RNA–Protein interactions for RNA: ENST00000497722.2

PSPC1-205, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-205ENST00000497722 PCDH20Q8N6Y1 951 aaKnown RBP3.24□□□□□ -1.89
PSPC1-205ENST00000497722 OR1J2Q8NGS2 313 aa3.24□□□□□ -1.89
PSPC1-205ENST00000497722 LILRB1Q8NHL6 650 aaPredicted RBP3.24□□□□□ -1.89
PSPC1-205ENST00000497722 SECTM1Q8WVN6 248 aa3.24□□□□□ -1.89
PSPC1-205ENST00000497722 APBB2Q92870 758 aa3.24□□□□□ -1.89
PSPC1-205ENST00000497722 CDCA5Q96FF9 252 aa3.24□□□□□ -1.89
PSPC1-205ENST00000497722 BICD1Q96G01 975 aa3.24□□□□□ -1.89
PSPC1-205ENST00000497722 SMC6Q96SB8 1091 aa3.24□□□□□ -1.89
PSPC1-205ENST00000497722 PLK3Q9H4B4 646 aa3.24□□□□□ -1.89
PSPC1-205ENST00000497722 GAREM1Q9H706 876 aa3.24□□□□□ -1.89
PSPC1-205ENST00000497722 ZNF224Q9NZL3 707 aa3.24□□□□□ -1.89
PSPC1-205ENST00000497722 ABI3Q9P2A4 366 aa3.24□□□□□ -1.89
PSPC1-205ENST00000497722 COPG2Q9UBF2 871 aa3.24□□□□□ -1.89
PSPC1-205ENST00000497722 TINAGQ9UJW2 476 aa3.24□□□□□ -1.89
PSPC1-205ENST00000497722 FBXW11Q9UKB1 542 aa3.24□□□□□ -1.89
PSPC1-205ENST00000497722 PADI1Q9ULC6 663 aa3.24□□□□□ -1.89
PSPC1-205ENST00000497722 OGG1O15527 345 aa3.23□□□□□ -1.89
PSPC1-205ENST00000497722 LDB3O75112 727 aa3.23□□□□□ -1.89
PSPC1-205ENST00000497722 RFPL2O75678 378 aa3.23□□□□□ -1.89
PSPC1-205ENST00000497722 TPPPO94811 219 aa3.23□□□□□ -1.89
PSPC1-205ENST00000497722 PMS2P2O95744 297 aa3.23□□□□□ -1.89
PSPC1-205ENST00000497722 FTCDO95954 541 aa3.23□□□□□ -1.89
PSPC1-205ENST00000497722 AFPP02771 609 aaKnown RBP3.23□□□□□ -1.89
PSPC1-205ENST00000497722 POLR2CP19387 275 aaPredicted RBP3.23□□□□□ -1.89
PSPC1-205ENST00000497722 GCH1P30793 250 aa3.23□□□□□ -1.89
PSPC1-205ENST00000497722 CAMPP49913 170 aa3.23□□□□□ -1.89
PSPC1-205ENST00000497722 TERF1P54274 439 aa3.23□□□□□ -1.89
PSPC1-205ENST00000497722 EIF5P55010 431 aaKnown RBP3.23□□□□□ -1.89
PSPC1-205ENST00000497722 TAS2R38P59533 333 aa3.23□□□□□ -1.89
PSPC1-205ENST00000497722 TAS2R40P59535 323 aa3.23□□□□□ -1.89
PSPC1-205ENST00000497722 MYLK3Q32MK0 819 aa3.23□□□□□ -1.89
PSPC1-205ENST00000497722 FRG2Q64ET8 278 aa3.23□□□□□ -1.89
PSPC1-205ENST00000497722 PLEKHA7Q6IQ23 1121 aa3.23□□□□□ -1.89
PSPC1-205ENST00000497722 MZT2BQ6NZ67 158 aa3.23□□□□□ -1.89
PSPC1-205ENST00000497722 EXOC3L1Q86VI1 746 aa3.23□□□□□ -1.89
PSPC1-205ENST00000497722 HACE1Q8IYU2 909 aa3.23□□□□□ -1.89
PSPC1-205ENST00000497722 RNF113BQ8IZP6 322 aaKnown RBP3.23□□□□□ -1.89
PSPC1-205ENST00000497722 GSDMBQ8TAX9 411 aa3.23□□□□□ -1.89
PSPC1-205ENST00000497722 HMGCLL1Q8TB92 370 aa3.23□□□□□ -1.89
PSPC1-205ENST00000497722 HM13Q8TCT9 377 aa3.23□□□□□ -1.89
PSPC1-205ENST00000497722 UTP15Q8TED0 518 aaKnown RBP3.23□□□□□ -1.89
PSPC1-205ENST00000497722 FIG4Q92562 907 aa3.23□□□□□ -1.89
PSPC1-205ENST00000497722 GRAMD2BQ96HH9 432 aa3.23□□□□□ -1.89
PSPC1-205ENST00000497722 GAD1Q99259 594 aa3.23□□□□□ -1.89
PSPC1-205ENST00000497722 SEPT5Q99719 369 aaPredicted RBP3.23□□□□□ -1.89
PSPC1-205ENST00000497722 C1QTNF1Q9BXJ1 281 aa3.23□□□□□ -1.89
PSPC1-205ENST00000497722 PIGMQ9H3S5 423 aa3.23□□□□□ -1.89
PSPC1-205ENST00000497722 SEBOXQ9HB31 216 aaPredicted RBP3.23□□□□□ -1.89
PSPC1-205ENST00000497722 MCM9Q9NXL9 1143 aa3.23□□□□□ -1.89
PSPC1-205ENST00000497722 OGFRQ9NZT2 677 aa3.23□□□□□ -1.89
PSPC1-205ENST00000497722 ADD3Q9UEY8 706 aaKnown RBP3.23□□□□□ -1.89
PSPC1-205ENST00000497722 DBNLQ9UJU6 430 aaKnown RBP3.23□□□□□ -1.89
PSPC1-205ENST00000497722 ICAM5Q9UMF0 924 aa3.23□□□□□ -1.89
PSPC1-205ENST00000497722 NENFQ9UMX5 172 aa3.23□□□□□ -1.89
PSPC1-205ENST00000497722 TMEM5Q9Y2B1 443 aa3.23□□□□□ -1.89
PSPC1-205ENST00000497722 RUSC2Q8N2Y8 1516 aa3.23□□□□□ -1.89
PSPC1-205ENST00000497722 FRMD3A2A2Y4 597 aa3.22□□□□□ -1.89
PSPC1-205ENST00000497722 CPED1A4D0V7 1026 aa3.22□□□□□ -1.89
PSPC1-205ENST00000497722 MAGEA13PA6NCF6 341 aa3.22□□□□□ -1.89
PSPC1-205ENST00000497722 LRRC72A6NJI9 287 aa3.22□□□□□ -1.89
PSPC1-205ENST00000497722 DVL1O14640 695 aa3.22□□□□□ -1.89
PSPC1-205ENST00000497722 DOK2O60496 412 aa3.22□□□□□ -1.89
PSPC1-205ENST00000497722 PTP4A3O75365 173 aa3.22□□□□□ -1.89
PSPC1-205ENST00000497722 KRT36O76013 467 aa3.22□□□□□ -1.89
PSPC1-205ENST00000497722 KCNK5O95279 499 aa3.22□□□□□ -1.89
PSPC1-205ENST00000497722 SNRNP70P08621 437 aaKnown RBP3.22□□□□□ -1.89
PSPC1-205ENST00000497722 MAPK4P31152 587 aa3.22□□□□□ -1.89
PSPC1-205ENST00000497722 USP8P40818 1118 aa3.22□□□□□ -1.89
PSPC1-205ENST00000497722 HADHAP40939 763 aa3.22□□□□□ -1.89
PSPC1-205ENST00000497722 MSH2P43246 934 aa3.22□□□□□ -1.89
PSPC1-205ENST00000497722 DVL1P1P54792 670 aaPredicted RBP3.22□□□□□ -1.89
PSPC1-205ENST00000497722 MFAP4P55083 255 aa3.22□□□□□ -1.89
PSPC1-205ENST00000497722 ZNF155Q12901 538 aaPredicted RBP3.22□□□□□ -1.89
PSPC1-205ENST00000497722 ZRSR1Q15695 479 aaKnown RBP3.22□□□□□ -1.89
PSPC1-205ENST00000497722 ZNF718Q3SXZ3 478 aa3.22□□□□□ -1.89
PSPC1-205ENST00000497722 ZNF672Q499Z4 452 aaPredicted RBP3.22□□□□□ -1.89
PSPC1-205ENST00000497722 ZNF805Q5CZA5 627 aa3.22□□□□□ -1.89
PSPC1-205ENST00000497722 LRIF1Q5T3J3 769 aa3.22□□□□□ -1.89
PSPC1-205ENST00000497722 FAM69BQ5VUD6 431 aa3.22□□□□□ -1.89
PSPC1-205ENST00000497722 WBP2NLQ6ICG8 309 aa3.22□□□□□ -1.89
PSPC1-205ENST00000497722 FASTKD5Q7L8L6 764 aaKnown RBP3.22□□□□□ -1.89
PSPC1-205ENST00000497722 EPHX4Q8IUS5 362 aa3.22□□□□□ -1.89
PSPC1-205ENST00000497722 ARID3BQ8IVW6 561 aaPredicted RBP3.22□□□□□ -1.89
PSPC1-205ENST00000497722 MAP7D3Q8IWC1 876 aa3.22□□□□□ -1.89
PSPC1-205ENST00000497722 ODF3L1Q8IXM7 274 aa3.22□□□□□ -1.89
PSPC1-205ENST00000497722 ADGRF2Q8IZF7 708 aa3.22□□□□□ -1.89
PSPC1-205ENST00000497722 MUC20Q8N307 709 aaPredicted RBP3.22□□□□□ -1.89
PSPC1-205ENST00000497722 RFLNBQ8N5W9 214 aa3.22□□□□□ -1.89
PSPC1-205ENST00000497722 EMC1Q8N766 993 aa3.22□□□□□ -1.89
PSPC1-205ENST00000497722 MAB21L3Q8N8X9 362 aa3.22□□□□□ -1.89
PSPC1-205ENST00000497722 MCUQ8NE86 351 aa3.22□□□□□ -1.89
PSPC1-205ENST00000497722 FAM120BQ96EK7 910 aaKnown RBP3.22□□□□□ -1.89
PSPC1-205ENST00000497722 PGAM5Q96HS1 289 aa3.22□□□□□ -1.89
PSPC1-205ENST00000497722 FEM1CQ96JP0 617 aa3.22□□□□□ -1.89
PSPC1-205ENST00000497722 TREX2Q9BQ50 279 aaPredicted RBP3.22□□□□□ -1.89
PSPC1-205ENST00000497722 NUDT16L1Q9BRJ7 211 aaKnown RBP3.22□□□□□ -1.89
PSPC1-205ENST00000497722 TMEM39BQ9GZU3 492 aa3.22□□□□□ -1.89
PSPC1-205ENST00000497722 CCDC68Q9H2F9 335 aa3.22□□□□□ -1.89
PSPC1-205ENST00000497722 PDZD7Q9H5P4 517 aa3.22□□□□□ -1.89
PSPC1-205ENST00000497722 DNAJC18Q9H819 358 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms