RNA–Protein interactions for RNA: ENST00000506560.5

LIN54-206, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 2,757 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-206ENST00000506560 ASB8Q9H765 288 aa12.11□□□□□ -0.47
LIN54-206ENST00000506560 ATP13A3Q9H7F0 1226 aa12.11□□□□□ -0.47
LIN54-206ENST00000506560 CD84Q9UIB8 345 aa12.11□□□□□ -0.47
LIN54-206ENST00000506560 YBX2Q9Y2T7 364 aaKnown RBP12.11□□□□□ -0.47
LIN54-206ENST00000506560 C2orf16Q68DN1 1984 aa12.11□□□□□ -0.47
LIN54-206ENST00000506560 OTOL1A6NHN0 477 aaPredicted RBP12.11□□□□□ -0.47
LIN54-206ENST00000506560 TTC34A8MYJ7 566 aa12.11□□□□□ -0.47
LIN54-206ENST00000506560 SUPT3HB4E1H0 165 aa12.11□□□□□ -0.47
LIN54-206ENST00000506560 BTN3A1O00481 513 aa12.11□□□□□ -0.47
LIN54-206ENST00000506560 SUPT3HO75486 399 aa12.11□□□□□ -0.47
LIN54-206ENST00000506560 IMPDH1P20839 514 aa12.11□□□□□ -0.47
LIN54-206ENST00000506560 PRDX3P30048 256 aaKnown RBP12.11□□□□□ -0.47
LIN54-206ENST00000506560 PGM1P36871 562 aa12.11□□□□□ -0.47
LIN54-206ENST00000506560 ECT2LQ008S8 904 aa12.11□□□□□ -0.47
LIN54-206ENST00000506560 LRRC66Q68CR7 880 aa12.11□□□□□ -0.47
LIN54-206ENST00000506560 FUBP1Q96AE4 644 aaKnown RBP12.11□□□□□ -0.47
LIN54-206ENST00000506560 LINGO1Q96FE5 620 aa12.11□□□□□ -0.47
LIN54-206ENST00000506560 SLC45A3Q96JT2 553 aa12.11□□□□□ -0.47
LIN54-206ENST00000506560 CNDP1Q96KN2 507 aa12.11□□□□□ -0.47
LIN54-206ENST00000506560 C3orf30Q96M34 536 aa12.11□□□□□ -0.47
LIN54-206ENST00000506560 FAM161BQ96MY7 647 aa12.11□□□□□ -0.47
LIN54-206ENST00000506560 P2RY12Q9H244 342 aa12.11□□□□□ -0.47
LIN54-206ENST00000506560 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.11□□□□□ -0.47
LIN54-206ENST00000506560 SLC30A1Q9Y6M5 507 aa12.11□□□□□ -0.47
LIN54-206ENST00000506560 CAPN8A6NHC0 703 aa12.1□□□□□ -0.47
LIN54-206ENST00000506560 GFAPP14136 432 aa12.1□□□□□ -0.47
LIN54-206ENST00000506560 TTPAP49638 278 aa12.1□□□□□ -0.47
LIN54-206ENST00000506560 ARHGAP15Q53QZ3 475 aa12.1□□□□□ -0.47
LIN54-206ENST00000506560 ACSBG2Q5FVE4 666 aa12.1□□□□□ -0.47
LIN54-206ENST00000506560 UGT3A1Q6NUS8 523 aa12.1□□□□□ -0.47
LIN54-206ENST00000506560 VN1R2Q8NFZ6 395 aa12.1□□□□□ -0.47
LIN54-206ENST00000506560 KCNV2Q8TDN2 545 aa12.1□□□□□ -0.47
LIN54-206ENST00000506560 CXorf56Q9H5V9 222 aa12.1□□□□□ -0.47
LIN54-206ENST00000506560 FBRSL1Q9HCM7 1045 aaKnown RBP12.1□□□□□ -0.47
LIN54-206ENST00000506560 HACD3Q9P035 362 aa12.1□□□□□ -0.47
LIN54-206ENST00000506560 MRPS23Q9Y3D9 190 aaKnown RBP12.1□□□□□ -0.47
LIN54-206ENST00000506560 C5orf67F2Z3F1 127 aa12.1□□□□□ -0.47
LIN54-206ENST00000506560 CDK14O94921 469 aa12.1□□□□□ -0.47
LIN54-206ENST00000506560 SERPINA4P29622 427 aa12.1□□□□□ -0.47
LIN54-206ENST00000506560 SLC26A3P40879 764 aa12.1□□□□□ -0.47
LIN54-206ENST00000506560 CLCN7P51798 805 aa12.1□□□□□ -0.47
LIN54-206ENST00000506560 PTSQ03393 145 aa12.1□□□□□ -0.47
LIN54-206ENST00000506560 CACNG1Q06432 222 aa12.1□□□□□ -0.47
LIN54-206ENST00000506560 NFATC2Q13469 925 aa12.1□□□□□ -0.47
LIN54-206ENST00000506560 NAA25Q14CX7 972 aa12.1□□□□□ -0.47
LIN54-206ENST00000506560 OR2A12Q8NGT7 310 aa12.1□□□□□ -0.47
LIN54-206ENST00000506560 PHOSPHO2Q8TCD6 241 aa12.1□□□□□ -0.47
LIN54-206ENST00000506560 TRPC4APQ8TEL6 797 aa12.1□□□□□ -0.47
LIN54-206ENST00000506560 KIAA1191Q96A73 305 aa12.1□□□□□ -0.47
LIN54-206ENST00000506560 PLEKHG4BQ96PX9 1271 aa12.1□□□□□ -0.47
LIN54-206ENST00000506560 TCF12Q99081 682 aa12.1□□□□□ -0.47
LIN54-206ENST00000506560 SUV39H2Q9H5I1 410 aa12.1□□□□□ -0.47
LIN54-206ENST00000506560 ZDHHC4Q9NPG8 344 aa12.1□□□□□ -0.47
LIN54-206ENST00000506560 SEMA4BQ9NPR2 832 aaPredicted RBP12.1□□□□□ -0.47
LIN54-206ENST00000506560 CORO1CQ9ULV4 474 aaPredicted RBP12.1□□□□□ -0.47
LIN54-206ENST00000506560 RNF112Q9ULX5 631 aa12.1□□□□□ -0.47
LIN54-206ENST00000506560 CDYLQ9Y232 598 aa12.1□□□□□ -0.47
LIN54-206ENST00000506560 ATG2BQ96BY7 2078 aa12.09□□□□□ -0.47
LIN54-206ENST00000506560 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.09□□□□□ -0.47
LIN54-206ENST00000506560 PDE5AO76074 875 aa12.09□□□□□ -0.47
LIN54-206ENST00000506560 PIK3R1P27986 724 aa12.09□□□□□ -0.47
LIN54-206ENST00000506560 EEF1DP29692 281 aaKnown RBP12.09□□□□□ -0.47
LIN54-206ENST00000506560 METAP1P53582 386 aa12.09□□□□□ -0.47
LIN54-206ENST00000506560 SNRPD1P62314 119 aaKnown RBP12.09□□□□□ -0.47
LIN54-206ENST00000506560 HERVK_113P63132 956 aa12.09□□□□□ -0.47
LIN54-206ENST00000506560 TMPRSS6Q8IU80 811 aa12.09□□□□□ -0.47
LIN54-206ENST00000506560 HMGCLL1Q8TB92 370 aa12.09□□□□□ -0.47
LIN54-206ENST00000506560 KLHL32Q96NJ5 620 aa12.09□□□□□ -0.47
LIN54-206ENST00000506560 TUBB6Q9BUF5 446 aa12.09□□□□□ -0.47
LIN54-206ENST00000506560 ERVK-6Q9BXR3 956 aa12.09□□□□□ -0.47
LIN54-206ENST00000506560 CIPCQ9C0C6 399 aa12.09□□□□□ -0.47
LIN54-206ENST00000506560 DERL2Q9GZP9 239 aa12.09□□□□□ -0.47
LIN54-206ENST00000506560 ZBTB26Q9HCK0 441 aa12.09□□□□□ -0.47
LIN54-206ENST00000506560 TRMT6Q9UJA5 497 aaKnown RBP12.09□□□□□ -0.47
LIN54-206ENST00000506560 E5RI56 91 aa12.09□□□□□ -0.47
LIN54-206ENST00000506560 SOCS5O75159 536 aa12.09□□□□□ -0.47
LIN54-206ENST00000506560 VPS26AO75436 327 aa12.09□□□□□ -0.47
LIN54-206ENST00000506560 COX4I1P13073 169 aa12.09□□□□□ -0.47
LIN54-206ENST00000506560 COPAP53621 1224 aa12.09□□□□□ -0.47
LIN54-206ENST00000506560 RAD51Q06609 339 aa12.09□□□□□ -0.47
LIN54-206ENST00000506560 GPM6BQ13491 265 aa12.09□□□□□ -0.47
LIN54-206ENST00000506560 CUL3Q13618 768 aa12.09□□□□□ -0.47
LIN54-206ENST00000506560 SHHQ15465 462 aa12.09□□□□□ -0.47
LIN54-206ENST00000506560 CARD16Q5EG05 197 aa12.09□□□□□ -0.47
LIN54-206ENST00000506560 WLSQ5T9L3 541 aa12.09□□□□□ -0.47
LIN54-206ENST00000506560 SNX32Q86XE0 403 aa12.09□□□□□ -0.47
LIN54-206ENST00000506560 SMG7Q92540 1137 aaKnown RBP12.09□□□□□ -0.47
LIN54-206ENST00000506560 ECHDC3Q96DC8 303 aa12.09□□□□□ -0.47
LIN54-206ENST00000506560 L3HYPDHQ96EM0 354 aa12.09□□□□□ -0.47
LIN54-206ENST00000506560 TFB2MQ9H5Q4 396 aaKnown RBP12.09□□□□□ -0.47
LIN54-206ENST00000506560 ZNF385DQ9H6B1 395 aa12.09□□□□□ -0.47
LIN54-206ENST00000506560 SLC7A8Q9UHI5 535 aa12.09□□□□□ -0.47
LIN54-206ENST00000506560 MCM8Q9UJA3 840 aa12.09□□□□□ -0.47
LIN54-206ENST00000506560 COPG1Q9Y678 874 aaKnown RBP12.09□□□□□ -0.47
LIN54-206ENST00000506560 PLXNB3Q9ULL4 1909 aa12.09□□□□□ -0.47
LIN54-206ENST00000506560 TCF20Q9UGU0 1960 aaKnown RBP12.09□□□□□ -0.47
LIN54-206ENST00000506560 GLYATL1P3A0A0U1RQE8 302 aa12.08□□□□□ -0.48
LIN54-206ENST00000506560 EPOPA6NHQ4 379 aa12.08□□□□□ -0.48
LIN54-206ENST00000506560 RFXAPO00287 272 aa12.08□□□□□ -0.48
LIN54-206ENST00000506560 PRMT5O14744 637 aaPredicted RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms