RNA–Protein interactions for RNA: ENST00000504761.6

TCOF1-207, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 4,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-207ENST00000504761 CARD16Q5EG05 197 aa14.01□□□□□ -0.17
TCOF1-207ENST00000504761 PM20D1Q6GTS8 502 aa14.01□□□□□ -0.17
TCOF1-207ENST00000504761 IYDQ6PHW0 289 aa14.01□□□□□ -0.17
TCOF1-207ENST00000504761 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.01□□□□□ -0.17
TCOF1-207ENST00000504761 FAM9CQ8IZT9 166 aa14.01□□□□□ -0.17
TCOF1-207ENST00000504761 RBM15BQ8NDT2 890 aaKnown RBP14.01□□□□□ -0.17
TCOF1-207ENST00000504761 CENPIQ92674 756 aaPredicted RBP14.01□□□□□ -0.17
TCOF1-207ENST00000504761 CCDC3Q9BQI4 270 aa14.01□□□□□ -0.17
TCOF1-207ENST00000504761 IPPKQ9H8X2 491 aa14.01□□□□□ -0.17
TCOF1-207ENST00000504761 SSU72Q9NP77 194 aaKnown RBP14.01□□□□□ -0.17
TCOF1-207ENST00000504761 SORCS3Q9UPU3 1222 aa14.01□□□□□ -0.17
TCOF1-207ENST00000504761 KCNE2Q9Y6J6 123 aa14.01□□□□□ -0.17
TCOF1-207ENST00000504761 ANKDD1BA6NHY2 528 aa14.01□□□□□ -0.17
TCOF1-207ENST00000504761 HLA-EP13747 358 aa14.01□□□□□ -0.17
TCOF1-207ENST00000504761 CTSEP14091 401 aa14.01□□□□□ -0.17
TCOF1-207ENST00000504761 PRKCHP24723 683 aa14.01□□□□□ -0.17
TCOF1-207ENST00000504761 NAE1Q13564 534 aa14.01□□□□□ -0.17
TCOF1-207ENST00000504761 MMAAQ8IVH4 418 aaKnown RBP14.01□□□□□ -0.17
TCOF1-207ENST00000504761 GSTCDQ8NEC7 633 aa14.01□□□□□ -0.17
TCOF1-207ENST00000504761 BHLHE22Q8NFJ8 381 aaPredicted RBP14.01□□□□□ -0.17
TCOF1-207ENST00000504761 MOCOSQ96EN8 888 aa14.01□□□□□ -0.17
TCOF1-207ENST00000504761 CASD1Q96PB1 797 aa14.01□□□□□ -0.17
TCOF1-207ENST00000504761 AASDHPPTQ9NRN7 309 aa14.01□□□□□ -0.17
TCOF1-207ENST00000504761 KCTD5Q9NXV2 234 aa14.01□□□□□ -0.17
TCOF1-207ENST00000504761 SNX6Q9UNH7 406 aa14.01□□□□□ -0.17
TCOF1-207ENST00000504761 TAF1LQ8IZX4 1826 aa14.01□□□□□ -0.17
TCOF1-207ENST00000504761 TGM5O43548 720 aa14□□□□□ -0.17
TCOF1-207ENST00000504761 COX7A2P14406 83 aa14□□□□□ -0.17
TCOF1-207ENST00000504761 FGFR3P22607 806 aa14□□□□□ -0.17
TCOF1-207ENST00000504761 CLCQ05315 142 aa14□□□□□ -0.17
TCOF1-207ENST00000504761 SCAPQ12770 1279 aa14□□□□□ -0.17
TCOF1-207ENST00000504761 TRAF2Q12933 501 aa14□□□□□ -0.17
TCOF1-207ENST00000504761 TMEM198Q66K66 360 aa14□□□□□ -0.17
TCOF1-207ENST00000504761 UMODL1-AS1Q8N2C9 162 aa14□□□□□ -0.17
TCOF1-207ENST00000504761 CNTD1Q8N815 330 aa14□□□□□ -0.17
TCOF1-207ENST00000504761 ZFYVE19Q96K21 471 aa14□□□□□ -0.17
TCOF1-207ENST00000504761 LENG8Q96PV6 779 aaPredicted RBP14□□□□□ -0.17
TCOF1-207ENST00000504761 RAD18Q9NS91 495 aa14□□□□□ -0.17
TCOF1-207ENST00000504761 NDRG2Q9UN36 371 aaKnown RBP14□□□□□ -0.17
TCOF1-207ENST00000504761 ANKRD31Q8N7Z5 1873 aa14□□□□□ -0.17
TCOF1-207ENST00000504761 STK16O75716 305 aa14□□□□□ -0.17
TCOF1-207ENST00000504761 SLC35G4P0C7Q5 338 aa14□□□□□ -0.17
TCOF1-207ENST00000504761 PTGER3P43115 390 aa14□□□□□ -0.17
TCOF1-207ENST00000504761 SLC34A1Q06495 639 aa14□□□□□ -0.17
TCOF1-207ENST00000504761 CYP2A13Q16696 494 aa14□□□□□ -0.17
TCOF1-207ENST00000504761 SAMD4BQ5PRF9 694 aaKnown RBP14□□□□□ -0.17
TCOF1-207ENST00000504761 CAPRIN2Q6IMN6 1127 aaKnown RBP14□□□□□ -0.17
TCOF1-207ENST00000504761 CDHR3Q6ZTQ4 885 aa14□□□□□ -0.17
TCOF1-207ENST00000504761 PLD6Q8N2A8 252 aaKnown RBP14□□□□□ -0.17
TCOF1-207ENST00000504761 OR6Y1Q8NGX8 325 aa14□□□□□ -0.17
TCOF1-207ENST00000504761 TRMOQ9BU70 441 aa14□□□□□ -0.17
TCOF1-207ENST00000504761 TRIM45Q9H8W5 580 aaPredicted RBP14□□□□□ -0.17
TCOF1-207ENST00000504761 EGFL7Q9UHF1 273 aa14□□□□□ -0.17
TCOF1-207ENST00000504761 H0Y858 1186 aa14□□□□□ -0.17
TCOF1-207ENST00000504761 VPS4BO75351 444 aa14□□□□□ -0.17
TCOF1-207ENST00000504761 EIF2S1P05198 315 aaKnown RBP14□□□□□ -0.17
TCOF1-207ENST00000504761 GDI1P31150 447 aa14□□□□□ -0.17
TCOF1-207ENST00000504761 ATP6V1E1P36543 226 aa14□□□□□ -0.17
TCOF1-207ENST00000504761 HPCAP84074 193 aa14□□□□□ -0.17
TCOF1-207ENST00000504761 CREB5Q02930 508 aa14□□□□□ -0.17
TCOF1-207ENST00000504761 CHRNA6Q15825 494 aa14□□□□□ -0.17
TCOF1-207ENST00000504761 TXNDC11Q6PKC3 985 aa14□□□□□ -0.17
TCOF1-207ENST00000504761 TMEM173Q86WV6 379 aaPredicted RBP14□□□□□ -0.17
TCOF1-207ENST00000504761 ATL1Q8WXF7 558 aa14□□□□□ -0.17
TCOF1-207ENST00000504761 TSGA13Q96PP4 275 aa14□□□□□ -0.17
TCOF1-207ENST00000504761 TCF12Q99081 682 aa14□□□□□ -0.17
TCOF1-207ENST00000504761 IL23AQ9NPF7 189 aa14□□□□□ -0.17
TCOF1-207ENST00000504761 MTMR10Q9NXD2 777 aa14□□□□□ -0.17
TCOF1-207ENST00000504761 SLCO3A1Q9UIG8 710 aa14□□□□□ -0.17
TCOF1-207ENST00000504761 KDELR3O43731 214 aa14□□□□□ -0.17
TCOF1-207ENST00000504761 OR4F21O95013 312 aa14□□□□□ -0.17
TCOF1-207ENST00000504761 ALBP02768 609 aa14□□□□□ -0.17
TCOF1-207ENST00000504761 ESR1P03372 595 aa14□□□□□ -0.17
TCOF1-207ENST00000504761 PCCBP05166 539 aa14□□□□□ -0.17
TCOF1-207ENST00000504761 RING1Q06587 406 aa14□□□□□ -0.17
TCOF1-207ENST00000504761 MAPKAPK3Q16644 382 aa14□□□□□ -0.17
TCOF1-207ENST00000504761 PLEKHG6Q3KR16 790 aa14□□□□□ -0.17
TCOF1-207ENST00000504761 PKDCCQ504Y2 493 aa14□□□□□ -0.17
TCOF1-207ENST00000504761 PIGWQ7Z7B1 504 aa14□□□□□ -0.17
TCOF1-207ENST00000504761 ZNF555Q8NEP9 628 aa14□□□□□ -0.17
TCOF1-207ENST00000504761 SORCS1Q8WY21 1168 aa14□□□□□ -0.17
TCOF1-207ENST00000504761 PYCR2Q96C36 320 aa14□□□□□ -0.17
TCOF1-207ENST00000504761 C19orf60Q96EN9 201 aa14□□□□□ -0.17
TCOF1-207ENST00000504761 ZNF317Q96PQ6 595 aaPredicted RBP14□□□□□ -0.17
TCOF1-207ENST00000504761 SH3GL1Q99961 368 aa14□□□□□ -0.17
TCOF1-207ENST00000504761 ZNF487B1APH4 448 aa13.99□□□□□ -0.17
TCOF1-207ENST00000504761 RPN2P04844 631 aa13.99□□□□□ -0.17
TCOF1-207ENST00000504761 FSHRP23945 695 aa13.99□□□□□ -0.17
TCOF1-207ENST00000504761 GRIA3P42263 894 aa13.99□□□□□ -0.17
TCOF1-207ENST00000504761 SQLEQ14534 574 aa13.99□□□□□ -0.17
TCOF1-207ENST00000504761 LSM12Q3MHD2 195 aaKnown RBP13.99□□□□□ -0.17
TCOF1-207ENST00000504761 MTSS1LQ765P7 747 aa13.99□□□□□ -0.17
TCOF1-207ENST00000504761 RTN4RL1Q86UN2 441 aaPredicted RBP13.99□□□□□ -0.17
TCOF1-207ENST00000504761 NAF1Q96HR8 494 aaKnown RBP13.99□□□□□ -0.17
TCOF1-207ENST00000504761 MRGPRX2Q96LB1 330 aa13.99□□□□□ -0.17
TCOF1-207ENST00000504761 TSC22D3Q99576 134 aa13.99□□□□□ -0.17
TCOF1-207ENST00000504761 FEM1AQ9BSK4 669 aa13.99□□□□□ -0.17
TCOF1-207ENST00000504761 STN1Q9H668 368 aaKnown RBP13.99□□□□□ -0.17
TCOF1-207ENST00000504761 COMMD8Q9NX08 183 aa13.99□□□□□ -0.17
TCOF1-207ENST00000504761 AHSPQ9NZD4 102 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms