RNA–Protein interactions for RNA: ENST00000503215.5

SCLT1-204, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,364 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-204ENST00000503215 TK2O00142 265 aa16.09■□□□□ 0.17
SCLT1-204ENST00000503215 SNX2O60749 519 aa16.09■□□□□ 0.17
SCLT1-204ENST00000503215 FGF3P11487 239 aaPredicted RBP16.09■□□□□ 0.17
SCLT1-204ENST00000503215 WT1P19544 449 aaPredicted RBP16.09■□□□□ 0.17
SCLT1-204ENST00000503215 LY6DQ14210 128 aa16.09■□□□□ 0.17
SCLT1-204ENST00000503215 KHDC1Q4VXA5 237 aaKnown RBP16.09■□□□□ 0.17
SCLT1-204ENST00000503215 TAF1BQ53T94 588 aaPredicted RBP16.09■□□□□ 0.17
SCLT1-204ENST00000503215 CCDC81Q6ZN84 652 aa16.09■□□□□ 0.17
SCLT1-204ENST00000503215 VASH2Q86V25 355 aa16.09■□□□□ 0.17
SCLT1-204ENST00000503215 RAVER1Q8IY67 606 aaKnown RBP16.09■□□□□ 0.17
SCLT1-204ENST00000503215 ZNF843Q8N446 348 aa16.09■□□□□ 0.17
SCLT1-204ENST00000503215 KRT35Q92764 455 aa16.09■□□□□ 0.17
SCLT1-204ENST00000503215 HAUS1Q96CS2 278 aa16.09■□□□□ 0.17
SCLT1-204ENST00000503215 TEKT5Q96M29 485 aa16.09■□□□□ 0.17
SCLT1-204ENST00000503215 CCNL2Q96S94 520 aaPredicted RBP16.09■□□□□ 0.17
SCLT1-204ENST00000503215 SPATA16Q9BXB7 569 aa16.09■□□□□ 0.17
SCLT1-204ENST00000503215 TRIM5Q9C035 493 aa16.09■□□□□ 0.17
SCLT1-204ENST00000503215 OR2AG1Q9H205 316 aa16.09■□□□□ 0.17
SCLT1-204ENST00000503215 C10orf88Q9H8K7 445 aa16.09■□□□□ 0.17
SCLT1-204ENST00000503215 MAGEE1Q9HCI5 957 aa16.09■□□□□ 0.17
SCLT1-204ENST00000503215 BPIFA1Q9NP55 256 aa16.09■□□□□ 0.17
SCLT1-204ENST00000503215 KCNK4Q9NYG8 393 aa16.09■□□□□ 0.17
SCLT1-204ENST00000503215 SLC23A2Q9UGH3 650 aa16.09■□□□□ 0.17
SCLT1-204ENST00000503215 ACSL6Q9UKU0 697 aa16.09■□□□□ 0.17
SCLT1-204ENST00000503215 PCDHA13Q9Y5I0 950 aa16.09■□□□□ 0.17
SCLT1-204ENST00000503215 ADGRG1Q9Y653 693 aa16.09■□□□□ 0.17
SCLT1-204ENST00000503215 ZFC3H1O60293 1989 aaKnown RBP16.08■□□□□ 0.17
SCLT1-204ENST00000503215 RGSL1A5PLK6 1076 aa16.08■□□□□ 0.16
SCLT1-204ENST00000503215 RCCD1A6NED2 376 aa16.08■□□□□ 0.16
SCLT1-204ENST00000503215 GRID2O43424 1007 aa16.08■□□□□ 0.16
SCLT1-204ENST00000503215 NUAK1O60285 661 aa16.08■□□□□ 0.16
SCLT1-204ENST00000503215 MTX2O75431 263 aa16.08■□□□□ 0.16
SCLT1-204ENST00000503215 NDST3O95803 873 aa16.08■□□□□ 0.16
SCLT1-204ENST00000503215 BPIP17213 487 aa16.08■□□□□ 0.16
SCLT1-204ENST00000503215 LIMK2P53671 638 aa16.08■□□□□ 0.16
SCLT1-204ENST00000503215 NFATC2Q13469 925 aa16.08■□□□□ 0.16
SCLT1-204ENST00000503215 LRP8Q14114 963 aa16.08■□□□□ 0.16
SCLT1-204ENST00000503215 ODF2Q5BJF6 829 aa16.08■□□□□ 0.16
SCLT1-204ENST00000503215 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.08■□□□□ 0.16
SCLT1-204ENST00000503215 IYDQ6PHW0 289 aa16.08■□□□□ 0.16
SCLT1-204ENST00000503215 SARM1Q6SZW1 724 aa16.08■□□□□ 0.16
SCLT1-204ENST00000503215 KDELC1Q6UW63 502 aa16.08■□□□□ 0.16
SCLT1-204ENST00000503215 ADGRG6Q86SQ4 1221 aa16.08■□□□□ 0.16
SCLT1-204ENST00000503215 ZC3H18Q86VM9 953 aaKnown RBP16.08■□□□□ 0.16
SCLT1-204ENST00000503215 TFB1MQ8WVM0 346 aaKnown RBP16.08■□□□□ 0.16
SCLT1-204ENST00000503215 JPH3Q8WXH2 748 aaPredicted RBP16.08■□□□□ 0.16
SCLT1-204ENST00000503215 TMEM159Q96B96 161 aa16.08■□□□□ 0.16
SCLT1-204ENST00000503215 PRDM8Q9NQV8 689 aa16.08■□□□□ 0.16
SCLT1-204ENST00000503215 A0A0A6YYK5 440 aaPredicted RBP16.07■□□□□ 0.16
SCLT1-204ENST00000503215 ERVH48-1M5A8F1 160 aa16.07■□□□□ 0.16
SCLT1-204ENST00000503215 PSTPIP1O43586 416 aa16.07■□□□□ 0.16
SCLT1-204ENST00000503215 SLC25A14O95258 325 aaPredicted RBP16.07■□□□□ 0.16
SCLT1-204ENST00000503215 LCA5LO95447 670 aa16.07■□□□□ 0.16
SCLT1-204ENST00000503215 NFKB1P19838 968 aa16.07■□□□□ 0.16
SCLT1-204ENST00000503215 CHRNA4P43681 627 aa16.07■□□□□ 0.16
SCLT1-204ENST00000503215 FASLGP48023 281 aa16.07■□□□□ 0.16
SCLT1-204ENST00000503215 HADHBP55084 474 aaKnown RBP16.07■□□□□ 0.16
SCLT1-204ENST00000503215 WNT3AP56704 352 aa16.07■□□□□ 0.16
SCLT1-204ENST00000503215 RHDQ02161 417 aa16.07■□□□□ 0.16
SCLT1-204ENST00000503215 C19orf57Q0VDD7 668 aa16.07■□□□□ 0.16
SCLT1-204ENST00000503215 SQSTM1Q13501 440 aa16.07■□□□□ 0.16
SCLT1-204ENST00000503215 TFDP2Q14188 446 aa16.07■□□□□ 0.16
SCLT1-204ENST00000503215 CRTC3Q6UUV7 619 aa16.07■□□□□ 0.16
SCLT1-204ENST00000503215 LSM14AQ8ND56 463 aaKnown RBP16.07■□□□□ 0.16
SCLT1-204ENST00000503215 OR4D9Q8NGE8 314 aa16.07■□□□□ 0.16
SCLT1-204ENST00000503215 OXNAD1Q96HP4 312 aaPredicted RBP16.07■□□□□ 0.16
SCLT1-204ENST00000503215 SLC38A3Q99624 504 aa16.07■□□□□ 0.16
SCLT1-204ENST00000503215 HERPUD2Q9BSE4 406 aa16.07■□□□□ 0.16
SCLT1-204ENST00000503215 HEMGNQ9BXL5 484 aa16.07■□□□□ 0.16
SCLT1-204ENST00000503215 GPR63Q9BZJ6 419 aa16.07■□□□□ 0.16
SCLT1-204ENST00000503215 OCIAD1Q9NX40 245 aa16.07■□□□□ 0.16
SCLT1-204ENST00000503215 SCHIP1Q9P0W5 487 aaPredicted RBP16.07■□□□□ 0.16
SCLT1-204ENST00000503215 PIEZO2Q9H5I5 2752 aa16.07■□□□□ 0.16
SCLT1-204ENST00000503215 GCN1Q92616 2671 aaKnown RBP16.06■□□□□ 0.16
SCLT1-204ENST00000503215 hCG_1818297A0A087WSY0 165 aa16.06■□□□□ 0.16
SCLT1-204ENST00000503215 THRAP10827 490 aa16.06■□□□□ 0.16
SCLT1-204ENST00000503215 CA5AP35218 305 aa16.06■□□□□ 0.16
SCLT1-204ENST00000503215 NR2C2P49116 596 aa16.06■□□□□ 0.16
SCLT1-204ENST00000503215 HHEXQ03014 270 aa16.06■□□□□ 0.16
SCLT1-204ENST00000503215 PEX6Q13608 980 aa16.06■□□□□ 0.16
SCLT1-204ENST00000503215 PLA2G4EQ3MJ16 856 aa16.06■□□□□ 0.16
SCLT1-204ENST00000503215 GLIPR1L2Q4G1C9 344 aa16.06■□□□□ 0.16
SCLT1-204ENST00000503215 ZNF569Q5MCW4 686 aa16.06■□□□□ 0.16
SCLT1-204ENST00000503215 SNAP47Q5SQN1 464 aa16.06■□□□□ 0.16
SCLT1-204ENST00000503215 DTX1Q86Y01 620 aa16.06■□□□□ 0.16
SCLT1-204ENST00000503215 KATNAL2Q8IYT4 538 aa16.06■□□□□ 0.16
SCLT1-204ENST00000503215 ZNF567Q8N184 647 aa16.06■□□□□ 0.16
SCLT1-204ENST00000503215 SLC25A41Q8N5S1 370 aa16.06■□□□□ 0.16
SCLT1-204ENST00000503215 GLYATL1Q969I3 302 aa16.06■□□□□ 0.16
SCLT1-204ENST00000503215 CARD9Q9H257 536 aa16.06■□□□□ 0.16
SCLT1-204ENST00000503215 RMI1Q9H9A7 625 aa16.06■□□□□ 0.16
SCLT1-204ENST00000503215 TRIM39Q9HCM9 518 aa16.06■□□□□ 0.16
SCLT1-204ENST00000503215 DUSP10Q9Y6W6 482 aa16.06■□□□□ 0.16
SCLT1-204ENST00000503215 HELZ2Q9BYK8 2649 aaKnown RBP16.05■□□□□ 0.16
SCLT1-204ENST00000503215 LOC285095A0A1B0GVY8 99 aa16.05■□□□□ 0.16
SCLT1-204ENST00000503215 A8MU76 341 aa16.05■□□□□ 0.16
SCLT1-204ENST00000503215 HGSO14964 777 aaPredicted RBP16.05■□□□□ 0.16
SCLT1-204ENST00000503215 ZRANB2O95218 330 aaKnown RBP eCLIP16.05■□□□□ 0.16
SCLT1-204ENST00000503215 LIPCP11150 499 aa16.05■□□□□ 0.16
SCLT1-204ENST00000503215 DCDC1P59894 354 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms