□□□ -0.04
PHF3-209ENST00000509330 MAFFQ9ULX9 164 aa14.77□□□□□ -0.04
PHF3-209ENST00000509330 IRAK3Q9Y616 596 aa14.77□□□□□ -0.04
PHF3-209ENST00000509330 F8W8V4 182 aa14.77□□□□□ -0.05
PHF3-209ENST00000509330 GAPDHSO14556 408 aaPredicted RBP14.77□□□□□ -0.05
PHF3-209ENST00000509330 PYGLP06737 847 aa14.77□□□□□ -0.05
PHF3-209ENST00000509330 MESP2Q0VG99 397 aa14.77□□□□□ -0.05
PHF3-209ENST00000509330 MYLK3Q32MK0 819 aa14.77□□□□□ -0.05
PHF3-209ENST00000509330 GK5Q6ZS86 529 aa14.77□□□□□ -0.05
PHF3-209ENST00000509330 DDIASQ8IXT1 998 aa14.77□□□□□ -0.05
PHF3-209ENST00000509330 GPR26Q8NDV2 337 aa14.77□□□□□ -0.05
PHF3-209ENST00000509330 CCDC126Q96EE4 140 aa14.77□□□□□ -0.05
PHF3-209ENST00000509330 CDK15Q96Q40 435 aa14.77□□□□□ -0.05
PHF3-209ENST00000509330 RNPEPL1Q9HAU8 725 aa14.77□□□□□ -0.05
PHF3-209ENST00000509330 EML4Q9HC35 981 aaKnown RBP14.77□□□□□ -0.05
PHF3-209ENST00000509330 HACD3Q9P035 362 aa14.77□□□□□ -0.05
PHF3-209ENST00000509330 SLC25A13Q9UJS0 675 aa14.77□□□□□ -0.05
PHF3-209ENST00000509330 RIMKLBQ9ULI2 386 aa14.77□□□□□ -0.05
PHF3-209ENST00000509330 TTC34A8MYJ7 566 aa14.76□□□□□ -0.05
PHF3-209ENST00000509330 ITGAXP20702 1163 aa14.76□□□□□ -0.05
PHF3-209ENST00000509330 LHCGRP22888 699 aa14.76□□□□□ -0.05
PHF3-209ENST00000509330 CCND1P24385 295 aa14.76□□□□□ -0.05
PHF3-209ENST00000509330 SUOXP51687 545 aa14.76□□□□□ -0.05
PHF3-209ENST00000509330 CREB5Q02930 508 aa14.76□□□□□ -0.05
PHF3-209ENST00000509330 CACNG1Q06432 222 aa14.76□□□□□ -0.05
PHF3-209ENST00000509330 TBCCQ15814 346 aa14.76□□□□□ -0.05
PHF3-209ENST00000509330 UGT3A1Q6NUS8 523 aa14.76□□□□□ -0.05
PHF3-209ENST00000509330 RIPOR1Q6ZS17 1223 aa14.76□□□□□ -0.05
PHF3-209ENST00000509330 OR9I1Q8NGQ6 314 aa14.76□□□□□ -0.05
PHF3-209ENST00000509330 STAG3L4Q8TBR4 150 aa14.76□□□□□ -0.05
PHF3-209ENST00000509330 FUBP1Q96AE4 644 aaKnown RBP14.76□□□□□ -0.05
PHF3-209ENST00000509330 RCN3Q96D15 328 aa14.76□□□□□ -0.05
PHF3-209ENST00000509330 KLHL32Q96NJ5 620 aa14.76□□□□□ -0.05
PHF3-209ENST00000509330 PANX3Q96QZ0 392 aa14.76□□□□□ -0.05
PHF3-209ENST00000509330 HBEGFQ99075 208 aa14.76□□□□□ -0.05
PHF3-209ENST00000509330 CD274Q9NZQ7 290 aa14.76□□□□□ -0.05
PHF3-209ENST00000509330 GLYATL1P3A0A0U1RQE8 302 aa14.76□□□□□ -0.05
PHF3-209ENST00000509330 ENO3P13929 434 aaPredicted RBP14.76□□□□□ -0.05
PHF3-209ENST00000509330 PPARGP37231 505 aaPredicted RBP14.76□□□□□ -0.05
PHF3-209ENST00000509330 HK3P52790 923 aa14.76□□□□□ -0.05
PHF3-209ENST00000509330 NFATC2Q13469 925 aa14.76□□□□□ -0.05
PHF3-209ENST00000509330 MPP7Q5T2T1 576 aa14.76□□□□□ -0.05
PHF3-209ENST00000509330 CRTC1Q6UUV9 634 aa14.76□□□□□ -0.05
PHF3-209ENST00000509330 RAB44Q7Z6P3 723 aaPredicted RBP14.76□□□□□ -0.05
PHF3-209ENST00000509330 HPS6Q86YV9 775 aa14.76□□□□□ -0.05
PHF3-209ENST00000509330 SUGP1Q8IWZ8 645 aaKnown RBP14.76□□□□□ -0.05
PHF3-209ENST00000509330 NPAS2Q99743 824 aa14.76□□□□□ -0.05
PHF3-209ENST00000509330 CLPBQ9H078 707 aa14.76□□□□□ -0.05
PHF3-209ENST00000509330 VTI1BQ9UEU0 232 aa14.76□□□□□ -0.05
PHF3-209ENST00000509330 WASF2Q9Y6W5 498 aa14.76□□□□□ -0.05
PHF3-209ENST00000509330 CARNS1A5YM72 827 aa14.76□□□□□ -0.05
PHF3-209ENST00000509330 EIF4E1BA6NMX2 242 aaKnown RBP14.76□□□□□ -0.05
PHF3-209ENST00000509330 PRMT5O14744 637 aaPredicted RBP14.76□□□□□ -0.05
PHF3-209ENST00000509330 HTRA2O43464 458 aaPredicted RBP14.76□□□□□ -0.05
PHF3-209ENST00000509330 TM7SF2O76062 418 aa14.76□□□□□ -0.05
PHF3-209ENST00000509330 CDK14O94921 469 aa14.76□□□□□ -0.05
PHF3-209ENST00000509330 TSPAN12O95859 305 aa14.76□□□□□ -0.05
PHF3-209ENST00000509330 IL2P60568 153 aa14.76□□□□□ -0.05
PHF3-209ENST00000509330 ADGRG2Q8IZP9 1017 aa14.76□□□□□ -0.05
PHF3-209ENST00000509330 SP7Q8TDD2 431 aaPredicted RBP14.76□□□□□ -0.05
PHF3-209ENST00000509330 STMN2Q93045 179 aa14.76□□□□□ -0.05
PHF3-209ENST00000509330 KIAA1191Q96A73 305 aa14.76□□□□□ -0.05
PHF3-209ENST00000509330 TCF12Q99081 682 aa14.76□□□□□ -0.05
PHF3-209ENST00000509330 SUV39H2Q9H5I1 410 aa14.76□□□□□ -0.05
PHF3-209ENST00000509330 CCDC167Q9P0B6 97 aa14.76□□□□□ -0.05
PHF3-209ENST00000509330 SORCS3Q9UPU3 1222 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 96.6 ms