RNA–Protein interactions for RNA: ENST00000496393.2

NVL-223, Transcript of nuclear VCP-like, human

TSL 3

Gene NVL, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NVL-223	ENST00000496393	RPS18	P62269	152 aa	Known RBP	7.76	□□□□□ -1.17
NVL-223	ENST00000496393	IL10RB	Q08334	325 aa		7.76	□□□□□ -1.17
NVL-223	ENST00000496393	DNASE1L3	Q13609	305 aa		7.76	□□□□□ -1.17
NVL-223	ENST00000496393	MAP7	Q14244	749 aa		7.76	□□□□□ -1.17
NVL-223	ENST00000496393	RFTN1	Q14699	578 aa	Predicted RBP	7.76	□□□□□ -1.17
NVL-223	ENST00000496393	CRTC2	Q53ET0	693 aa	Predicted RBP	7.76	□□□□□ -1.17
NVL-223	ENST00000496393	LRRC66	Q68CR7	880 aa		7.76	□□□□□ -1.17
NVL-223	ENST00000496393	DCUN1D2	Q6PH85	259 aa		7.76	□□□□□ -1.17
NVL-223	ENST00000496393	ADAMTSL4	Q6UY14	1074 aa		7.76	□□□□□ -1.17
NVL-223	ENST00000496393	TRIM72	Q6ZMU5	477 aa		7.76	□□□□□ -1.17
NVL-223	ENST00000496393	RFX8	Q6ZV50	586 aa		7.76	□□□□□ -1.17
NVL-223	ENST00000496393	USP45	Q70EL2	814 aa		7.76	□□□□□ -1.17
NVL-223	ENST00000496393	MON1B	Q7L1V2	547 aa		7.76	□□□□□ -1.17
NVL-223	ENST00000496393	TECPR1	Q7Z6L1	1165 aa		7.76	□□□□□ -1.17
NVL-223	ENST00000496393	PHF13	Q86YI8	300 aa	Predicted RBP	7.76	□□□□□ -1.17
NVL-223	ENST00000496393	ZC3H8	Q8N5P1	291 aa	Known RBP eCLIP	7.76	□□□□□ -1.17
NVL-223	ENST00000496393	CT55	Q8WUE5	264 aa		7.76	□□□□□ -1.17
NVL-223	ENST00000496393	SCARF2	Q96GP6	870 aa	Predicted RBP	7.76	□□□□□ -1.17
NVL-223	ENST00000496393	PSKH2	Q96QS6	385 aa		7.76	□□□□□ -1.17
NVL-223	ENST00000496393	PEBP4	Q96S96	227 aa		7.76	□□□□□ -1.17
NVL-223	ENST00000496393	CNPY3	Q9BT09	278 aa		7.76	□□□□□ -1.17
NVL-223	ENST00000496393	SNRNP25	Q9BV90	132 aa	Known RBP	7.76	□□□□□ -1.17
NVL-223	ENST00000496393	RIOK2	Q9BVS4	552 aa	Known RBP	7.76	□□□□□ -1.17
NVL-223	ENST00000496393	PHTF1	Q9UMS5	762 aa		7.76	□□□□□ -1.17
NVL-223	ENST00000496393	MN1	Q10571	1320 aa	Predicted RBP	7.76	□□□□□ -1.17
NVL-223	ENST00000496393	DOPEY1	Q5JWR5	2465 aa		7.75	□□□□□ -1.17
NVL-223	ENST00000496393	TCRBV5S1A1T	A0A578	114 aa		7.75	□□□□□ -1.17
NVL-223	ENST00000496393	ARGFX	A6NJG6	315 aa		7.75	□□□□□ -1.17
NVL-223	ENST00000496393	TCP11X1	B4DZS4	312 aa		7.75	□□□□□ -1.17
NVL-223	ENST00000496393	PSMD11	O00231	422 aa		7.75	□□□□□ -1.17
NVL-223	ENST00000496393	KIF1C	O43896	1103 aa	Known RBP	7.75	□□□□□ -1.17
NVL-223	ENST00000496393	CREG1	O75629	220 aa		7.75	□□□□□ -1.17
NVL-223	ENST00000496393	RASSF9	O75901	435 aa		7.75	□□□□□ -1.17
NVL-223	ENST00000496393	PGLS	O95336	258 aa		7.75	□□□□□ -1.17
NVL-223	ENST00000496393	TIAF1	O95411	115 aa		7.75	□□□□□ -1.17
NVL-223	ENST00000496393	CLDN1	O95832	211 aa		7.75	□□□□□ -1.17
NVL-223	ENST00000496393	PSMA2	P25787	234 aa		7.75	□□□□□ -1.17
NVL-223	ENST00000496393	TEAD1	P28347	426 aa		7.75	□□□□□ -1.17
NVL-223	ENST00000496393	RENBP	P51606	427 aa		7.75	□□□□□ -1.17
NVL-223	ENST00000496393	AIF1	P55008	147 aa		7.75	□□□□□ -1.17
NVL-223	ENST00000496393	GSC	P56915	257 aa	Predicted RBP	7.75	□□□□□ -1.17
NVL-223	ENST00000496393	JAM2	P57087	298 aa		7.75	□□□□□ -1.17
NVL-223	ENST00000496393	NSUN2	Q08J23	767 aa	Known RBP eCLIP	7.75	□□□□□ -1.17
NVL-223	ENST00000496393	SEMA5A	Q13591	1074 aa		7.75	□□□□□ -1.17
NVL-223	ENST00000496393	LRP8	Q14114	963 aa		7.75	□□□□□ -1.17
NVL-223	ENST00000496393	SYCP1	Q15431	976 aa		7.75	□□□□□ -1.17
NVL-223	ENST00000496393	DPCR1	Q3MIW9	517 aa		7.75	□□□□□ -1.17
NVL-223	ENST00000496393	PLA2G4E	Q3MJ16	856 aa		7.75	□□□□□ -1.17
NVL-223	ENST00000496393	ZNF648	Q5T619	568 aa	Predicted RBP	7.75	□□□□□ -1.17
NVL-223	ENST00000496393	ARMC12	Q5T9G4	340 aa		7.75	□□□□□ -1.17
NVL-223	ENST00000496393	IYD	Q6PHW0	289 aa		7.75	□□□□□ -1.17
NVL-223	ENST00000496393	MAMDC2	Q7Z304	686 aa	Predicted RBP	7.75	□□□□□ -1.17
NVL-223	ENST00000496393	SLC9B2	Q86UD5	537 aa		7.75	□□□□□ -1.17
NVL-223	ENST00000496393	SRRM1	Q8IYB3	904 aa	Known RBP	7.75	□□□□□ -1.17
NVL-223	ENST00000496393	CBARP	Q8N350	705 aa	Predicted RBP	7.75	□□□□□ -1.17
NVL-223	ENST00000496393	PRR7	Q8TB68	274 aa		7.75	□□□□□ -1.17
NVL-223	ENST00000496393	C9orf72	Q96LT7	481 aa		7.75	□□□□□ -1.17
NVL-223	ENST00000496393	NUDCD1	Q96RS6	583 aa		7.75	□□□□□ -1.17
NVL-223	ENST00000496393	SLC25A23	Q9BV35	468 aa		7.75	□□□□□ -1.17
NVL-223	ENST00000496393	OSGEPL1	Q9H4B0	414 aa		7.75	□□□□□ -1.17
NVL-223	ENST00000496393	ACTL8	Q9H568	366 aa		7.75	□□□□□ -1.17
NVL-223	ENST00000496393	ARFGAP3	Q9NP61	516 aa		7.75	□□□□□ -1.17
NVL-223	ENST00000496393	SAMSN1	Q9NSI8	373 aa	Known RBP	7.75	□□□□□ -1.17
NVL-223	ENST00000496393	KCTD5	Q9NXV2	234 aa		7.75	□□□□□ -1.17
NVL-223	ENST00000496393	DONSON	Q9NYP3	566 aa		7.75	□□□□□ -1.17
NVL-223	ENST00000496393	OGFR	Q9NZT2	677 aa		7.75	□□□□□ -1.17
NVL-223	ENST00000496393	CPNE7	Q9UBL6	633 aa		7.75	□□□□□ -1.17
NVL-223	ENST00000496393	MAP4K5	Q9Y4K4	846 aa		7.75	□□□□□ -1.17
NVL-223	ENST00000496393	SLC30A1	Q9Y6M5	507 aa		7.75	□□□□□ -1.17
NVL-223	ENST00000496393	CSMD1	Q96PZ7	3565 aa		7.75	□□□□□ -1.17
NVL-223	ENST00000496393	MED13	Q9UHV7	2174 aa		7.74	□□□□□ -1.17
NVL-223	ENST00000496393		A0A1W2PQ67	120 aa		7.74	□□□□□ -1.17
NVL-223	ENST00000496393	TMCO5B	A8MYB1	307 aa		7.74	□□□□□ -1.17
NVL-223	ENST00000496393	KRT86	O43790	486 aa		7.74	□□□□□ -1.17
NVL-223	ENST00000496393	DNAJC6	O75061	913 aa		7.74	□□□□□ -1.17
NVL-223	ENST00000496393	SORBS2	O94875	1100 aa	Known RBP	7.74	□□□□□ -1.17
NVL-223	ENST00000496393	PEX11B	O96011	259 aa		7.74	□□□□□ -1.17
NVL-223	ENST00000496393	PDHA1	P08559	390 aa		7.74	□□□□□ -1.17
NVL-223	ENST00000496393	ANKRD34C	P0C6C1	535 aa		7.74	□□□□□ -1.17
NVL-223	ENST00000496393	F3	P13726	295 aa		7.74	□□□□□ -1.17
NVL-223	ENST00000496393	AMD1	P17707	334 aa		7.74	□□□□□ -1.17
NVL-223	ENST00000496393	NFKBIA	P25963	317 aa		7.74	□□□□□ -1.17
NVL-223	ENST00000496393	TNFRSF8	P28908	595 aa		7.74	□□□□□ -1.17
NVL-223	ENST00000496393	HTR7	P34969	479 aa		7.74	□□□□□ -1.17
NVL-223	ENST00000496393	GARS	P41250	739 aa	Known RBP	7.74	□□□□□ -1.17
NVL-223	ENST00000496393	CCL11	P51671	97 aa		7.74	□□□□□ -1.17
NVL-223	ENST00000496393	EPHA4	P54764	986 aa		7.74	□□□□□ -1.17
NVL-223	ENST00000496393	DPT	Q07507	201 aa		7.74	□□□□□ -1.17
NVL-223	ENST00000496393	IL10RA	Q13651	578 aa		7.74	□□□□□ -1.17
NVL-223	ENST00000496393	INPP5J	Q15735	1006 aa	Predicted RBP	7.74	□□□□□ -1.17
NVL-223	ENST00000496393	SEPT7	Q16181	437 aa	Known RBP	7.74	□□□□□ -1.17
NVL-223	ENST00000496393	FAM199X	Q6PEV8	388 aa	Predicted RBP	7.74	□□□□□ -1.17
NVL-223	ENST00000496393	CRTC3	Q6UUV7	619 aa		7.74	□□□□□ -1.17
NVL-223	ENST00000496393	FAM92B	Q6ZTR7	304 aa		7.74	□□□□□ -1.17
NVL-223	ENST00000496393	RETREG3	Q86VR2	466 aa		7.74	□□□□□ -1.17
NVL-223	ENST00000496393	PLXDC1	Q8IUK5	500 aa		7.74	□□□□□ -1.17
NVL-223	ENST00000496393	LZTR1	Q8N653	840 aa		7.74	□□□□□ -1.17
NVL-223	ENST00000496393	MLKL	Q8NB16	471 aa		7.74	□□□□□ -1.17
NVL-223	ENST00000496393	PIH1D2	Q8WWB5	315 aa		7.74	□□□□□ -1.17
NVL-223	ENST00000496393	RSC1A1	Q92681	617 aa		7.74	□□□□□ -1.17

Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms