RNA–Protein interactions for RNA: ENST00000507247.5

RNF4-208, Transcript of ring finger protein 4, humanhuman

TSL 1 (best)

Gene RNF4, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-208ENST00000507247 CYTH2Q99418 400 aa14.07□□□□□ -0.16
RNF4-208ENST00000507247 DUSP15Q9H1R2 295 aaPredicted RBP14.07□□□□□ -0.16
RNF4-208ENST00000507247 FBXO6Q9NRD1 293 aaPredicted RBP14.07□□□□□ -0.16
RNF4-208ENST00000507247 ZSCAN32Q9NX65 697 aa14.07□□□□□ -0.16
RNF4-208ENST00000507247 VPS18Q9P253 973 aa14.07□□□□□ -0.16
RNF4-208ENST00000507247 PLAAQ9Y263 795 aa14.07□□□□□ -0.16
RNF4-208ENST00000507247 NFS1Q9Y697 457 aa14.07□□□□□ -0.16
RNF4-208ENST00000507247 PIKFYVEQ9Y2I7 2098 aa14.06□□□□□ -0.16
RNF4-208ENST00000507247 LRP4O75096 1905 aa14.06□□□□□ -0.16
RNF4-208ENST00000507247 EXOC1LA0A1B0GW35 172 aa14.06□□□□□ -0.16
RNF4-208ENST00000507247 POM121BA6NF01 834 aa14.06□□□□□ -0.16
RNF4-208ENST00000507247 MEI4A8MW99 385 aa14.06□□□□□ -0.16
RNF4-208ENST00000507247 POC1B-GALNT4F8VUJ3 575 aa14.06□□□□□ -0.16
RNF4-208ENST00000507247 MTX2O75431 263 aa14.06□□□□□ -0.16
RNF4-208ENST00000507247 FAM155BO75949 473 aa14.06□□□□□ -0.16
RNF4-208ENST00000507247 S1PR4O95977 384 aa14.06□□□□□ -0.16
RNF4-208ENST00000507247 MAOBP27338 520 aa14.06□□□□□ -0.16
RNF4-208ENST00000507247 TEAD1P28347 426 aa14.06□□□□□ -0.16
RNF4-208ENST00000507247 AKT2P31751 481 aa14.06□□□□□ -0.16
RNF4-208ENST00000507247 TRIM23P36406 574 aa14.06□□□□□ -0.16
RNF4-208ENST00000507247 PTGER3P43115 390 aa14.06□□□□□ -0.16
RNF4-208ENST00000507247 ABCG1P45844 678 aa14.06□□□□□ -0.16
RNF4-208ENST00000507247 CDK3Q00526 305 aa14.06□□□□□ -0.16
RNF4-208ENST00000507247 STAT4Q14765 748 aa14.06□□□□□ -0.16
RNF4-208ENST00000507247 CASP8Q14790 479 aa14.06□□□□□ -0.16
RNF4-208ENST00000507247 KLHL38Q2WGJ6 581 aa14.06□□□□□ -0.16
RNF4-208ENST00000507247 ZNF648Q5T619 568 aaPredicted RBP14.06□□□□□ -0.16
RNF4-208ENST00000507247 PMS2CLQ68D20 193 aa14.06□□□□□ -0.16
RNF4-208ENST00000507247 MRNIPQ6NTE8 343 aa14.06□□□□□ -0.16
RNF4-208ENST00000507247 ADAMTSL4Q6UY14 1074 aa14.06□□□□□ -0.16
RNF4-208ENST00000507247 ARMCX6Q7L4S7 300 aa14.06□□□□□ -0.16
RNF4-208ENST00000507247 HEATR4Q86WZ0 1026 aa14.06□□□□□ -0.16
RNF4-208ENST00000507247 ZBTB44Q8NCP5 570 aa14.06□□□□□ -0.16
RNF4-208ENST00000507247 DDHD1Q8NEL9 900 aa14.06□□□□□ -0.16
RNF4-208ENST00000507247 NAT14Q8WUY8 206 aa14.06□□□□□ -0.16
RNF4-208ENST00000507247 CDKL2Q92772 493 aa14.06□□□□□ -0.16
RNF4-208ENST00000507247 ULK4Q96C45 1275 aa14.06□□□□□ -0.16
RNF4-208ENST00000507247 COX14Q96I36 57 aa14.06□□□□□ -0.16
RNF4-208ENST00000507247 SERAC1Q96JX3 654 aa14.06□□□□□ -0.16
RNF4-208ENST00000507247 BMFQ96LC9 184 aa14.06□□□□□ -0.16
RNF4-208ENST00000507247 BOCQ9BWV1 1114 aa14.06□□□□□ -0.16
RNF4-208ENST00000507247 LGR4Q9BXB1 951 aa14.06□□□□□ -0.16
RNF4-208ENST00000507247 TEX101Q9BY14 249 aa14.06□□□□□ -0.16
RNF4-208ENST00000507247 EIF2B4Q9UI10 523 aaKnown RBP14.06□□□□□ -0.16
RNF4-208ENST00000507247 DMTF1Q9Y222 760 aa14.06□□□□□ -0.16
RNF4-208ENST00000507247 OR1A2Q9Y585 309 aa14.06□□□□□ -0.16
RNF4-208ENST00000507247 OAS3Q9Y6K5 1087 aaKnown RBP14.06□□□□□ -0.16
RNF4-208ENST00000507247 IGLV3-16A0A075B6K0 115 aa14.05□□□□□ -0.16
RNF4-208ENST00000507247 PRAMEF26H0Y7S4 382 aa14.05□□□□□ -0.16
RNF4-208ENST00000507247 FPGTO14772 594 aa14.05□□□□□ -0.16
RNF4-208ENST00000507247 OR1I1O60431 355 aa14.05□□□□□ -0.16
RNF4-208ENST00000507247 LILRB5O75023 590 aa14.05□□□□□ -0.16
RNF4-208ENST00000507247 HAUS5O94927 633 aa14.05□□□□□ -0.16
RNF4-208ENST00000507247 SLC25A14O95258 325 aaPredicted RBP14.05□□□□□ -0.16
RNF4-208ENST00000507247 AHSGP02765 367 aa14.05□□□□□ -0.16
RNF4-208ENST00000507247 PYGLP06737 847 aa14.05□□□□□ -0.16
RNF4-208ENST00000507247 CD27P26842 260 aa14.05□□□□□ -0.16
RNF4-208ENST00000507247 NUDT1P36639 197 aa14.05□□□□□ -0.16
RNF4-208ENST00000507247 LEPRP48357 1165 aaKnown RBP14.05□□□□□ -0.16
RNF4-208ENST00000507247 TTPAP49638 278 aa14.05□□□□□ -0.16
RNF4-208ENST00000507247 PFN3P60673 137 aa14.05□□□□□ -0.16
RNF4-208ENST00000507247 B4GALNT1Q00973 533 aa14.05□□□□□ -0.16
RNF4-208ENST00000507247 NAB1Q13506 487 aa14.05□□□□□ -0.16
RNF4-208ENST00000507247 PLK5Q496M5 336 aa14.05□□□□□ -0.16
RNF4-208ENST00000507247 AARS2Q5JTZ9 985 aaKnown RBP14.05□□□□□ -0.16
RNF4-208ENST00000507247 CNSTQ6PJW8 725 aa14.05□□□□□ -0.16
RNF4-208ENST00000507247 PACS1Q6VY07 963 aa14.05□□□□□ -0.16
RNF4-208ENST00000507247 CERS6Q6ZMG9 384 aa14.05□□□□□ -0.16
RNF4-208ENST00000507247 LPCAT2Q7L5N7 544 aa14.05□□□□□ -0.16
RNF4-208ENST00000507247 STRA8Q7Z7C7 330 aa14.05□□□□□ -0.16
RNF4-208ENST00000507247 SDCCAG8Q86SQ7 713 aaPredicted RBP14.05□□□□□ -0.16
RNF4-208ENST00000507247 SLC26A11Q86WA9 606 aa14.05□□□□□ -0.16
RNF4-208ENST00000507247 LRRC6Q86X45 466 aa14.05□□□□□ -0.16
RNF4-208ENST00000507247 IQCKQ8N0W5 287 aa14.05□□□□□ -0.16
RNF4-208ENST00000507247 SLC44A1Q8WWI5 657 aa14.05□□□□□ -0.16
RNF4-208ENST00000507247 FOXJ1Q92949 421 aa14.05□□□□□ -0.16
RNF4-208ENST00000507247 HIC2Q96JB3 615 aa14.05□□□□□ -0.16
RNF4-208ENST00000507247 SLC6A18Q96N87 628 aa14.05□□□□□ -0.16
RNF4-208ENST00000507247 ZIM3Q96PE6 472 aa14.05□□□□□ -0.16
RNF4-208ENST00000507247 PAFAH2Q99487 392 aa14.05□□□□□ -0.16
RNF4-208ENST00000507247 CPNE1Q99829 537 aa14.05□□□□□ -0.16
RNF4-208ENST00000507247 MCMBPQ9BTE3 642 aa14.05□□□□□ -0.16
RNF4-208ENST00000507247 DHRS4Q9BTZ2 278 aa14.05□□□□□ -0.16
RNF4-208ENST00000507247 APOOQ9BUR5 198 aa14.05□□□□□ -0.16
RNF4-208ENST00000507247 KCNH6Q9H252 994 aa14.05□□□□□ -0.16
RNF4-208ENST00000507247 ZDHHC3Q9NYG2 299 aa14.05□□□□□ -0.16
RNF4-208ENST00000507247 HS3ST3A1Q9Y663 406 aa14.05□□□□□ -0.16
RNF4-208ENST00000507247 NDUFS3O75489 264 aa14.04□□□□□ -0.16
RNF4-208ENST00000507247 PMLP29590 882 aa14.04□□□□□ -0.16
RNF4-208ENST00000507247 NUBP1P53384 320 aa14.04□□□□□ -0.16
RNF4-208ENST00000507247 ITIH4Q14624 930 aa14.04□□□□□ -0.16
RNF4-208ENST00000507247 LDLRAP1Q5SW96 308 aa14.04□□□□□ -0.16
RNF4-208ENST00000507247 TPRG1LQ5T0D9 272 aa14.04□□□□□ -0.16
RNF4-208ENST00000507247 LYPLAL1Q5VWZ2 237 aa14.04□□□□□ -0.16
RNF4-208ENST00000507247 KYAT3Q6YP21 454 aaKnown RBP14.04□□□□□ -0.16
RNF4-208ENST00000507247 KIAA0408Q6ZU52 694 aa14.04□□□□□ -0.16
RNF4-208ENST00000507247 ABI3BPQ7Z7G0 1075 aa14.04□□□□□ -0.16
RNF4-208ENST00000507247 GALNT7Q86SF2 657 aa14.04□□□□□ -0.16
RNF4-208ENST00000507247 C11orf74Q86VG3 221 aa14.04□□□□□ -0.16
RNF4-208ENST00000507247 PHYKPLQ8IUZ5 450 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms