RNA–Protein interactions for RNA: ENST00000504220.6

PCDH11X-208, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-208ENST00000504220 POLDIP3Q9BY77 421 aaKnown RBP3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 OR51B5Q9H339 312 aa3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 NOL6Q9H6R4 1146 aaKnown RBP3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 COPS7BQ9H9Q2 264 aaPredicted RBP3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 AKIP1Q9NQ31 210 aa3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 PLK2Q9NYY3 685 aa3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 CD274Q9NZQ7 290 aa3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 RUVBL2Q9Y230 463 aaKnown RBP3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 PCDHA3Q9Y5H8 950 aa3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 PMF1-BGLAPU3KQ54 211 aa3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 ZNF318Q5VUA4 2279 aa3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 SSC5DA1L4H1 1573 aa3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 FAM172BPA6NC97 362 aa3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 CFAP99D6REC4 459 aa3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 FOXE1O00358 373 aaPredicted RBP3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 BTN3A1O00481 513 aa3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 SCAMP3O14828 347 aaKnown RBP3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 INPP4BO15327 924 aa3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 ZBTB24O43167 697 aaPredicted RBP3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 LZTS3O60299 673 aaPredicted RBP3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 SRP72O76094 671 aaKnown RBP3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 PRLP01236 227 aa3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 CHRNA1P02708 482 aa3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 ASGR1P07306 291 aa3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 C8BP07358 591 aa3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 CYP11B1P15538 503 aa3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 PTPN4P29074 926 aa3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 GRIK1P39086 918 aa3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 HTR2BP41595 481 aa3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 PPP3CCP48454 512 aa3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 KRT6CP48668 564 aa3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 SUOXP51687 545 aa3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 NDST2P52849 883 aa3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 AP1S2P56377 157 aa3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 UBE2IP63279 158 aaKnown RBP3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 RPL6Q02878 288 aaKnown RBP3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 PPP3CAQ08209 521 aa3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 CSHL1Q14406 222 aa3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 CCNG2Q16589 344 aa3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 PLA2G4EQ3MJ16 856 aa3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 PERM1Q5SV97 790 aa3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 CENPPQ6IPU0 288 aa3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 ADNP2Q6IQ32 1131 aa3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 RETSATQ6NUM9 610 aa3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 TMEM81Q6P7N7 255 aa3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 ANKS3Q6ZW76 656 aa3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 PLEKHM3Q6ZWE6 761 aa3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 SV2AQ7L0J3 742 aa3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 LPCAT2Q7L5N7 544 aa3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 TMC3Q7Z5M5 1100 aa3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 HERC6Q8IVU3 1022 aa3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 PPIL6Q8IXY8 311 aa3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 MTMR14Q8NCE2 650 aa3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 ZNF555Q8NEP9 628 aa3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 ADAM32Q8TC27 787 aa3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 CELF6Q96J87 481 aaKnown RBP3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 TMEM79Q9BSE2 394 aa3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 ILKAPQ9H0C8 392 aaPredicted RBP3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 FAM96AQ9H5X1 160 aa3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 VPS45Q9NRW7 570 aa3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 DDIT4Q9NX09 232 aa3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 COQ3Q9NZJ6 369 aa3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 CCDC167Q9P0B6 97 aa3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 ACTR3BQ9P1U1 418 aa3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 MBD2Q9UBB5 411 aa3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 SLCO3A1Q9UIG8 710 aa3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 PTBP2Q9UKA9 531 aaKnown RBP3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 NUDT5Q9UKK9 219 aa3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 CDYLQ9Y232 598 aa3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 PRG3Q9Y2Y8 225 aaPredicted RBP3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 TIMM13Q9Y5L4 95 aaPredicted RBP3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 COL2A1P02458 1487 aaPredicted RBP3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 C2orf71A6NGG8 1288 aa3.65□□□□□ -1.82
PCDH11X-208ENST00000504220 ZNF487B1APH4 448 aa3.65□□□□□ -1.82
PCDH11X-208ENST00000504220 J3QRK9 145 aa3.65□□□□□ -1.82
PCDH11X-208ENST00000504220 M0QYT0 321 aa3.65□□□□□ -1.82
PCDH11X-208ENST00000504220 RNF103O00237 685 aa3.65□□□□□ -1.82
PCDH11X-208ENST00000504220 EEF2KO00418 725 aaKnown RBP3.65□□□□□ -1.82
PCDH11X-208ENST00000504220 NR5A2O00482 541 aa3.65□□□□□ -1.82
PCDH11X-208ENST00000504220 NKRFO15226 690 aaKnown RBP eCLIP3.65□□□□□ -1.82
PCDH11X-208ENST00000504220 RAD51BO15315 384 aa3.65□□□□□ -1.82
PCDH11X-208ENST00000504220 IRAK2O43187 625 aa3.65□□□□□ -1.82
PCDH11X-208ENST00000504220 RIPK2O43353 540 aa3.65□□□□□ -1.82
PCDH11X-208ENST00000504220 TBC1D4O60343 1298 aa3.65□□□□□ -1.82
PCDH11X-208ENST00000504220 BCAS1O75363 584 aaPredicted RBP3.65□□□□□ -1.82
PCDH11X-208ENST00000504220 IFNA14P01570 189 aa3.65□□□□□ -1.82
PCDH11X-208ENST00000504220 RB1P06400 928 aa3.65□□□□□ -1.82
PCDH11X-208ENST00000504220 IRF1P10914 325 aa3.65□□□□□ -1.82
PCDH11X-208ENST00000504220 SLC2A3P11169 496 aa3.65□□□□□ -1.82
PCDH11X-208ENST00000504220 RALBP11234 206 aa3.65□□□□□ -1.82
PCDH11X-208ENST00000504220 RAG1P15918 1043 aa3.65□□□□□ -1.82
PCDH11X-208ENST00000504220 ZNF30P17039 623 aa3.65□□□□□ -1.82
PCDH11X-208ENST00000504220 ITGB6P18564 788 aa3.65□□□□□ -1.82
PCDH11X-208ENST00000504220 NDUFV2P19404 249 aa3.65□□□□□ -1.82
PCDH11X-208ENST00000504220 ACAT1P24752 427 aaKnown RBP3.65□□□□□ -1.82
PCDH11X-208ENST00000504220 PSMB9P28065 219 aa3.65□□□□□ -1.82
PCDH11X-208ENST00000504220 AKT1P31749 480 aa3.65□□□□□ -1.82
PCDH11X-208ENST00000504220 RPL5P46777 297 aaKnown RBP3.65□□□□□ -1.82
PCDH11X-208ENST00000504220 SLC9A3P48764 834 aa3.65□□□□□ -1.82
PCDH11X-208ENST00000504220 HOXA1P49639 335 aaPredicted RBP3.65□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms