RNA–Protein interactions for RNA: ENST00000504841.6

NPIPB3-203, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

APPRIS P1 TSL 1 (best)

Gene NPIPB3, Length 1,254 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-203ENST00000504841 RELNP78509 3460 aa6.81□□□□□ -1.32
NPIPB3-203ENST00000504841 MN1Q10571 1320 aaPredicted RBP6.81□□□□□ -1.32
NPIPB3-203ENST00000504841 KIR2DS5A0A0G2JLQ3 304 aa6.81□□□□□ -1.32
NPIPB3-203ENST00000504841 A0A0G2JNG1 304 aa6.81□□□□□ -1.32
NPIPB3-203ENST00000504841 TCRBV5S1A1TA0A578 114 aa6.81□□□□□ -1.32
NPIPB3-203ENST00000504841 LILRA5A6NI73 299 aa6.81□□□□□ -1.32
NPIPB3-203ENST00000504841 TMCO5BA8MYB1 307 aa6.81□□□□□ -1.32
NPIPB3-203ENST00000504841 TCP11X1B4DZS4 312 aa6.81□□□□□ -1.32
NPIPB3-203ENST00000504841 KIR2DS3K7RE56 304 aa6.81□□□□□ -1.32
NPIPB3-203ENST00000504841 KIF1CO43896 1103 aaKnown RBP6.81□□□□□ -1.32
NPIPB3-203ENST00000504841 DNAJC6O75061 913 aa6.81□□□□□ -1.32
NPIPB3-203ENST00000504841 SPAG6O75602 509 aa6.81□□□□□ -1.32
NPIPB3-203ENST00000504841 TIAF1O95411 115 aa6.81□□□□□ -1.32
NPIPB3-203ENST00000504841 CLDN1O95832 211 aa6.81□□□□□ -1.32
NPIPB3-203ENST00000504841 VIPP01282 170 aa6.81□□□□□ -1.32
NPIPB3-203ENST00000504841 SLC4A1P02730 911 aa6.81□□□□□ -1.32
NPIPB3-203ENST00000504841 PDHA1P08559 390 aa6.81□□□□□ -1.32
NPIPB3-203ENST00000504841 ANKRD34CP0C6C1 535 aa6.81□□□□□ -1.32
NPIPB3-203ENST00000504841 CCNYL3P0C7X3 344 aa6.81□□□□□ -1.32
NPIPB3-203ENST00000504841 F3P13726 295 aa6.81□□□□□ -1.32
NPIPB3-203ENST00000504841 TNFRSF8P28908 595 aa6.81□□□□□ -1.32
NPIPB3-203ENST00000504841 HSPA9P38646 679 aaKnown RBP6.81□□□□□ -1.32
NPIPB3-203ENST00000504841 MMP13P45452 471 aa6.81□□□□□ -1.32
NPIPB3-203ENST00000504841 JAM2P57087 298 aa6.81□□□□□ -1.32
NPIPB3-203ENST00000504841 DPTQ07507 201 aa6.81□□□□□ -1.32
NPIPB3-203ENST00000504841 ITKQ08881 620 aa6.81□□□□□ -1.32
NPIPB3-203ENST00000504841 SEMA5AQ13591 1074 aa6.81□□□□□ -1.32
NPIPB3-203ENST00000504841 ESPL1Q14674 2120 aa6.81□□□□□ -1.32
NPIPB3-203ENST00000504841 KIR2DS5Q14953 304 aa6.81□□□□□ -1.32
NPIPB3-203ENST00000504841 DPCR1Q3MIW9 517 aa6.81□□□□□ -1.32
NPIPB3-203ENST00000504841 IRGCQ6NXR0 463 aa6.81□□□□□ -1.32
NPIPB3-203ENST00000504841 CRTC3Q6UUV7 619 aa6.81□□□□□ -1.32
NPIPB3-203ENST00000504841 FAM92BQ6ZTR7 304 aa6.81□□□□□ -1.32
NPIPB3-203ENST00000504841 LYSMD3Q7Z3D4 306 aa6.81□□□□□ -1.32
NPIPB3-203ENST00000504841 PHYKPLQ8IUZ5 450 aa6.81□□□□□ -1.32
NPIPB3-203ENST00000504841 CBARPQ8N350 705 aaPredicted RBP6.81□□□□□ -1.32
NPIPB3-203ENST00000504841 TTC30BQ8N4P2 665 aa6.81□□□□□ -1.32
NPIPB3-203ENST00000504841 ATPAF2Q8N5M1 289 aa6.81□□□□□ -1.32
NPIPB3-203ENST00000504841 EXD1Q8NHP7 514 aa6.81□□□□□ -1.32
NPIPB3-203ENST00000504841 NSMCE1Q8WV22 266 aa6.81□□□□□ -1.32
NPIPB3-203ENST00000504841 WNT2BQ93097 391 aa6.81□□□□□ -1.32
NPIPB3-203ENST00000504841 PLEKHG4BQ96PX9 1271 aa6.81□□□□□ -1.32
NPIPB3-203ENST00000504841 MCCC1Q96RQ3 725 aaPredicted RBP6.81□□□□□ -1.32
NPIPB3-203ENST00000504841 MGME1Q9BQP7 344 aa6.81□□□□□ -1.32
NPIPB3-203ENST00000504841 EPB41L1Q9H4G0 881 aa6.81□□□□□ -1.32
NPIPB3-203ENST00000504841 ARFGAP3Q9NP61 516 aa6.81□□□□□ -1.32
NPIPB3-203ENST00000504841 NT5MQ9NPB1 228 aa6.81□□□□□ -1.32
NPIPB3-203ENST00000504841 SLAMF7Q9NQ25 335 aa6.81□□□□□ -1.32
NPIPB3-203ENST00000504841 LHX9Q9NQ69 397 aa6.81□□□□□ -1.32
NPIPB3-203ENST00000504841 OGFRQ9NZT2 677 aa6.81□□□□□ -1.32
NPIPB3-203ENST00000504841 PADI1Q9ULC6 663 aa6.81□□□□□ -1.32
NPIPB3-203ENST00000504841 TTLL3Q9Y4R7 772 aa6.81□□□□□ -1.32
NPIPB3-203ENST00000504841 USP9XQ93008 2570 aaPredicted RBP6.81□□□□□ -1.32
NPIPB3-203ENST00000504841 FLNCQ14315 2725 aa6.8□□□□□ -1.32
NPIPB3-203ENST00000504841 PDZK1P1A8MUH7 402 aa6.8□□□□□ -1.32
NPIPB3-203ENST00000504841 FADS2P1A8MWK0 482 aa6.8□□□□□ -1.32
NPIPB3-203ENST00000504841 EIF3CLB5ME19 914 aaKnown RBP6.8□□□□□ -1.32
NPIPB3-203ENST00000504841 H3BRJ5 948 aa6.8□□□□□ -1.32
NPIPB3-203ENST00000504841 GRID2O43424 1007 aa6.8□□□□□ -1.32
NPIPB3-203ENST00000504841 KRT86O43790 486 aa6.8□□□□□ -1.32
NPIPB3-203ENST00000504841 PRPSAP2O60256 369 aa6.8□□□□□ -1.32
NPIPB3-203ENST00000504841 MTA2O94776 668 aa6.8□□□□□ -1.32
NPIPB3-203ENST00000504841 SORBS2O94875 1100 aaKnown RBP6.8□□□□□ -1.32
NPIPB3-203ENST00000504841 UBXN7O94888 489 aa6.8□□□□□ -1.32
NPIPB3-203ENST00000504841 DDAH2O95865 285 aa6.8□□□□□ -1.32
NPIPB3-203ENST00000504841 C9P02748 559 aa6.8□□□□□ -1.32
NPIPB3-203ENST00000504841 PYGLP06737 847 aa6.8□□□□□ -1.32
NPIPB3-203ENST00000504841 AMPD1P23109 780 aa6.8□□□□□ -1.32
NPIPB3-203ENST00000504841 MIPP30301 263 aa6.8□□□□□ -1.32
NPIPB3-203ENST00000504841 PTGIRP43119 386 aa6.8□□□□□ -1.32
NPIPB3-203ENST00000504841 STC1P52823 247 aa6.8□□□□□ -1.32
NPIPB3-203ENST00000504841 UBE2IP63279 158 aaKnown RBP6.8□□□□□ -1.32
NPIPB3-203ENST00000504841 DSC2Q02487 901 aa6.8□□□□□ -1.32
NPIPB3-203ENST00000504841 TUBB3Q13509 450 aa6.8□□□□□ -1.32
NPIPB3-203ENST00000504841 IL10RAQ13651 578 aa6.8□□□□□ -1.32
NPIPB3-203ENST00000504841 IL11RAQ14626 422 aa6.8□□□□□ -1.32
NPIPB3-203ENST00000504841 SMTNL2Q2TAL5 461 aa6.8□□□□□ -1.32
NPIPB3-203ENST00000504841 TDRD12Q587J7 1177 aaKnown RBP6.8□□□□□ -1.32
NPIPB3-203ENST00000504841 TCP11X2Q5H9J9 407 aa6.8□□□□□ -1.32
NPIPB3-203ENST00000504841 FKBP15Q5T1M5 1219 aa6.8□□□□□ -1.32
NPIPB3-203ENST00000504841 ZNF648Q5T619 568 aaPredicted RBP6.8□□□□□ -1.32
NPIPB3-203ENST00000504841 ERMARDQ5T6L9 678 aa6.8□□□□□ -1.32
NPIPB3-203ENST00000504841 MARC1Q5VT66 337 aa6.8□□□□□ -1.32
NPIPB3-203ENST00000504841 CACHD1Q5VU97 1274 aa6.8□□□□□ -1.32
NPIPB3-203ENST00000504841 ALS2CLQ60I27 953 aa6.8□□□□□ -1.32
NPIPB3-203ENST00000504841 FAM199XQ6PEV8 388 aaPredicted RBP6.8□□□□□ -1.32
NPIPB3-203ENST00000504841 TMCO3Q6UWJ1 677 aa6.8□□□□□ -1.32
NPIPB3-203ENST00000504841 TMEM26Q6ZUK4 368 aa6.8□□□□□ -1.32
NPIPB3-203ENST00000504841 PPP1R3BQ86XI6 285 aa6.8□□□□□ -1.32
NPIPB3-203ENST00000504841 APLFQ8IW19 511 aaPredicted RBP6.8□□□□□ -1.32
NPIPB3-203ENST00000504841 MCOLN2Q8IZK6 566 aa6.8□□□□□ -1.32
NPIPB3-203ENST00000504841 NDUFAF2Q8N183 169 aa6.8□□□□□ -1.32
NPIPB3-203ENST00000504841 AVL9Q8NBF6 648 aa6.8□□□□□ -1.32
NPIPB3-203ENST00000504841 LPCAT1Q8NF37 534 aa6.8□□□□□ -1.32
NPIPB3-203ENST00000504841 ANKK1Q8NFD2 765 aa6.8□□□□□ -1.32
NPIPB3-203ENST00000504841 PIH1D2Q8WWB5 315 aa6.8□□□□□ -1.32
NPIPB3-203ENST00000504841 RSC1A1Q92681 617 aa6.8□□□□□ -1.32
NPIPB3-203ENST00000504841 ZNF653Q96CK0 615 aa6.8□□□□□ -1.32
NPIPB3-203ENST00000504841 TCTN2Q96GX1 697 aa6.8□□□□□ -1.32
NPIPB3-203ENST00000504841 COX14Q96I36 57 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms