RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 GLUD1P00367 558 aa2.43□□□□□ -2.02
HMGB1P35-201ENST00000503360 EGFP01133 1207 aa2.43□□□□□ -2.02
HMGB1P35-201ENST00000503360 HIST1H2ABP04908 130 aa2.43□□□□□ -2.02
HMGB1P35-201ENST00000503360 PRSS2P07478 247 aa2.43□□□□□ -2.02
HMGB1P35-201ENST00000503360 ANXA7P20073 488 aaKnown RBP2.43□□□□□ -2.02
HMGB1P35-201ENST00000503360 HIST1H2ADP20671 130 aa2.43□□□□□ -2.02
HMGB1P35-201ENST00000503360 UBA1P22314 1058 aaKnown RBP2.43□□□□□ -2.02
HMGB1P35-201ENST00000503360 ITGB8P26012 769 aa2.43□□□□□ -2.02
HMGB1P35-201ENST00000503360 PON1P27169 355 aa2.43□□□□□ -2.02
HMGB1P35-201ENST00000503360 BDKRB2P30411 391 aa2.43□□□□□ -2.02
HMGB1P35-201ENST00000503360 SSTR2P30874 369 aa2.43□□□□□ -2.02
HMGB1P35-201ENST00000503360 HOXA13P31271 388 aaPredicted RBP2.43□□□□□ -2.02
HMGB1P35-201ENST00000503360 HOXC9P31274 260 aa2.43□□□□□ -2.02
HMGB1P35-201ENST00000503360 EIF2DP41214 584 aaKnown RBP2.43□□□□□ -2.02
HMGB1P35-201ENST00000503360 RAD52P43351 418 aa2.43□□□□□ -2.02
HMGB1P35-201ENST00000503360 SLC15A1P46059 708 aa2.43□□□□□ -2.02
HMGB1P35-201ENST00000503360 GLUD2P49448 558 aa2.43□□□□□ -2.02
HMGB1P35-201ENST00000503360 MFAP4P55083 255 aa2.43□□□□□ -2.02
HMGB1P35-201ENST00000503360 TAS2R40P59535 323 aa2.43□□□□□ -2.02
HMGB1P35-201ENST00000503360 PSMC6P62333 389 aa2.43□□□□□ -2.02
HMGB1P35-201ENST00000503360 CSNK2A1P68400 391 aaPredicted RBP2.43□□□□□ -2.02
HMGB1P35-201ENST00000503360 MRPS34P82930 218 aaKnown RBP2.43□□□□□ -2.02
HMGB1P35-201ENST00000503360 CRYZQ08257 329 aaKnown RBP2.43□□□□□ -2.02
HMGB1P35-201ENST00000503360 LRMPQ12912 555 aa2.43□□□□□ -2.02
HMGB1P35-201ENST00000503360 CDC16Q13042 620 aa2.43□□□□□ -2.02
HMGB1P35-201ENST00000503360 STK4Q13043 487 aa2.43□□□□□ -2.02
HMGB1P35-201ENST00000503360 TRAF3Q13114 568 aa2.43□□□□□ -2.02
HMGB1P35-201ENST00000503360 PLCB4Q15147 1175 aa2.43□□□□□ -2.02
HMGB1P35-201ENST00000503360 CCDC6Q16204 474 aa2.43□□□□□ -2.02
HMGB1P35-201ENST00000503360 CDC37Q16543 378 aaPredicted RBP2.43□□□□□ -2.02
HMGB1P35-201ENST00000503360 CTF1Q16619 201 aa2.43□□□□□ -2.02
HMGB1P35-201ENST00000503360 MRGPRG-AS1Q2M3A8 158 aa2.43□□□□□ -2.02
HMGB1P35-201ENST00000503360 PCGF3Q3KNV8 242 aa2.43□□□□□ -2.02
HMGB1P35-201ENST00000503360 AMZ1Q400G9 498 aa2.43□□□□□ -2.02
HMGB1P35-201ENST00000503360 EFHC1Q5JVL4 640 aa2.43□□□□□ -2.02
HMGB1P35-201ENST00000503360 PAPPA-AS1Q5QFB9 102 aa2.43□□□□□ -2.02
HMGB1P35-201ENST00000503360 C1QTNF12Q5T7M4 302 aa2.43□□□□□ -2.02
HMGB1P35-201ENST00000503360 TMEM198Q66K66 360 aa2.43□□□□□ -2.02
HMGB1P35-201ENST00000503360 DUS1LQ6P1R4 473 aaKnown RBP2.43□□□□□ -2.02
HMGB1P35-201ENST00000503360 C8orf82Q6P1X6 216 aaPredicted RBP2.43□□□□□ -2.02
HMGB1P35-201ENST00000503360 WDR73Q6P4I2 378 aa2.43□□□□□ -2.02
HMGB1P35-201ENST00000503360 KCTD18Q6PI47 426 aaPredicted RBP2.43□□□□□ -2.02
HMGB1P35-201ENST00000503360 KRTAP5-2Q701N4 177 aa2.43□□□□□ -2.02
HMGB1P35-201ENST00000503360 HIST3H2AQ7L7L0 130 aa2.43□□□□□ -2.02
HMGB1P35-201ENST00000503360 SDCCAG8Q86SQ7 713 aaPredicted RBP2.43□□□□□ -2.02
HMGB1P35-201ENST00000503360 FOXRED2Q8IWF2 684 aa2.43□□□□□ -2.02
HMGB1P35-201ENST00000503360 SPEM1Q8N4L4 309 aa2.43□□□□□ -2.02
HMGB1P35-201ENST00000503360 NKAIN3Q8N8D7 197 aa2.43□□□□□ -2.02
HMGB1P35-201ENST00000503360 CSNK2A3Q8NEV1 391 aa2.43□□□□□ -2.02
HMGB1P35-201ENST00000503360 ORAI1Q96D31 301 aa2.43□□□□□ -2.02
HMGB1P35-201ENST00000503360 GRAMD2BQ96HH9 432 aa2.43□□□□□ -2.02
HMGB1P35-201ENST00000503360 FEM1CQ96JP0 617 aa2.43□□□□□ -2.02
HMGB1P35-201ENST00000503360 EGLN2Q96KS0 407 aa2.43□□□□□ -2.02
HMGB1P35-201ENST00000503360 GAD1Q99259 594 aa2.43□□□□□ -2.02
HMGB1P35-201ENST00000503360 AP1M1Q9BXS5 423 aa2.43□□□□□ -2.02
HMGB1P35-201ENST00000503360 PIGMQ9H3S5 423 aa2.43□□□□□ -2.02
HMGB1P35-201ENST00000503360 C17orf75Q9HAS0 396 aa2.43□□□□□ -2.02
HMGB1P35-201ENST00000503360 SEBOXQ9HB31 216 aaPredicted RBP2.43□□□□□ -2.02
HMGB1P35-201ENST00000503360 LTB4R2Q9NPC1 389 aa2.43□□□□□ -2.02
HMGB1P35-201ENST00000503360 NOX4Q9NPH5 578 aa2.43□□□□□ -2.02
HMGB1P35-201ENST00000503360 SH3GLB2Q9NR46 395 aa2.43□□□□□ -2.02
HMGB1P35-201ENST00000503360 ANKEF1Q9NU02 776 aa2.43□□□□□ -2.02
HMGB1P35-201ENST00000503360 MTMR10Q9NXD2 777 aa2.43□□□□□ -2.02
HMGB1P35-201ENST00000503360 COPG2Q9UBF2 871 aa2.43□□□□□ -2.02
HMGB1P35-201ENST00000503360 OR14J1Q9UGF5 321 aa2.43□□□□□ -2.02
HMGB1P35-201ENST00000503360 CMAHPQ9Y471 501 aa2.43□□□□□ -2.02
HMGB1P35-201ENST00000503360 SNX8Q9Y5X2 465 aa2.43□□□□□ -2.02
HMGB1P35-201ENST00000503360 A0A0U1RQJ8 604 aa2.42□□□□□ -2.02
HMGB1P35-201ENST00000503360 CLEC18AA5D8T8 446 aa2.42□□□□□ -2.02
HMGB1P35-201ENST00000503360 A8MV72 311 aaPredicted RBP2.42□□□□□ -2.02
HMGB1P35-201ENST00000503360 OGG1O15527 345 aa2.42□□□□□ -2.02
HMGB1P35-201ENST00000503360 PLRG1O43660 514 aaKnown RBP2.42□□□□□ -2.02
HMGB1P35-201ENST00000503360 PLOD3O60568 738 aa2.42□□□□□ -2.02
HMGB1P35-201ENST00000503360 ENTPD3O75355 529 aa2.42□□□□□ -2.02
HMGB1P35-201ENST00000503360 KCNK5O95279 499 aa2.42□□□□□ -2.02
HMGB1P35-201ENST00000503360 PGM3O95394 542 aa2.42□□□□□ -2.02
HMGB1P35-201ENST00000503360 ICAM1P05362 532 aa2.42□□□□□ -2.02
HMGB1P35-201ENST00000503360 TUBBP07437 444 aa2.42□□□□□ -2.02
HMGB1P35-201ENST00000503360 ACTN1P12814 892 aa2.42□□□□□ -2.02
HMGB1P35-201ENST00000503360 SELLP14151 372 aa2.42□□□□□ -2.02
HMGB1P35-201ENST00000503360 AKR1B1P15121 316 aa2.42□□□□□ -2.02
HMGB1P35-201ENST00000503360 SAT1P21673 171 aa2.42□□□□□ -2.02
HMGB1P35-201ENST00000503360 ACADLP28330 430 aa2.42□□□□□ -2.02
HMGB1P35-201ENST00000503360 HNRNPH2P55795 449 aaKnown RBP2.42□□□□□ -2.02
HMGB1P35-201ENST00000503360 IFI35P80217 286 aaPredicted RBP2.42□□□□□ -2.02
HMGB1P35-201ENST00000503360 MRPS5P82675 430 aaKnown RBP2.42□□□□□ -2.02
HMGB1P35-201ENST00000503360 BNC1Q01954 994 aa2.42□□□□□ -2.02
HMGB1P35-201ENST00000503360 FOXM1Q08050 763 aa2.42□□□□□ -2.02
HMGB1P35-201ENST00000503360 TRAF2Q12933 501 aa2.42□□□□□ -2.02
HMGB1P35-201ENST00000503360 DHX34Q14147 1143 aaKnown RBP2.42□□□□□ -2.02
HMGB1P35-201ENST00000503360 CCDC184Q52MB2 194 aa2.42□□□□□ -2.02
HMGB1P35-201ENST00000503360 ZNF805Q5CZA5 627 aa2.42□□□□□ -2.02
HMGB1P35-201ENST00000503360 XKR9Q5GH70 373 aa2.42□□□□□ -2.02
HMGB1P35-201ENST00000503360 DCST1Q5T197 706 aa2.42□□□□□ -2.02
HMGB1P35-201ENST00000503360 MFSD4BQ5TF39 518 aa2.42□□□□□ -2.02
HMGB1P35-201ENST00000503360 FAM69BQ5VUD6 431 aa2.42□□□□□ -2.02
HMGB1P35-201ENST00000503360 TSPAN33Q86UF1 283 aa2.42□□□□□ -2.02
HMGB1P35-201ENST00000503360 HACE1Q8IYU2 909 aa2.42□□□□□ -2.02
HMGB1P35-201ENST00000503360 CNPY4Q8N129 248 aa2.42□□□□□ -2.02
HMGB1P35-201ENST00000503360 BEST3Q8N1M1 668 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms