RNA–Protein interactions for RNA: ENST00000495756.5

ATG3-208, Transcript of autophagy related 3, humanhuman

TSL 1 (best)

Gene ATG3, Length 1,455 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-208ENST00000495756 ACSS3Q9H6R3 686 aa19.32■□□□□ 0.68
ATG3-208ENST00000495756 RABGEF1Q9UJ41 708 aa19.32■□□□□ 0.68
ATG3-208ENST00000495756 OR1A2Q9Y585 309 aa19.32■□□□□ 0.68
ATG3-208ENST00000495756 MYO15AQ9UKN7 3530 aa19.32■□□□□ 0.68
ATG3-208ENST00000495756 FANCMQ8IYD8 2048 aa19.32■□□□□ 0.68
ATG3-208ENST00000495756 A0A087WUV0 522 aaPredicted RBP19.31■□□□□ 0.68
ATG3-208ENST00000495756 FAM159BA6NKW6 160 aa19.31■□□□□ 0.68
ATG3-208ENST00000495756 ITPKAP23677 461 aa19.31■□□□□ 0.68
ATG3-208ENST00000495756 ACRV1P26436 265 aa19.31■□□□□ 0.68
ATG3-208ENST00000495756 PFN3P60673 137 aa19.31■□□□□ 0.68
ATG3-208ENST00000495756 CDK3Q00526 305 aa19.31■□□□□ 0.68
ATG3-208ENST00000495756 CTBP1Q13363 440 aa19.31■□□□□ 0.68
ATG3-208ENST00000495756 KBTBD12Q3ZCT8 623 aa19.31■□□□□ 0.68
ATG3-208ENST00000495756 GPRC6AQ5T6X5 926 aa19.31■□□□□ 0.68
ATG3-208ENST00000495756 KYAT3Q6YP21 454 aaKnown RBP19.31■□□□□ 0.68
ATG3-208ENST00000495756 CERS6Q6ZMG9 384 aa19.31■□□□□ 0.68
ATG3-208ENST00000495756 LDB1Q86U70 411 aaPredicted RBP19.31■□□□□ 0.68
ATG3-208ENST00000495756 PHYKPLQ8IUZ5 450 aa19.31■□□□□ 0.68
ATG3-208ENST00000495756 DENND6AQ8IWF6 608 aa19.31■□□□□ 0.68
ATG3-208ENST00000495756 RGL4Q8IZJ4 473 aa19.31■□□□□ 0.68
ATG3-208ENST00000495756 GABPB2Q8TAK5 448 aaPredicted RBP19.31■□□□□ 0.68
ATG3-208ENST00000495756 UHMK1Q8TAS1 419 aaKnown RBP19.31■□□□□ 0.68
ATG3-208ENST00000495756 FUBP1Q96AE4 644 aaKnown RBP19.31■□□□□ 0.68
ATG3-208ENST00000495756 COX14Q96I36 57 aa19.31■□□□□ 0.68
ATG3-208ENST00000495756 APOOQ9BUR5 198 aa19.31■□□□□ 0.68
ATG3-208ENST00000495756 SMYD2Q9NRG4 433 aa19.31■□□□□ 0.68
ATG3-208ENST00000495756 ZFATQ9P243 1243 aa19.31■□□□□ 0.68
ATG3-208ENST00000495756 SLC17A6Q9P2U8 582 aa19.31■□□□□ 0.68
ATG3-208ENST00000495756 A6NNZ2 444 aa19.3■□□□□ 0.68
ATG3-208ENST00000495756 CXorf49A8MYA2 514 aaPredicted RBP19.3■□□□□ 0.68
ATG3-208ENST00000495756 PIAS1O75925 651 aa19.3■□□□□ 0.68
ATG3-208ENST00000495756 SLC25A14O95258 325 aaPredicted RBP19.3■□□□□ 0.68
ATG3-208ENST00000495756 H2AFXP16104 143 aaPredicted RBP19.3■□□□□ 0.68
ATG3-208ENST00000495756 OGNP20774 298 aaKnown RBP19.3■□□□□ 0.68
ATG3-208ENST00000495756 PMLP29590 882 aa19.3■□□□□ 0.68
ATG3-208ENST00000495756 SLC1A2P43004 574 aa19.3■□□□□ 0.68
ATG3-208ENST00000495756 TTPAP49638 278 aa19.3■□□□□ 0.68
ATG3-208ENST00000495756 RACK1P63244 317 aaKnown RBP19.3■□□□□ 0.68
ATG3-208ENST00000495756 DBN1Q16643 649 aa19.3■□□□□ 0.68
ATG3-208ENST00000495756 TYSND1Q2T9J0 566 aa19.3■□□□□ 0.68
ATG3-208ENST00000495756 BEND6Q5SZJ8 279 aaPredicted RBP19.3■□□□□ 0.68
ATG3-208ENST00000495756 LYPLAL1Q5VWZ2 237 aa19.3■□□□□ 0.68
ATG3-208ENST00000495756 ZC3H14Q6PJT7 736 aaKnown RBP19.3■□□□□ 0.68
ATG3-208ENST00000495756 DDHD1Q8NEL9 900 aa19.3■□□□□ 0.68
ATG3-208ENST00000495756 GDAP1Q8TB36 358 aa19.3■□□□□ 0.68
ATG3-208ENST00000495756 SCG3Q8WXD2 468 aaKnown RBP19.3■□□□□ 0.68
ATG3-208ENST00000495756 CDKL2Q92772 493 aa19.3■□□□□ 0.68
ATG3-208ENST00000495756 TCF12Q99081 682 aa19.3■□□□□ 0.68
ATG3-208ENST00000495756 CYTH2Q99418 400 aa19.3■□□□□ 0.68
ATG3-208ENST00000495756 TTC1Q99614 292 aa19.3■□□□□ 0.68
ATG3-208ENST00000495756 LGR4Q9BXB1 951 aa19.3■□□□□ 0.68
ATG3-208ENST00000495756 TM9SF3Q9HD45 589 aa19.3■□□□□ 0.68
ATG3-208ENST00000495756 AASDHPPTQ9NRN7 309 aa19.3■□□□□ 0.68
ATG3-208ENST00000495756 PHPT1Q9NRX4 125 aaPredicted RBP19.3■□□□□ 0.68
ATG3-208ENST00000495756 FBXO5Q9UKT4 447 aa19.3■□□□□ 0.68
ATG3-208ENST00000495756 R4GN57 208 aa19.3■□□□□ 0.68
ATG3-208ENST00000495756 WDR87Q6ZQQ6 2873 aa19.3■□□□□ 0.68
ATG3-208ENST00000495756 TNRC6BQ9UPQ9 1833 aaKnown RBP19.3■□□□□ 0.68
ATG3-208ENST00000495756 TOR1BO14657 336 aa19.29■□□□□ 0.68
ATG3-208ENST00000495756 HOXC4P09017 264 aaPredicted RBP19.29■□□□□ 0.68
ATG3-208ENST00000495756 MYCLP1P12525 358 aaPredicted RBP19.29■□□□□ 0.68
ATG3-208ENST00000495756 RABIFP47224 123 aa19.29■□□□□ 0.68
ATG3-208ENST00000495756 YPEL5P62699 121 aa19.29■□□□□ 0.68
ATG3-208ENST00000495756 LDLRAP1Q5SW96 308 aa19.29■□□□□ 0.68
ATG3-208ENST00000495756 PRR23BQ6ZRT6 265 aa19.29■□□□□ 0.68
ATG3-208ENST00000495756 Q6ZSR6 202 aa19.29■□□□□ 0.68
ATG3-208ENST00000495756 KIAA0408Q6ZU52 694 aa19.29■□□□□ 0.68
ATG3-208ENST00000495756 TRIM74Q86UV6 250 aa19.29■□□□□ 0.68
ATG3-208ENST00000495756 C2CD4AQ8NCU7 369 aaPredicted RBP19.29■□□□□ 0.68
ATG3-208ENST00000495756 PRSS33Q8NF86 280 aa19.29■□□□□ 0.68
ATG3-208ENST00000495756 FAM174AQ8TBP5 190 aa19.29■□□□□ 0.68
ATG3-208ENST00000495756 COPS8Q99627 209 aa19.29■□□□□ 0.68
ATG3-208ENST00000495756 ARFGAP3Q9NP61 516 aa19.29■□□□□ 0.68
ATG3-208ENST00000495756 ARGLU1Q9NWB6 273 aaPredicted RBP19.29■□□□□ 0.68
ATG3-208ENST00000495756 ZDHHC3Q9NYG2 299 aa19.29■□□□□ 0.68
ATG3-208ENST00000495756 FRYLO94915 3013 aa19.29■□□□□ 0.68
ATG3-208ENST00000495756 CACNB4O00305 520 aaPredicted RBP19.28■□□□□ 0.68
ATG3-208ENST00000495756 S1PR4O95977 384 aa19.28■□□□□ 0.68
ATG3-208ENST00000495756 PPARGP37231 505 aaPredicted RBP19.28■□□□□ 0.68
ATG3-208ENST00000495756 TCF15Q12870 199 aa19.28■□□□□ 0.68
ATG3-208ENST00000495756 EFTUD2Q15029 972 aaKnown RBP eCLIP19.28■□□□□ 0.68
ATG3-208ENST00000495756 KHDC1Q4VXA5 237 aaKnown RBP19.28■□□□□ 0.68
ATG3-208ENST00000495756 RNF187Q5TA31 235 aaPredicted RBP19.28■□□□□ 0.68
ATG3-208ENST00000495756 CTAGE3PQ8IX95 158 aa19.28■□□□□ 0.68
ATG3-208ENST00000495756 PPM1NQ8N819 430 aa19.28■□□□□ 0.68
ATG3-208ENST00000495756 MFSD2AQ8NA29 543 aa19.28■□□□□ 0.68
ATG3-208ENST00000495756 OR13H1Q8NG92 308 aa19.28■□□□□ 0.68
ATG3-208ENST00000495756 TRIM39Q9HCM9 518 aa19.28■□□□□ 0.68
ATG3-208ENST00000495756 INTS10Q9NVR2 710 aaKnown RBP19.28■□□□□ 0.68
ATG3-208ENST00000495756 PSAT1Q9Y617 370 aa19.28■□□□□ 0.68
ATG3-208ENST00000495756 OAS3Q9Y6K5 1087 aaKnown RBP19.28■□□□□ 0.68
ATG3-208ENST00000495756 IGLV3-16A0A075B6K0 115 aa19.28■□□□□ 0.68
ATG3-208ENST00000495756 A0A1W2PR77 199 aa19.28■□□□□ 0.68
ATG3-208ENST00000495756 PFDN6O15212 129 aa19.28■□□□□ 0.68
ATG3-208ENST00000495756 BCAT2O15382 392 aaPredicted RBP19.28■□□□□ 0.68
ATG3-208ENST00000495756 MTX2O75431 263 aa19.28■□□□□ 0.68
ATG3-208ENST00000495756 NDUFS3O75489 264 aa19.28■□□□□ 0.68
ATG3-208ENST00000495756 F7P08709 466 aaPredicted RBP19.28■□□□□ 0.68
ATG3-208ENST00000495756 CD38P28907 300 aa19.28■□□□□ 0.68
ATG3-208ENST00000495756 KIAA1024LP59773 190 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms