RNA–Protein interactions for RNA: ENST00000496375.1

CXCL12-208, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5

Gene CXCL12, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-208ENST00000496375 PACSIN2Q9UNF0 486 aaPredicted RBP14.3□□□□□ -0.12
CXCL12-208ENST00000496375 TMEM98Q9Y2Y6 226 aa14.3□□□□□ -0.12
CXCL12-208ENST00000496375 PLEKHM1Q9Y4G2 1056 aa14.3□□□□□ -0.12
CXCL12-208ENST00000496375 TTLL3Q9Y4R7 772 aa14.3□□□□□ -0.12
CXCL12-208ENST00000496375 HEY1Q9Y5J3 304 aa14.3□□□□□ -0.12
CXCL12-208ENST00000496375 A0A0J9YYE9 177 aa14.29□□□□□ -0.12
CXCL12-208ENST00000496375 HACD1B0YJ81 288 aa14.29□□□□□ -0.12
CXCL12-208ENST00000496375 ZW10O43264 779 aa14.29□□□□□ -0.12
CXCL12-208ENST00000496375 MAP3K6O95382 1288 aa14.29□□□□□ -0.12
CXCL12-208ENST00000496375 TRBC1P01850 177 aa14.29□□□□□ -0.12
CXCL12-208ENST00000496375 ZNF30P17039 623 aa14.29□□□□□ -0.12
CXCL12-208ENST00000496375 CES1P23141 567 aa14.29□□□□□ -0.12
CXCL12-208ENST00000496375 CETN2P41208 172 aa14.29□□□□□ -0.12
CXCL12-208ENST00000496375 ACTR1BP42025 376 aa14.29□□□□□ -0.12
CXCL12-208ENST00000496375 ACTR1AP61163 376 aa14.29□□□□□ -0.12
CXCL12-208ENST00000496375 DYNLT1P63172 113 aa14.29□□□□□ -0.12
CXCL12-208ENST00000496375 DSC2Q02487 901 aa14.29□□□□□ -0.12
CXCL12-208ENST00000496375 PTSQ03393 145 aa14.29□□□□□ -0.12
CXCL12-208ENST00000496375 PEX6Q13608 980 aa14.29□□□□□ -0.12
CXCL12-208ENST00000496375 IHHQ14623 411 aa14.29□□□□□ -0.12
CXCL12-208ENST00000496375 NOMO1Q15155 1222 aa14.29□□□□□ -0.12
CXCL12-208ENST00000496375 MANEAQ5SRI9 462 aa14.29□□□□□ -0.12
CXCL12-208ENST00000496375 ZNF574Q6ZN55 896 aaPredicted RBP14.29□□□□□ -0.12
CXCL12-208ENST00000496375 MARK2Q7KZI7 788 aaKnown RBP14.29□□□□□ -0.12
CXCL12-208ENST00000496375 NAGSQ8N159 534 aa14.29□□□□□ -0.12
CXCL12-208ENST00000496375 RCBTB1Q8NDN9 531 aa14.29□□□□□ -0.12
CXCL12-208ENST00000496375 P3H4Q92791 437 aa14.29□□□□□ -0.12
CXCL12-208ENST00000496375 SGF29Q96ES7 293 aa14.29□□□□□ -0.12
CXCL12-208ENST00000496375 SCARF2Q96GP6 870 aaPredicted RBP14.29□□□□□ -0.12
CXCL12-208ENST00000496375 CARD9Q9H257 536 aa14.29□□□□□ -0.12
CXCL12-208ENST00000496375 RBM22Q9NW64 420 aaKnown RBP eCLIP14.29□□□□□ -0.12
CXCL12-208ENST00000496375 SEPT10Q9P0V9 454 aa14.29□□□□□ -0.12
CXCL12-208ENST00000496375 CHKBQ9Y259 395 aa14.29□□□□□ -0.12
CXCL12-208ENST00000496375 SETXQ7Z333 2677 aaKnown RBP14.29□□□□□ -0.12
CXCL12-208ENST00000496375 BOD1L1Q8NFC6 3051 aa14.29□□□□□ -0.12
CXCL12-208ENST00000496375 ZFC3H1O60293 1989 aaKnown RBP14.29□□□□□ -0.12
CXCL12-208ENST00000496375 IGHV5-10-1A0A0J9YXX1 117 aa14.28□□□□□ -0.12
CXCL12-208ENST00000496375 B8ZZF3 427 aa14.28□□□□□ -0.12
CXCL12-208ENST00000496375 J3QKU1 62 aa14.28□□□□□ -0.12
CXCL12-208ENST00000496375 TJP3O95049 919 aa14.28□□□□□ -0.12
CXCL12-208ENST00000496375 CCL4P13236 92 aa14.28□□□□□ -0.12
CXCL12-208ENST00000496375 CD1CP29017 333 aa14.28□□□□□ -0.12
CXCL12-208ENST00000496375 GPR3P46089 330 aa14.28□□□□□ -0.12
CXCL12-208ENST00000496375 STC1P52823 247 aa14.28□□□□□ -0.12
CXCL12-208ENST00000496375 CLPPQ16740 277 aaPredicted RBP14.28□□□□□ -0.12
CXCL12-208ENST00000496375 KAZNQ674X7 775 aa14.28□□□□□ -0.12
CXCL12-208ENST00000496375 ZNF765Q7L2R6 523 aa14.28□□□□□ -0.12
CXCL12-208ENST00000496375 VASH2Q86V25 355 aa14.28□□□□□ -0.12
CXCL12-208ENST00000496375 LRRN4Q8WUT4 740 aa14.28□□□□□ -0.12
CXCL12-208ENST00000496375 CCDC74BQ96LY2 380 aa14.28□□□□□ -0.12
CXCL12-208ENST00000496375 QKIQ96PU8 341 aaKnown RBP eCLIP14.28□□□□□ -0.12
CXCL12-208ENST00000496375 AGAP2Q99490 1192 aa14.28□□□□□ -0.12
CXCL12-208ENST00000496375 TLR10Q9BXR5 811 aa14.28□□□□□ -0.12
CXCL12-208ENST00000496375 TDRD1Q9BXT4 1180 aaKnown RBP14.28□□□□□ -0.12
CXCL12-208ENST00000496375 HAUS2Q9NVX0 235 aa14.28□□□□□ -0.12
CXCL12-208ENST00000496375 PCDHB11Q9Y5F2 797 aa14.28□□□□□ -0.12
CXCL12-208ENST00000496375 ASH1LQ9NR48 2969 aaKnown RBP14.27□□□□□ -0.12
CXCL12-208ENST00000496375 HGSO14964 777 aaPredicted RBP14.27□□□□□ -0.13
CXCL12-208ENST00000496375 PPM1DO15297 605 aa14.27□□□□□ -0.13
CXCL12-208ENST00000496375 INPP4BO15327 924 aa14.27□□□□□ -0.13
CXCL12-208ENST00000496375 MTSS1O43312 755 aa14.27□□□□□ -0.13
CXCL12-208ENST00000496375 ZNF189O75820 626 aaPredicted RBP14.27□□□□□ -0.13
CXCL12-208ENST00000496375 HLA-DQB2P05538 268 aa14.27□□□□□ -0.13
CXCL12-208ENST00000496375 PYGLP06737 847 aa14.27□□□□□ -0.13
CXCL12-208ENST00000496375 CD82P27701 267 aa14.27□□□□□ -0.13
CXCL12-208ENST00000496375 LIMK2P53671 638 aa14.27□□□□□ -0.13
CXCL12-208ENST00000496375 ZBTB17Q13105 803 aa14.27□□□□□ -0.13
CXCL12-208ENST00000496375 SLC14A2Q15849 920 aa14.27□□□□□ -0.13
CXCL12-208ENST00000496375 LINC00303Q3SY05 128 aa14.27□□□□□ -0.13
CXCL12-208ENST00000496375 PYCR3Q53H96 274 aa14.27□□□□□ -0.13
CXCL12-208ENST00000496375 TMEM164Q5U3C3 297 aa14.27□□□□□ -0.13
CXCL12-208ENST00000496375 NKAIN2Q5VXU1 208 aa14.27□□□□□ -0.13
CXCL12-208ENST00000496375 AADACL2Q6P093 401 aa14.27□□□□□ -0.13
CXCL12-208ENST00000496375 NLRP8Q86W28 1048 aa14.27□□□□□ -0.13
CXCL12-208ENST00000496375 DTX1Q86Y01 620 aa14.27□□□□□ -0.13
CXCL12-208ENST00000496375 GALNT13Q8IUC8 556 aa14.27□□□□□ -0.13
CXCL12-208ENST00000496375 CNTD1Q8N815 330 aa14.27□□□□□ -0.13
CXCL12-208ENST00000496375 CCNYQ8ND76 341 aa14.27□□□□□ -0.13
CXCL12-208ENST00000496375 LPCAT1Q8NF37 534 aa14.27□□□□□ -0.13
CXCL12-208ENST00000496375 ARRDC2Q8TBH0 407 aa14.27□□□□□ -0.13
CXCL12-208ENST00000496375 TFB1MQ8WVM0 346 aaKnown RBP14.27□□□□□ -0.13
CXCL12-208ENST00000496375 COX14Q96I36 57 aa14.27□□□□□ -0.13
CXCL12-208ENST00000496375 RIOK2Q9BVS4 552 aaKnown RBP14.27□□□□□ -0.13
CXCL12-208ENST00000496375 HEMGNQ9BXL5 484 aa14.27□□□□□ -0.13
CXCL12-208ENST00000496375 B3GNT4Q9C0J1 378 aa14.27□□□□□ -0.13
CXCL12-208ENST00000496375 KCND1Q9NSA2 647 aa14.27□□□□□ -0.13
CXCL12-208ENST00000496375 SAE1Q9UBE0 346 aaPredicted RBP14.27□□□□□ -0.13
CXCL12-208ENST00000496375 DNPEPQ9ULA0 475 aa14.27□□□□□ -0.13
CXCL12-208ENST00000496375 FLNBO75369 2602 aaKnown RBP14.27□□□□□ -0.13
CXCL12-208ENST00000496375 SDK2Q58EX2 2172 aa14.26□□□□□ -0.13
CXCL12-208ENST00000496375 TRBV23OR9-2A0A075B6M9 112 aa14.26□□□□□ -0.13
CXCL12-208ENST00000496375 IGHV1OR21-1A0A087WYE8 117 aa14.26□□□□□ -0.13
CXCL12-208ENST00000496375 GOLGA6L9A6NEM1 432 aa14.26□□□□□ -0.13
CXCL12-208ENST00000496375 KCNK1O00180 336 aa14.26□□□□□ -0.13
CXCL12-208ENST00000496375 CLDN7O95471 211 aa14.26□□□□□ -0.13
CXCL12-208ENST00000496375 ASMTLO95671 621 aa14.26□□□□□ -0.13
CXCL12-208ENST00000496375 PRLP01236 227 aa14.26□□□□□ -0.13
CXCL12-208ENST00000496375 CA4P22748 312 aa14.26□□□□□ -0.13
CXCL12-208ENST00000496375 CSF2RBP32927 897 aa14.26□□□□□ -0.13
CXCL12-208ENST00000496375 NIPAL4Q0D2K0 466 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms