RNA–Protein interactions for RNA: ENST00000497251.1

TRAPPC3-207, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 715 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-207ENST00000497251 CYB5D1Q6P9G0 228 aa16.67■□□□□ 0.26
TRAPPC3-207ENST00000497251 RFLNAQ6ZTI6 216 aa16.67■□□□□ 0.26
TRAPPC3-207ENST00000497251 CHST15Q7LFX5 561 aaPredicted RBP16.67■□□□□ 0.26
TRAPPC3-207ENST00000497251 ESX1Q8N693 406 aa16.67■□□□□ 0.26
TRAPPC3-207ENST00000497251 KCTD6Q8NC69 237 aa16.67■□□□□ 0.26
TRAPPC3-207ENST00000497251 ARRDC2Q8TBH0 407 aa16.67■□□□□ 0.26
TRAPPC3-207ENST00000497251 APOBEC4Q8WW27 367 aaKnown RBP16.67■□□□□ 0.26
TRAPPC3-207ENST00000497251 NCSTNQ92542 709 aa16.67■□□□□ 0.26
TRAPPC3-207ENST00000497251 HDAC11Q96DB2 347 aa16.67■□□□□ 0.26
TRAPPC3-207ENST00000497251 ZNF830Q96NB3 372 aaPredicted RBP16.67■□□□□ 0.26
TRAPPC3-207ENST00000497251 TMEM9Q9P0T7 183 aa16.67■□□□□ 0.26
TRAPPC3-207ENST00000497251 NFKBIL1Q9UBC1 381 aaPredicted RBP16.67■□□□□ 0.26
TRAPPC3-207ENST00000497251 CPNE7Q9UBL6 633 aa16.67■□□□□ 0.26
TRAPPC3-207ENST00000497251 TBC1D29Q9UFV1 150 aa16.67■□□□□ 0.26
TRAPPC3-207ENST00000497251 C1orf232A0A0U1RR37 186 aa16.66■□□□□ 0.26
TRAPPC3-207ENST00000497251 ZNF487B1APH4 448 aa16.66■□□□□ 0.26
TRAPPC3-207ENST00000497251 POLR1CO15160 346 aaPredicted RBP16.66■□□□□ 0.26
TRAPPC3-207ENST00000497251 INPP4BO15327 924 aa16.66■□□□□ 0.26
TRAPPC3-207ENST00000497251 GRID2O43424 1007 aa16.66■□□□□ 0.26
TRAPPC3-207ENST00000497251 MFSD11O43934 449 aa16.66■□□□□ 0.26
TRAPPC3-207ENST00000497251 XRCC1P18887 633 aaPredicted RBP16.66■□□□□ 0.26
TRAPPC3-207ENST00000497251 MPSTP25325 297 aa16.66■□□□□ 0.26
TRAPPC3-207ENST00000497251 CASRP41180 1078 aa16.66■□□□□ 0.26
TRAPPC3-207ENST00000497251 SSR1P43307 286 aaKnown RBP16.66■□□□□ 0.26
TRAPPC3-207ENST00000497251 DCDC1P59894 354 aa16.66■□□□□ 0.26
TRAPPC3-207ENST00000497251 ZBED6P86452 979 aa16.66■□□□□ 0.26
TRAPPC3-207ENST00000497251 FANCCQ00597 558 aa16.66■□□□□ 0.26
TRAPPC3-207ENST00000497251 DSC2Q02487 901 aa16.66■□□□□ 0.26
TRAPPC3-207ENST00000497251 TLE1Q04724 770 aa16.66■□□□□ 0.26
TRAPPC3-207ENST00000497251 SEPT6Q14141 434 aa16.66■□□□□ 0.26
TRAPPC3-207ENST00000497251 NCBP2-AS2Q69YL0 99 aa16.66■□□□□ 0.26
TRAPPC3-207ENST00000497251 ALKBH5Q6P6C2 394 aaKnown RBP16.66■□□□□ 0.26
TRAPPC3-207ENST00000497251 TRIM74Q86UV6 250 aa16.66■□□□□ 0.26
TRAPPC3-207ENST00000497251 VSIG1Q86XK7 387 aa16.66■□□□□ 0.26
TRAPPC3-207ENST00000497251 RBM12BQ8IXT5 1001 aaKnown RBP16.66■□□□□ 0.26
TRAPPC3-207ENST00000497251 FAF2Q96CS3 445 aa16.66■□□□□ 0.26
TRAPPC3-207ENST00000497251 AGAP2Q99490 1192 aa16.66■□□□□ 0.26
TRAPPC3-207ENST00000497251 ZSCAN5AQ9BUG6 496 aa16.66■□□□□ 0.26
TRAPPC3-207ENST00000497251 TRIM39Q9HCM9 518 aa16.66■□□□□ 0.26
TRAPPC3-207ENST00000497251 UVRAGQ9P2Y5 699 aa16.66■□□□□ 0.26
TRAPPC3-207ENST00000497251 MN1Q10571 1320 aaPredicted RBP16.66■□□□□ 0.26
TRAPPC3-207ENST00000497251 PYCARD-AS1I3L0S3 204 aa16.65■□□□□ 0.26
TRAPPC3-207ENST00000497251 STK17BO94768 372 aa16.65■□□□□ 0.26
TRAPPC3-207ENST00000497251 RECKO95980 971 aa16.65■□□□□ 0.26
TRAPPC3-207ENST00000497251 IL11RAQ14626 422 aa16.65■□□□□ 0.26
TRAPPC3-207ENST00000497251 PTPRRQ15256 657 aa16.65■□□□□ 0.26
TRAPPC3-207ENST00000497251 SLC14A2Q15849 920 aa16.65■□□□□ 0.26
TRAPPC3-207ENST00000497251 CCDC13Q8IYE1 715 aa16.65■□□□□ 0.26
TRAPPC3-207ENST00000497251 LPCAT1Q8NF37 534 aa16.65■□□□□ 0.26
TRAPPC3-207ENST00000497251 C9orf43Q8TAL5 461 aaPredicted RBP16.65■□□□□ 0.26
TRAPPC3-207ENST00000497251 PMEPA1Q969W9 287 aa16.65■□□□□ 0.26
TRAPPC3-207ENST00000497251 WDR24Q96S15 920 aa16.65■□□□□ 0.26
TRAPPC3-207ENST00000497251 TRIM4Q9C037 500 aa16.65■□□□□ 0.26
TRAPPC3-207ENST00000497251 ZFYVE1Q9HBF4 777 aa16.65■□□□□ 0.26
TRAPPC3-207ENST00000497251 TTLL3Q9Y4R7 772 aa16.65■□□□□ 0.26
TRAPPC3-207ENST00000497251 KCTD3Q9Y597 815 aa16.65■□□□□ 0.26
TRAPPC3-207ENST00000497251 PCDHB3Q9Y5E6 796 aa16.65■□□□□ 0.26
TRAPPC3-207ENST00000497251 TRBV23OR9-2A0A075B6M9 112 aa16.64■□□□□ 0.25
TRAPPC3-207ENST00000497251 KCNJ13O60928 360 aa16.64■□□□□ 0.25
TRAPPC3-207ENST00000497251 PROSCO94903 275 aa16.64■□□□□ 0.25
TRAPPC3-207ENST00000497251 C9P02748 559 aa16.64■□□□□ 0.25
TRAPPC3-207ENST00000497251 ATP1A1P05023 1023 aaKnown RBP16.64■□□□□ 0.25
TRAPPC3-207ENST00000497251 ACP5P13686 325 aa16.64■□□□□ 0.25
TRAPPC3-207ENST00000497251 UBASH3AP57075 661 aa16.64■□□□□ 0.25
TRAPPC3-207ENST00000497251 UBE2IP63279 158 aaKnown RBP16.64■□□□□ 0.25
TRAPPC3-207ENST00000497251 NFKB2Q00653 900 aa16.64■□□□□ 0.25
TRAPPC3-207ENST00000497251 CDC20Q12834 499 aa16.64■□□□□ 0.25
TRAPPC3-207ENST00000497251 MMRN1Q13201 1228 aa16.64■□□□□ 0.25
TRAPPC3-207ENST00000497251 NFATC2Q13469 925 aa16.64■□□□□ 0.25
TRAPPC3-207ENST00000497251 QPCTQ16769 361 aa16.64■□□□□ 0.25
TRAPPC3-207ENST00000497251 KDELC2Q7Z4H8 507 aa16.64■□□□□ 0.25
TRAPPC3-207ENST00000497251 BRD8Q9H0E9 1235 aa16.64■□□□□ 0.25
TRAPPC3-207ENST00000497251 MAGEE1Q9HCI5 957 aa16.64■□□□□ 0.25
TRAPPC3-207ENST00000497251 CAPN11Q9UMQ6 739 aa16.64■□□□□ 0.25
TRAPPC3-207ENST00000497251 OAS3Q9Y6K5 1087 aaKnown RBP16.64■□□□□ 0.25
TRAPPC3-207ENST00000497251 A8MU76 341 aa16.63■□□□□ 0.25
TRAPPC3-207ENST00000497251 CHUKO15111 745 aa16.63■□□□□ 0.25
TRAPPC3-207ENST00000497251 VEGFDO43915 354 aa16.63■□□□□ 0.25
TRAPPC3-207ENST00000497251 MTA2O94776 668 aa16.63■□□□□ 0.25
TRAPPC3-207ENST00000497251 SLC25A14O95258 325 aaPredicted RBP16.63■□□□□ 0.25
TRAPPC3-207ENST00000497251 EML2O95834 649 aa16.63■□□□□ 0.25
TRAPPC3-207ENST00000497251 DLGAP3O95886 979 aa16.63■□□□□ 0.25
TRAPPC3-207ENST00000497251 HLA-DQB2P05538 268 aa16.63■□□□□ 0.25
TRAPPC3-207ENST00000497251 CD48P09326 243 aa16.63■□□□□ 0.25
TRAPPC3-207ENST00000497251 TCN2P20062 427 aa16.63■□□□□ 0.25
TRAPPC3-207ENST00000497251 PBX1P40424 430 aa16.63■□□□□ 0.25
TRAPPC3-207ENST00000497251 STAT5AP42229 794 aa16.63■□□□□ 0.25
TRAPPC3-207ENST00000497251 IFI35P80217 286 aaPredicted RBP16.63■□□□□ 0.25
TRAPPC3-207ENST00000497251 NIPAL4Q0D2K0 466 aa16.63■□□□□ 0.25
TRAPPC3-207ENST00000497251 IHHQ14623 411 aa16.63■□□□□ 0.25
TRAPPC3-207ENST00000497251 NFKBIBQ15653 356 aa16.63■□□□□ 0.25
TRAPPC3-207ENST00000497251 ZNF569Q5MCW4 686 aa16.63■□□□□ 0.25
TRAPPC3-207ENST00000497251 SNAP47Q5SQN1 464 aa16.63■□□□□ 0.25
TRAPPC3-207ENST00000497251 WASH2PQ6VEQ5 465 aa16.63■□□□□ 0.25
TRAPPC3-207ENST00000497251 ZNF761Q86XN6 746 aaPredicted RBP16.63■□□□□ 0.25
TRAPPC3-207ENST00000497251 CCNYQ8ND76 341 aa16.63■□□□□ 0.25
TRAPPC3-207ENST00000497251 BTBD6Q96KE9 485 aa16.63■□□□□ 0.25
TRAPPC3-207ENST00000497251 C9orf72Q96LT7 481 aa16.63■□□□□ 0.25
TRAPPC3-207ENST00000497251 WASH6PQ9NQA3 447 aa16.63■□□□□ 0.25
TRAPPC3-207ENST00000497251 KCNK6Q9Y257 313 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 97.8 ms