RNA–Protein interactions for RNA: ENST00000496567.5

C9orf3-222, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-222ENST00000496567 CNOT6Q9ULM6 557 aaKnown RBP21.58■■□□□ 1.05
C9orf3-222ENST00000496567 PCDHGA5Q9Y5G8 931 aa21.58■■□□□ 1.05
C9orf3-222ENST00000496567 GPR39O43194 453 aa21.57■■□□□ 1.04
C9orf3-222ENST00000496567 EPN2O95208 641 aa21.57■■□□□ 1.04
C9orf3-222ENST00000496567 KELP23276 732 aa21.57■■□□□ 1.04
C9orf3-222ENST00000496567 PHBP35232 272 aa21.57■■□□□ 1.04
C9orf3-222ENST00000496567 THOP1P52888 689 aa21.57■■□□□ 1.04
C9orf3-222ENST00000496567 KIAA1024LP59773 190 aa21.57■■□□□ 1.04
C9orf3-222ENST00000496567 GPX6P59796 221 aa21.57■■□□□ 1.04
C9orf3-222ENST00000496567 PTK2BQ14289 1009 aa21.57■■□□□ 1.04
C9orf3-222ENST00000496567 PSAPL1Q6NUJ1 521 aa21.57■■□□□ 1.04
C9orf3-222ENST00000496567 EMBQ6PCB8 327 aa21.57■■□□□ 1.04
C9orf3-222ENST00000496567 CYS1Q717R9 158 aa21.57■■□□□ 1.04
C9orf3-222ENST00000496567 TRMT10CQ7L0Y3 403 aaKnown RBP21.57■■□□□ 1.04
C9orf3-222ENST00000496567 SDCCAG8Q86SQ7 713 aaPredicted RBP21.57■■□□□ 1.04
C9orf3-222ENST00000496567 NXPE1Q8N323 547 aa21.57■■□□□ 1.04
C9orf3-222ENST00000496567 OTUD6BQ8N6M0 293 aa21.57■■□□□ 1.04
C9orf3-222ENST00000496567 OR13H1Q8NG92 308 aa21.57■■□□□ 1.04
C9orf3-222ENST00000496567 GPR150Q8NGU9 434 aa21.57■■□□□ 1.04
C9orf3-222ENST00000496567 COX14Q96I36 57 aa21.57■■□□□ 1.04
C9orf3-222ENST00000496567 FAM167BQ9BTA0 163 aa21.57■■□□□ 1.04
C9orf3-222ENST00000496567 TMEM74BQ9NUR3 256 aa21.57■■□□□ 1.04
C9orf3-222ENST00000496567 MOCS1Q9NZB8 636 aa21.57■■□□□ 1.04
C9orf3-222ENST00000496567 NINJ2Q9NZG7 142 aa21.57■■□□□ 1.04
C9orf3-222ENST00000496567 GON4LQ3T8J9 2241 aa21.57■■□□□ 1.04
C9orf3-222ENST00000496567 GOLGA8KD6RF30 607 aa21.57■■□□□ 1.04
C9orf3-222ENST00000496567 GOLGA8TH3BQL2 631 aa21.57■■□□□ 1.04
C9orf3-222ENST00000496567 VILLO15195 856 aa21.57■■□□□ 1.04
C9orf3-222ENST00000496567 PFDN6O15212 129 aa21.57■■□□□ 1.04
C9orf3-222ENST00000496567 PMS2P54278 862 aa21.57■■□□□ 1.04
C9orf3-222ENST00000496567 NFATC4Q14934 902 aa21.57■■□□□ 1.04
C9orf3-222ENST00000496567 MAP9Q49MG5 647 aa21.57■■□□□ 1.04
C9orf3-222ENST00000496567 HSP90AA5PQ58FG0 334 aa21.57■■□□□ 1.04
C9orf3-222ENST00000496567 ZNF449Q6P9G9 518 aa21.57■■□□□ 1.04
C9orf3-222ENST00000496567 SERPINA9Q86WD7 417 aa21.57■■□□□ 1.04
C9orf3-222ENST00000496567 PIANPQ8IYJ0 282 aa21.57■■□□□ 1.04
C9orf3-222ENST00000496567 DDHD1Q8NEL9 900 aa21.57■■□□□ 1.04
C9orf3-222ENST00000496567 SCG3Q8WXD2 468 aaKnown RBP21.57■■□□□ 1.04
C9orf3-222ENST00000496567 LGR4Q9BXB1 951 aa21.57■■□□□ 1.04
C9orf3-222ENST00000496567 IL1RAPL1Q9NZN1 696 aa21.57■■□□□ 1.04
C9orf3-222ENST00000496567 TMPRSS11EQ9UL52 423 aa21.57■■□□□ 1.04
C9orf3-222ENST00000496567 CACNA1HO95180 2353 aa21.56■■□□□ 1.04
C9orf3-222ENST00000496567 TLR4O00206 839 aa21.56■■□□□ 1.04
C9orf3-222ENST00000496567 ERVK-10P10266 1014 aa21.56■■□□□ 1.04
C9orf3-222ENST00000496567 OGNP20774 298 aaKnown RBP21.56■■□□□ 1.04
C9orf3-222ENST00000496567 ACRV1P26436 265 aa21.56■■□□□ 1.04
C9orf3-222ENST00000496567 PMLP29590 882 aa21.56■■□□□ 1.04
C9orf3-222ENST00000496567 STX2P32856 288 aa21.56■■□□□ 1.04
C9orf3-222ENST00000496567 NBL1P41271 181 aa21.56■■□□□ 1.04
C9orf3-222ENST00000496567 TTPAP49638 278 aa21.56■■□□□ 1.04
C9orf3-222ENST00000496567 CDKN1CP49918 316 aaPredicted RBP21.56■■□□□ 1.04
C9orf3-222ENST00000496567 C21orf59P57076 290 aa21.56■■□□□ 1.04
C9orf3-222ENST00000496567 MGAT5Q09328 741 aa21.56■■□□□ 1.04
C9orf3-222ENST00000496567 PDE1CQ14123 709 aaPredicted RBP21.56■■□□□ 1.04
C9orf3-222ENST00000496567 DUOXA1Q1HG43 343 aa21.56■■□□□ 1.04
C9orf3-222ENST00000496567 GPRC6AQ5T6X5 926 aa21.56■■□□□ 1.04
C9orf3-222ENST00000496567 KDM7AQ6ZMT4 941 aa21.56■■□□□ 1.04
C9orf3-222ENST00000496567 UNC5BQ8IZJ1 945 aa21.56■■□□□ 1.04
C9orf3-222ENST00000496567 HEXDCQ8WVB3 486 aa21.56■■□□□ 1.04
C9orf3-222ENST00000496567 COPS8Q99627 209 aa21.56■■□□□ 1.04
C9orf3-222ENST00000496567 TXLNGYQ9BZA5 131 aa21.56■■□□□ 1.04
C9orf3-222ENST00000496567 ZCCHC2Q9C0B9 1178 aaKnown RBP21.56■■□□□ 1.04
C9orf3-222ENST00000496567 TRIM39Q9HCM9 518 aa21.56■■□□□ 1.04
C9orf3-222ENST00000496567 GPR27Q9NS67 375 aa21.56■■□□□ 1.04
C9orf3-222ENST00000496567 TCRBV9S1A1TA0A576 114 aa21.55■■□□□ 1.04
C9orf3-222ENST00000496567 WNT1P04628 370 aa21.55■■□□□ 1.04
C9orf3-222ENST00000496567 PRSS56P0CW18 603 aa21.55■■□□□ 1.04
C9orf3-222ENST00000496567 RALBP11234 206 aa21.55■■□□□ 1.04
C9orf3-222ENST00000496567 CSNK1EP49674 416 aaKnown RBP21.55■■□□□ 1.04
C9orf3-222ENST00000496567 SMAD1Q15797 465 aaKnown RBP21.55■■□□□ 1.04
C9orf3-222ENST00000496567 ZNF470Q6ECI4 717 aa21.55■■□□□ 1.04
C9orf3-222ENST00000496567 TRMT10BQ6PF06 316 aaKnown RBP21.55■■□□□ 1.04
C9orf3-222ENST00000496567 MACC1Q6ZN28 852 aa21.55■■□□□ 1.04
C9orf3-222ENST00000496567 SUMF1Q8NBK3 374 aa21.55■■□□□ 1.04
C9orf3-222ENST00000496567 AENQ8WTP8 325 aaKnown RBP21.55■■□□□ 1.04
C9orf3-222ENST00000496567 CDKL2Q92772 493 aa21.55■■□□□ 1.04
C9orf3-222ENST00000496567 WDR92Q96MX6 357 aa21.55■■□□□ 1.04
C9orf3-222ENST00000496567 TCF12Q99081 682 aa21.55■■□□□ 1.04
C9orf3-222ENST00000496567 IARS2Q9NSE4 1012 aaKnown RBP21.55■■□□□ 1.04
C9orf3-222ENST00000496567 ZDHHC3Q9NYG2 299 aa21.55■■□□□ 1.04
C9orf3-222ENST00000496567 MARCH4Q9P2E8 410 aaPredicted RBP21.55■■□□□ 1.04
C9orf3-222ENST00000496567 BPTFQ12830 3046 aa21.54■■□□□ 1.04
C9orf3-222ENST00000496567 SDK1Q7Z5N4 2213 aa21.54■■□□□ 1.04
C9orf3-222ENST00000496567 CFAP99D6REC4 459 aa21.54■■□□□ 1.04
C9orf3-222ENST00000496567 ACSL3O95573 720 aa21.54■■□□□ 1.04
C9orf3-222ENST00000496567 ASMTLO95671 621 aa21.54■■□□□ 1.04
C9orf3-222ENST00000496567 AKT1P31749 480 aa21.54■■□□□ 1.04
C9orf3-222ENST00000496567 CA5AP35218 305 aa21.54■■□□□ 1.04
C9orf3-222ENST00000496567 ITIH4Q14624 930 aa21.54■■□□□ 1.04
C9orf3-222ENST00000496567 DBN1Q16643 649 aa21.54■■□□□ 1.04
C9orf3-222ENST00000496567 RNF187Q5TA31 235 aaPredicted RBP21.54■■□□□ 1.04
C9orf3-222ENST00000496567 MICALCLQ6ZW33 695 aa21.54■■□□□ 1.04
C9orf3-222ENST00000496567 TRIM74Q86UV6 250 aa21.54■■□□□ 1.04
C9orf3-222ENST00000496567 CILP2Q8IUL8 1156 aa21.54■■□□□ 1.04
C9orf3-222ENST00000496567 CNTN4Q8IWV2 1026 aa21.54■■□□□ 1.04
C9orf3-222ENST00000496567 DCUN1D1Q96GG9 259 aa21.54■■□□□ 1.04
C9orf3-222ENST00000496567 ZFATQ9P243 1243 aa21.54■■□□□ 1.04
C9orf3-222ENST00000496567 VPS18Q9P253 973 aa21.54■■□□□ 1.04
C9orf3-222ENST00000496567 VPS9D1Q9Y2B5 631 aa21.54■■□□□ 1.04
C9orf3-222ENST00000496567 SPTY2D1-AS1A0A0U1RR47 76 aa21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms