RNA–Protein interactions for RNA: ENST00000504173.1

NUP54-203, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 314 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-203ENST00000504173 KYAT3Q6YP21 454 aaKnown RBP9.97□□□□□ -0.81
NUP54-203ENST00000504173 KDM7AQ6ZMT4 941 aa9.97□□□□□ -0.81
NUP54-203ENST00000504173 NLRP9Q7RTR0 991 aa9.97□□□□□ -0.81
NUP54-203ENST00000504173 RABEPKQ7Z6M1 372 aa9.97□□□□□ -0.81
NUP54-203ENST00000504173 PDIK1LQ8N165 341 aa9.97□□□□□ -0.81
NUP54-203ENST00000504173 PLA2G15Q8NCC3 412 aa9.97□□□□□ -0.81
NUP54-203ENST00000504173 GPR26Q8NDV2 337 aa9.97□□□□□ -0.81
NUP54-203ENST00000504173 C1orf216Q8TAB5 229 aa9.97□□□□□ -0.81
NUP54-203ENST00000504173 CEP76Q8TAP6 659 aa9.97□□□□□ -0.81
NUP54-203ENST00000504173 FAM174AQ8TBP5 190 aa9.97□□□□□ -0.81
NUP54-203ENST00000504173 PTCD2Q8WV60 388 aaKnown RBP9.97□□□□□ -0.81
NUP54-203ENST00000504173 SKA1Q96BD8 255 aa9.97□□□□□ -0.81
NUP54-203ENST00000504173 KLHDC7BQ96G42 594 aa9.97□□□□□ -0.81
NUP54-203ENST00000504173 DNAJC1Q96KC8 554 aaKnown RBP9.97□□□□□ -0.81
NUP54-203ENST00000504173 PWWP2AQ96N64 755 aa9.97□□□□□ -0.81
NUP54-203ENST00000504173 PLEKHG4BQ96PX9 1271 aa9.97□□□□□ -0.81
NUP54-203ENST00000504173 RHOXF2Q9BQY4 288 aa9.97□□□□□ -0.81
NUP54-203ENST00000504173 SPATA16Q9BXB7 569 aa9.97□□□□□ -0.81
NUP54-203ENST00000504173 FAM114A2Q9NRY5 505 aa9.97□□□□□ -0.81
NUP54-203ENST00000504173 TMEM74BQ9NUR3 256 aa9.97□□□□□ -0.81
NUP54-203ENST00000504173 NLE1Q9NVX2 485 aaPredicted RBP9.97□□□□□ -0.81
NUP54-203ENST00000504173 GRHL1Q9NZI5 618 aa9.97□□□□□ -0.81
NUP54-203ENST00000504173 NFKBIL1Q9UBC1 381 aaPredicted RBP9.97□□□□□ -0.81
NUP54-203ENST00000504173 DMGDHQ9UI17 866 aaKnown RBP9.97□□□□□ -0.81
NUP54-203ENST00000504173 FKBPLQ9UIM3 349 aa9.97□□□□□ -0.81
NUP54-203ENST00000504173 SOX13Q9UN79 622 aa9.97□□□□□ -0.81
NUP54-203ENST00000504173 MAD1L1Q9Y6D9 718 aa9.97□□□□□ -0.81
NUP54-203ENST00000504173 SCN8AQ9UQD0 1980 aa9.96□□□□□ -0.81
NUP54-203ENST00000504173 GLYATL1P3A0A0U1RQE8 302 aa9.96□□□□□ -0.82
NUP54-203ENST00000504173 A0A1W2PR77 199 aa9.96□□□□□ -0.82
NUP54-203ENST00000504173 MROH6A6NGR9 719 aa9.96□□□□□ -0.82
NUP54-203ENST00000504173 K7ESM1 405 aa9.96□□□□□ -0.82
NUP54-203ENST00000504173 CCL22O00626 93 aa9.96□□□□□ -0.82
NUP54-203ENST00000504173 TP73O15350 636 aa9.96□□□□□ -0.82
NUP54-203ENST00000504173 MAGEC1O60732 1142 aa9.96□□□□□ -0.82
NUP54-203ENST00000504173 PYGLP06737 847 aa9.96□□□□□ -0.82
NUP54-203ENST00000504173 THEGLP0DJG4 465 aa9.96□□□□□ -0.82
NUP54-203ENST00000504173 CD59P13987 128 aa9.96□□□□□ -0.82
NUP54-203ENST00000504173 RABIFP47224 123 aa9.96□□□□□ -0.82
NUP54-203ENST00000504173 CSNK1EP49674 416 aaKnown RBP9.96□□□□□ -0.82
NUP54-203ENST00000504173 CSRP3P50461 194 aa9.96□□□□□ -0.82
NUP54-203ENST00000504173 PFN3P60673 137 aa9.96□□□□□ -0.82
NUP54-203ENST00000504173 DHX9Q08211 1270 aaKnown RBP9.96□□□□□ -0.82
NUP54-203ENST00000504173 CYP4F3Q08477 520 aa9.96□□□□□ -0.82
NUP54-203ENST00000504173 OVGP1Q12889 678 aa9.96□□□□□ -0.82
NUP54-203ENST00000504173 INPP5AQ14642 412 aa9.96□□□□□ -0.82
NUP54-203ENST00000504173 TRADDQ15628 312 aa9.96□□□□□ -0.82
NUP54-203ENST00000504173 FNBP1LQ5T0N5 605 aa9.96□□□□□ -0.82
NUP54-203ENST00000504173 ARMC3Q5W041 872 aa9.96□□□□□ -0.82
NUP54-203ENST00000504173 FAM151BQ6UXP7 276 aa9.96□□□□□ -0.82
NUP54-203ENST00000504173 Q6ZSR6 202 aa9.96□□□□□ -0.82
NUP54-203ENST00000504173 TMPRSS7Q7RTY8 843 aa9.96□□□□□ -0.82
NUP54-203ENST00000504173 ABI3BPQ7Z7G0 1075 aa9.96□□□□□ -0.82
NUP54-203ENST00000504173 IQCHQ86VS3 1027 aa9.96□□□□□ -0.82
NUP54-203ENST00000504173 NLRP8Q86W28 1048 aa9.96□□□□□ -0.82
NUP54-203ENST00000504173 HEATR4Q86WZ0 1026 aa9.96□□□□□ -0.82
NUP54-203ENST00000504173 PELI3Q8N2H9 469 aa9.96□□□□□ -0.82
NUP54-203ENST00000504173 MPP5Q8N3R9 675 aa9.96□□□□□ -0.82
NUP54-203ENST00000504173 TRAM1L1Q8N609 369 aa9.96□□□□□ -0.82
NUP54-203ENST00000504173 FAM181AQ8N9Y4 354 aa9.96□□□□□ -0.82
NUP54-203ENST00000504173 MFSD2AQ8NA29 543 aa9.96□□□□□ -0.82
NUP54-203ENST00000504173 OR13H1Q8NG92 308 aa9.96□□□□□ -0.82
NUP54-203ENST00000504173 SEC14L1Q92503 715 aa9.96□□□□□ -0.82
NUP54-203ENST00000504173 PEX13Q92968 403 aa9.96□□□□□ -0.82
NUP54-203ENST00000504173 ART4Q93070 314 aa9.96□□□□□ -0.82
NUP54-203ENST00000504173 WBP1Q96G27 269 aa9.96□□□□□ -0.82
NUP54-203ENST00000504173 BMFQ96LC9 184 aa9.96□□□□□ -0.82
NUP54-203ENST00000504173 AGAP2Q99490 1192 aa9.96□□□□□ -0.82
NUP54-203ENST00000504173 C19orf43Q9BQ61 176 aa9.96□□□□□ -0.82
NUP54-203ENST00000504173 ZSCAN5AQ9BUG6 496 aa9.96□□□□□ -0.82
NUP54-203ENST00000504173 APOOQ9BUR5 198 aa9.96□□□□□ -0.82
NUP54-203ENST00000504173 KIFC1Q9BW19 673 aa9.96□□□□□ -0.82
NUP54-203ENST00000504173 WDR26Q9H7D7 661 aa9.96□□□□□ -0.82
NUP54-203ENST00000504173 MRM3Q9HC36 420 aaKnown RBP9.96□□□□□ -0.82
NUP54-203ENST00000504173 CHRAC1Q9NRG0 131 aa9.96□□□□□ -0.82
NUP54-203ENST00000504173 PHPT1Q9NRX4 125 aaPredicted RBP9.96□□□□□ -0.82
NUP54-203ENST00000504173 SLC2A6Q9UGQ3 507 aa9.96□□□□□ -0.82
NUP54-203ENST00000504173 APPL1Q9UKG1 709 aa9.96□□□□□ -0.82
NUP54-203ENST00000504173 RIMKLBQ9ULI2 386 aa9.96□□□□□ -0.82
NUP54-203ENST00000504173 OR1A2Q9Y585 309 aa9.96□□□□□ -0.82
NUP54-203ENST00000504173 FLNCQ14315 2725 aa9.96□□□□□ -0.82
NUP54-203ENST00000504173 LRRK2Q5S007 2527 aa9.95□□□□□ -0.82
NUP54-203ENST00000504173 A0A1B0GVT2 93 aa9.95□□□□□ -0.82
NUP54-203ENST00000504173 MAGEB16A2A368 324 aa9.95□□□□□ -0.82
NUP54-203ENST00000504173 FADS2P1A8MWK0 482 aa9.95□□□□□ -0.82
NUP54-203ENST00000504173 B8ZZF3 427 aa9.95□□□□□ -0.82
NUP54-203ENST00000504173 TLR4O00206 839 aa9.95□□□□□ -0.82
NUP54-203ENST00000504173 CACNB4O00305 520 aaPredicted RBP9.95□□□□□ -0.82
NUP54-203ENST00000504173 TOR1BO14657 336 aa9.95□□□□□ -0.82
NUP54-203ENST00000504173 VILLO15195 856 aa9.95□□□□□ -0.82
NUP54-203ENST00000504173 INPP4BO15327 924 aa9.95□□□□□ -0.82
NUP54-203ENST00000504173 BANF1O75531 89 aa9.95□□□□□ -0.82
NUP54-203ENST00000504173 PRAMEF1O95521 474 aa9.95□□□□□ -0.82
NUP54-203ENST00000504173 SOD1P00441 154 aa9.95□□□□□ -0.82
NUP54-203ENST00000504173 WNT1P04628 370 aa9.95□□□□□ -0.82
NUP54-203ENST00000504173 ITGALP20701 1170 aa9.95□□□□□ -0.82
NUP54-203ENST00000504173 NMBRP28336 390 aa9.95□□□□□ -0.82
NUP54-203ENST00000504173 TEAD1P28347 426 aa9.95□□□□□ -0.82
NUP54-203ENST00000504173 MC4RP32245 332 aa9.95□□□□□ -0.82
NUP54-203ENST00000504173 ARSDP51689 593 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms