RNA–Protein interactions for RNA: ENST00000504643.5

MATR3-210, Transcript of matrin 3, humanhuman

TSL 2

Gene MATR3, Length 2,560 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-210ENST00000504643 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.7□□□□□ -1.184e-9■■□□□ 13
MATR3-210ENST00000504643 INPP4BO15327 924 aa7.69□□□□□ -1.18
MATR3-210ENST00000504643 MAP3K6O95382 1288 aa7.69□□□□□ -1.18
MATR3-210ENST00000504643 VIPP01282 170 aa7.69□□□□□ -1.18
MATR3-210ENST00000504643 NTRK1P04629 796 aa7.69□□□□□ -1.18
MATR3-210ENST00000504643 TNNT3P45378 269 aaPredicted RBP7.69□□□□□ -1.18
MATR3-210ENST00000504643 DPYSL3Q14195 570 aa7.69□□□□□ -1.18
MATR3-210ENST00000504643 PDK1Q15118 436 aa7.69□□□□□ -1.18
MATR3-210ENST00000504643 ZNF569Q5MCW4 686 aa7.69□□□□□ -1.18
MATR3-210ENST00000504643 ZFYVE27Q5T4F4 411 aa7.69□□□□□ -1.18
MATR3-210ENST00000504643 HGSNATQ68CP4 663 aa7.69□□□□□ -1.18
MATR3-210ENST00000504643 ANKS6Q68DC2 871 aa7.69□□□□□ -1.18
MATR3-210ENST00000504643 NCBP2-AS2Q69YL0 99 aa7.69□□□□□ -1.18
MATR3-210ENST00000504643 SFTPA2Q8IWL1 248 aa7.69□□□□□ -1.18
MATR3-210ENST00000504643 TRIM48Q8IWZ4 208 aa7.69□□□□□ -1.18
MATR3-210ENST00000504643 TRAM1L1Q8N609 369 aa7.69□□□□□ -1.18
MATR3-210ENST00000504643 LPCAT1Q8NF37 534 aa7.69□□□□□ -1.18
MATR3-210ENST00000504643 C9orf43Q8TAL5 461 aaPredicted RBP7.69□□□□□ -1.18
MATR3-210ENST00000504643 PATE1Q8WXA2 126 aa7.69□□□□□ -1.18
MATR3-210ENST00000504643 CTNNBL1Q8WYA6 563 aaPredicted RBP7.69□□□□□ -1.18
MATR3-210ENST00000504643 FAF2Q96CS3 445 aa7.69□□□□□ -1.18
MATR3-210ENST00000504643 ZDHHC12Q96GR4 267 aa7.69□□□□□ -1.18
MATR3-210ENST00000504643 NAP1L5Q96NT1 182 aaPredicted RBP7.69□□□□□ -1.18
MATR3-210ENST00000504643 CTTNBP2NLQ9P2B4 639 aa7.69□□□□□ -1.18
MATR3-210ENST00000504643 SMG1Q96Q15 3661 aaKnown RBP7.69□□□□□ -1.18
MATR3-210ENST00000504643 LRRK1Q38SD2 2015 aa7.69□□□□□ -1.18
MATR3-210ENST00000504643 KALRNO60229 2985 aa7.69□□□□□ -1.18
MATR3-210ENST00000504643 KLHL33A6NCF5 533 aa7.69□□□□□ -1.18
MATR3-210ENST00000504643 SLC25A14O95258 325 aaPredicted RBP7.69□□□□□ -1.18
MATR3-210ENST00000504643 PRLP01236 227 aa7.69□□□□□ -1.18
MATR3-210ENST00000504643 C9P02748 559 aa7.69□□□□□ -1.18
MATR3-210ENST00000504643 CCNYL3P0C7X3 344 aa7.69□□□□□ -1.18
MATR3-210ENST00000504643 AMD1P17707 334 aa7.69□□□□□ -1.18
MATR3-210ENST00000504643 TCN2P20062 427 aa7.69□□□□□ -1.18
MATR3-210ENST00000504643 CSF2RBP32927 897 aa7.69□□□□□ -1.18
MATR3-210ENST00000504643 CASRP41180 1078 aa7.69□□□□□ -1.18
MATR3-210ENST00000504643 ARHGAP25P42331 645 aa7.69□□□□□ -1.18
MATR3-210ENST00000504643 UBASH3AP57075 661 aa7.69□□□□□ -1.18
MATR3-210ENST00000504643 IFI35P80217 286 aaPredicted RBP7.69□□□□□ -1.18
MATR3-210ENST00000504643 DSC2Q02487 901 aa7.69□□□□□ -1.18
MATR3-210ENST00000504643 ODF2Q5BJF6 829 aa7.69□□□□□ -1.18
MATR3-210ENST00000504643 TRAF3IP1Q8TDR0 691 aaPredicted RBP7.69□□□□□ -1.18
MATR3-210ENST00000504643 HTR3CQ8WXA8 447 aa7.69□□□□□ -1.18
MATR3-210ENST00000504643 TIMM29Q9BSF4 260 aa7.69□□□□□ -1.18
MATR3-210ENST00000504643 SPATA16Q9BXB7 569 aa7.69□□□□□ -1.18
MATR3-210ENST00000504643 RAB33BQ9H082 229 aa7.69□□□□□ -1.18
MATR3-210ENST00000504643 TRABDQ9H4I3 376 aa7.69□□□□□ -1.18
MATR3-210ENST00000504643 POT1Q9NUX5 634 aa7.69□□□□□ -1.18
MATR3-210ENST00000504643 TBC1D29Q9UFV1 150 aa7.69□□□□□ -1.18
MATR3-210ENST00000504643 CNOT6Q9ULM6 557 aaKnown RBP7.69□□□□□ -1.18
MATR3-210ENST00000504643 TTLL3Q9Y4R7 772 aa7.69□□□□□ -1.18
MATR3-210ENST00000504643 ST14Q9Y5Y6 855 aa7.69□□□□□ -1.18
MATR3-210ENST00000504643 DNMT3AQ9Y6K1 912 aaPredicted RBP7.69□□□□□ -1.18
MATR3-210ENST00000504643 KIF26BQ2KJY2 2108 aa7.69□□□□□ -1.18
MATR3-210ENST00000504643 MN1Q10571 1320 aaPredicted RBP7.69□□□□□ -1.18
MATR3-210ENST00000504643 A6NCN8 305 aa7.68□□□□□ -1.18
MATR3-210ENST00000504643 GOLGA6L19H0YKK7 550 aa7.68□□□□□ -1.18
MATR3-210ENST00000504643 PPP1R12AO14974 1030 aaPredicted RBP7.68□□□□□ -1.18
MATR3-210ENST00000504643 CHUKO15111 745 aa7.68□□□□□ -1.18
MATR3-210ENST00000504643 MFSD11O43934 449 aa7.68□□□□□ -1.18
MATR3-210ENST00000504643 STK17BO94768 372 aa7.68□□□□□ -1.18
MATR3-210ENST00000504643 IDSP22304 550 aa7.68□□□□□ -1.18
MATR3-210ENST00000504643 PPIDQ08752 370 aaKnown RBP7.68□□□□□ -1.18
MATR3-210ENST00000504643 NFATC2Q13469 925 aa7.68□□□□□ -1.18
MATR3-210ENST00000504643 CLCA4Q14CN2 919 aa7.68□□□□□ -1.18
MATR3-210ENST00000504643 QPCTQ16769 361 aa7.68□□□□□ -1.18
MATR3-210ENST00000504643 AGAP9Q5VTM2 703 aa7.68□□□□□ -1.18
MATR3-210ENST00000504643 ABRAXAS1Q6UWZ7 409 aa7.68□□□□□ -1.18
MATR3-210ENST00000504643 C6orf15Q6UXA7 325 aaPredicted RBP7.68□□□□□ -1.18
MATR3-210ENST00000504643 TMEM26Q6ZUK4 368 aa7.68□□□□□ -1.18
MATR3-210ENST00000504643 NT5DC3Q86UY8 548 aa7.68□□□□□ -1.18
MATR3-210ENST00000504643 RNF157Q96PX1 679 aa7.68□□□□□ -1.18
MATR3-210ENST00000504643 ZCCHC2Q9C0B9 1178 aaKnown RBP7.68□□□□□ -1.18
MATR3-210ENST00000504643 ZNHIT6Q9NWK9 470 aaKnown RBP7.68□□□□□ -1.18
MATR3-210ENST00000504643 EPHA6Q9UF33 1036 aa7.68□□□□□ -1.18
MATR3-210ENST00000504643 PLEKHM1Q9Y4G2 1056 aa7.68□□□□□ -1.18
MATR3-210ENST00000504643 SCN8AQ9UQD0 1980 aa7.68□□□□□ -1.18
MATR3-210ENST00000504643 AHCTF1Q8WYP5 2266 aa7.68□□□□□ -1.18
MATR3-210ENST00000504643 TRBV23OR9-2A0A075B6M9 112 aa7.68□□□□□ -1.18
MATR3-210ENST00000504643 A8MU76 341 aa7.68□□□□□ -1.18
MATR3-210ENST00000504643 MTSS1O43312 755 aa7.68□□□□□ -1.18
MATR3-210ENST00000504643 SNX2O60749 519 aa7.68□□□□□ -1.18
MATR3-210ENST00000504643 UBXN7O94888 489 aa7.68□□□□□ -1.18
MATR3-210ENST00000504643 JCHAINP01591 159 aa7.68□□□□□ -1.18
MATR3-210ENST00000504643 ACP5P13686 325 aa7.68□□□□□ -1.18
MATR3-210ENST00000504643 TCF4P15884 667 aa7.68□□□□□ -1.18
MATR3-210ENST00000504643 KDELR1P24390 212 aa7.68□□□□□ -1.18
MATR3-210ENST00000504643 HALP42357 657 aa7.68□□□□□ -1.18
MATR3-210ENST00000504643 CDC20Q12834 499 aa7.68□□□□□ -1.18
MATR3-210ENST00000504643 MMRN1Q13201 1228 aa7.68□□□□□ -1.18
MATR3-210ENST00000504643 SRSF6Q13247 344 aaKnown RBP7.68□□□□□ -1.18
MATR3-210ENST00000504643 GTF2H3Q13889 308 aa7.68□□□□□ -1.18
MATR3-210ENST00000504643 TRIM14Q14142 442 aa7.68□□□□□ -1.18
MATR3-210ENST00000504643 SNAP47Q5SQN1 464 aa7.68□□□□□ -1.18
MATR3-210ENST00000504643 E4F1Q66K89 784 aaPredicted RBP7.68□□□□□ -1.18
MATR3-210ENST00000504643 TXNRD3NBQ6F5E7 133 aa7.68□□□□□ -1.18
MATR3-210ENST00000504643 TMC3Q7Z5M5 1100 aa7.68□□□□□ -1.18
MATR3-210ENST00000504643 LRRTM4Q86VH4 590 aa7.68□□□□□ -1.18
MATR3-210ENST00000504643 JPH3Q8WXH2 748 aaPredicted RBP7.68□□□□□ -1.18
MATR3-210ENST00000504643 GLYATL1Q969I3 302 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms