RNA–Protein interactions for RNA: ENST00000504000.1

SNF8-203, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 1,899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-203ENST00000504000 TUSC3Q13454 348 aa14.89□□□□□ -0.03
SNF8-203ENST00000504000 FAM117BQ6P1L5 589 aa14.89□□□□□ -0.03
SNF8-203ENST00000504000 PGBD5Q8N414 524 aa14.89□□□□□ -0.03
SNF8-203ENST00000504000 CHCHD4Q8N4Q1 142 aa14.89□□□□□ -0.03
SNF8-203ENST00000504000 CYGBQ8WWM9 190 aa14.89□□□□□ -0.03
SNF8-203ENST00000504000 ISG20Q96AZ6 181 aaKnown RBP14.89□□□□□ -0.03
SNF8-203ENST00000504000 THAP11Q96EK4 314 aa14.89□□□□□ -0.03
SNF8-203ENST00000504000 HSPBAP1Q96EW2 488 aa14.89□□□□□ -0.03
SNF8-203ENST00000504000 RDH12Q96NR8 316 aa14.89□□□□□ -0.03
SNF8-203ENST00000504000 NSUN5Q96P11 429 aaKnown RBP14.89□□□□□ -0.03
SNF8-203ENST00000504000 KLHL5Q96PQ7 755 aa14.89□□□□□ -0.03
SNF8-203ENST00000504000 LRRC3Q9BY71 257 aa14.89□□□□□ -0.03
SNF8-203ENST00000504000 FBXO44Q9H4M3 255 aa14.89□□□□□ -0.03
SNF8-203ENST00000504000 TBC1D23Q9NUY8 699 aa14.89□□□□□ -0.03
SNF8-203ENST00000504000 TAS2R13Q9NYV9 303 aa14.89□□□□□ -0.03
SNF8-203ENST00000504000 CLEC11AQ9Y240 323 aa14.89□□□□□ -0.03
SNF8-203ENST00000504000 PTGDR2Q9Y5Y4 395 aa14.89□□□□□ -0.03
SNF8-203ENST00000504000 FAM234BA2RU67 622 aa14.88□□□□□ -0.03
SNF8-203ENST00000504000 CCDC154A6NI56 674 aa14.88□□□□□ -0.03
SNF8-203ENST00000504000 IFRD1O00458 451 aaPredicted RBP14.88□□□□□ -0.03
SNF8-203ENST00000504000 GIPC1O14908 333 aa14.88□□□□□ -0.03
SNF8-203ENST00000504000 SOAT2O75908 522 aa14.88□□□□□ -0.03
SNF8-203ENST00000504000 ATE1O95260 518 aa14.88□□□□□ -0.03
SNF8-203ENST00000504000 SLC4A1P02730 911 aa14.88□□□□□ -0.03
SNF8-203ENST00000504000 DIO3P55073 304 aa14.88□□□□□ -0.03
SNF8-203ENST00000504000 ERVK-8P63133 956 aa14.88□□□□□ -0.03
SNF8-203ENST00000504000 RAD51Q06609 339 aa14.88□□□□□ -0.03
SNF8-203ENST00000504000 SERINC3Q13530 473 aa14.88□□□□□ -0.03
SNF8-203ENST00000504000 SPIDRQ14159 915 aa14.88□□□□□ -0.03
SNF8-203ENST00000504000 RIMKLAQ8IXN7 391 aa14.88□□□□□ -0.03
SNF8-203ENST00000504000 KIAA2013Q8IYS2 634 aa14.88□□□□□ -0.03
SNF8-203ENST00000504000 RYBPQ8N488 228 aaPredicted RBP14.88□□□□□ -0.03
SNF8-203ENST00000504000 NKAPQ8N5F7 415 aaKnown RBP14.88□□□□□ -0.03
SNF8-203ENST00000504000 AADATQ8N5Z0 425 aa14.88□□□□□ -0.03
SNF8-203ENST00000504000 ATP6V0D2Q8N8Y2 350 aa14.88□□□□□ -0.03
SNF8-203ENST00000504000 PDPRQ8NCN5 879 aa14.88□□□□□ -0.03
SNF8-203ENST00000504000 BTN2A3PQ96KV6 586 aa14.88□□□□□ -0.03
SNF8-203ENST00000504000 KCNA7Q96RP8 456 aa14.88□□□□□ -0.03
SNF8-203ENST00000504000 RIC8BQ9NVN3 520 aa14.88□□□□□ -0.03
SNF8-203ENST00000504000 RHBDL2Q9NX52 303 aa14.88□□□□□ -0.03
SNF8-203ENST00000504000 MAGEL2Q9UJ55 1249 aa14.88□□□□□ -0.03
SNF8-203ENST00000504000 RNF112Q9ULX5 631 aa14.88□□□□□ -0.03
SNF8-203ENST00000504000 KCTD3Q9Y597 815 aa14.88□□□□□ -0.03
SNF8-203ENST00000504000 PCDHB3Q9Y5E6 796 aa14.88□□□□□ -0.03
SNF8-203ENST00000504000 ANKRD36A6QL64 1941 aa14.87□□□□□ -0.03
SNF8-203ENST00000504000 IQCA1LA6NCM1 817 aa14.87□□□□□ -0.03
SNF8-203ENST00000504000 ARNTLO00327 626 aa14.87□□□□□ -0.03
SNF8-203ENST00000504000 TPST1O60507 370 aa14.87□□□□□ -0.03
SNF8-203ENST00000504000 CDH1P12830 882 aa14.87□□□□□ -0.03
SNF8-203ENST00000504000 CHRM3P20309 590 aa14.87□□□□□ -0.03
SNF8-203ENST00000504000 POLR2JP52435 117 aaKnown RBP14.87□□□□□ -0.03
SNF8-203ENST00000504000 SEMA3AQ14563 771 aa14.87□□□□□ -0.03
SNF8-203ENST00000504000 C16orf72Q14CZ0 275 aa14.87□□□□□ -0.03
SNF8-203ENST00000504000 MOGQ16653 247 aa14.87□□□□□ -0.03
SNF8-203ENST00000504000 PAGE3Q5JUK9 113 aa14.87□□□□□ -0.03
SNF8-203ENST00000504000 NANOGP8Q6NSW7 305 aa14.87□□□□□ -0.03
SNF8-203ENST00000504000 DUS1LQ6P1R4 473 aaKnown RBP14.87□□□□□ -0.03
SNF8-203ENST00000504000 KCTD8Q6ZWB6 473 aa14.87□□□□□ -0.03
SNF8-203ENST00000504000 HID1Q8IV36 788 aa14.87□□□□□ -0.03
SNF8-203ENST00000504000 SPNS2Q8IVW8 549 aa14.87□□□□□ -0.03
SNF8-203ENST00000504000 PNPLA1Q8N8W4 532 aa14.87□□□□□ -0.03
SNF8-203ENST00000504000 DNAJB14Q8TBM8 379 aa14.87□□□□□ -0.03
SNF8-203ENST00000504000 EXT2Q93063 718 aa14.87□□□□□ -0.03
SNF8-203ENST00000504000 CDKN2AIPNLQ96HQ2 116 aa14.87□□□□□ -0.03
SNF8-203ENST00000504000 FUBP3Q96I24 572 aaKnown RBP eCLIP14.87□□□□□ -0.03
SNF8-203ENST00000504000 FBXL20Q96IG2 436 aa14.87□□□□□ -0.03
SNF8-203ENST00000504000 C8orf48Q96LL4 319 aa14.87□□□□□ -0.03
SNF8-203ENST00000504000 SLC30A3Q99726 388 aa14.87□□□□□ -0.03
SNF8-203ENST00000504000 NANOGQ9H9S0 305 aa14.87□□□□□ -0.03
SNF8-203ENST00000504000 POLR1BQ9H9Y6 1135 aa14.87□□□□□ -0.03
SNF8-203ENST00000504000 NLE1Q9NVX2 485 aaPredicted RBP14.87□□□□□ -0.03
SNF8-203ENST00000504000 IL37Q9NZH6 218 aa14.87□□□□□ -0.03
SNF8-203ENST00000504000 GIMAP2Q9UG22 337 aa14.87□□□□□ -0.03
SNF8-203ENST00000504000 SUN2Q9UH99 717 aa14.87□□□□□ -0.03
SNF8-203ENST00000504000 VPS9D1Q9Y2B5 631 aa14.87□□□□□ -0.03
SNF8-203ENST00000504000 MED16Q9Y2X0 877 aa14.87□□□□□ -0.03
SNF8-203ENST00000504000 SLC30A1Q9Y6M5 507 aa14.87□□□□□ -0.03
SNF8-203ENST00000504000 hCG_2014768A0A024R1R8 64 aa14.86□□□□□ -0.03
SNF8-203ENST00000504000 LRRC14BA6NHZ5 514 aa14.86□□□□□ -0.03
SNF8-203ENST00000504000 CCL22O00626 93 aa14.86□□□□□ -0.03
SNF8-203ENST00000504000 ZSCAN9O15535 394 aaPredicted RBP14.86□□□□□ -0.03
SNF8-203ENST00000504000 SNX2O60749 519 aa14.86□□□□□ -0.03
SNF8-203ENST00000504000 RAMP2O60895 175 aa14.86□□□□□ -0.03
SNF8-203ENST00000504000 CRCPO75575 148 aa14.86□□□□□ -0.03
SNF8-203ENST00000504000 HPRP00739 348 aa14.86□□□□□ -0.03
SNF8-203ENST00000504000 RPL10P27635 214 aaKnown RBP14.86□□□□□ -0.03
SNF8-203ENST00000504000 MAPKAPK2P49137 400 aa14.86□□□□□ -0.03
SNF8-203ENST00000504000 YBX1P67809 324 aaKnown RBP14.86□□□□□ -0.03
SNF8-203ENST00000504000 POLD3Q15054 466 aaPredicted RBP14.86□□□□□ -0.03
SNF8-203ENST00000504000 EML3Q32P44 896 aa14.86□□□□□ -0.03
SNF8-203ENST00000504000 SETMARQ53H47 684 aaPredicted RBP14.86□□□□□ -0.03
SNF8-203ENST00000504000 ALFQ53S48 1182 aa14.86□□□□□ -0.03
SNF8-203ENST00000504000 RABL3Q5HYI8 236 aa14.86□□□□□ -0.03
SNF8-203ENST00000504000 ZNF773Q6PK81 442 aa14.86□□□□□ -0.03
SNF8-203ENST00000504000 TFAP2DQ7Z6R9 452 aa14.86□□□□□ -0.03
SNF8-203ENST00000504000 SFRP1Q8N474 314 aa14.86□□□□□ -0.03
SNF8-203ENST00000504000 OR13F1Q8NGS4 319 aa14.86□□□□□ -0.03
SNF8-203ENST00000504000 TBC1D15Q8TC07 691 aa14.86□□□□□ -0.03
SNF8-203ENST00000504000 ABTB1Q969K4 478 aaPredicted RBP14.86□□□□□ -0.03
SNF8-203ENST00000504000 FUBP1Q96AE4 644 aaKnown RBP14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms