RNA–Protein interactions for RNA: ENST00000494623.1

CHMP3-209, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2

Gene CHMP3, Length 2,724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-209ENST00000494623 TMEM175Q9BSA9 504 aa11.13□□□□□ -0.63
CHMP3-209ENST00000494623 HGH1Q9BTY7 390 aa11.13□□□□□ -0.63
CHMP3-209ENST00000494623 TRMT6Q9UJA5 497 aaKnown RBP11.13□□□□□ -0.63
CHMP3-209ENST00000494623 NDUFAF1Q9Y375 327 aa11.13□□□□□ -0.63
CHMP3-209ENST00000494623 A0A1B0GVM2 712 aa11.13□□□□□ -0.63
CHMP3-209ENST00000494623 SYCE1LA8MT33 242 aa11.13□□□□□ -0.63
CHMP3-209ENST00000494623 H0Y626 953 aa11.13□□□□□ -0.63
CHMP3-209ENST00000494623 TMCC1O94876 653 aa11.13□□□□□ -0.63
CHMP3-209ENST00000494623 C1RP00736 705 aa11.13□□□□□ -0.63
CHMP3-209ENST00000494623 HSPA8P11142 646 aaKnown RBP11.13□□□□□ -0.63
CHMP3-209ENST00000494623 MZF1P28698 734 aaPredicted RBP11.13□□□□□ -0.63
CHMP3-209ENST00000494623 GRIA3P42263 894 aa11.13□□□□□ -0.63
CHMP3-209ENST00000494623 USP41Q3LFD5 358 aa11.13□□□□□ -0.63
CHMP3-209ENST00000494623 SLC8B1Q6J4K2 584 aa11.13□□□□□ -0.63
CHMP3-209ENST00000494623 UGT3A1Q6NUS8 523 aa11.13□□□□□ -0.63
CHMP3-209ENST00000494623 HACD2Q6Y1H2 254 aa11.13□□□□□ -0.63
CHMP3-209ENST00000494623 SATL1Q86VE3 508 aa11.13□□□□□ -0.63
CHMP3-209ENST00000494623 CPNE9Q8IYJ1 553 aa11.13□□□□□ -0.63
CHMP3-209ENST00000494623 NAT14Q8WUY8 206 aa11.13□□□□□ -0.63
CHMP3-209ENST00000494623 PLD4Q96BZ4 506 aa11.13□□□□□ -0.63
CHMP3-209ENST00000494623 ACOX2Q99424 681 aa11.13□□□□□ -0.63
CHMP3-209ENST00000494623 SPATA16Q9BXB7 569 aa11.13□□□□□ -0.63
CHMP3-209ENST00000494623 MRPL9Q9BYD2 267 aaKnown RBP11.13□□□□□ -0.63
CHMP3-209ENST00000494623 TRIM8Q9BZR9 551 aa11.13□□□□□ -0.63
CHMP3-209ENST00000494623 NOL11Q9H8H0 719 aaKnown RBP11.13□□□□□ -0.63
CHMP3-209ENST00000494623 EGFL7Q9UHF1 273 aa11.13□□□□□ -0.63
CHMP3-209ENST00000494623 LZTS1Q9Y250 596 aa11.13□□□□□ -0.63
CHMP3-209ENST00000494623 OAS3Q9Y6K5 1087 aaKnown RBP11.13□□□□□ -0.63
CHMP3-209ENST00000494623 TET1Q8NFU7 2136 aa11.13□□□□□ -0.63
CHMP3-209ENST00000494623 E5RI56 91 aa11.12□□□□□ -0.63
CHMP3-209ENST00000494623 KIF3CO14782 793 aa11.12□□□□□ -0.63
CHMP3-209ENST00000494623 HOXA2O43364 376 aa11.12□□□□□ -0.63
CHMP3-209ENST00000494623 SNX2O60749 519 aa11.12□□□□□ -0.63
CHMP3-209ENST00000494623 TIPRLO75663 272 aa11.12□□□□□ -0.63
CHMP3-209ENST00000494623 CD160O95971 181 aa11.12□□□□□ -0.63
CHMP3-209ENST00000494623 ZNF26P17031 533 aaPredicted RBP11.12□□□□□ -0.63
CHMP3-209ENST00000494623 CTPS1P17812 591 aa11.12□□□□□ -0.63
CHMP3-209ENST00000494623 GSTT1P30711 240 aa11.12□□□□□ -0.63
CHMP3-209ENST00000494623 TTPAP49638 278 aa11.12□□□□□ -0.63
CHMP3-209ENST00000494623 CCL23P55773 120 aa11.12□□□□□ -0.63
CHMP3-209ENST00000494623 IL2P60568 153 aa11.12□□□□□ -0.63
CHMP3-209ENST00000494623 YBX1P67809 324 aaKnown RBP11.12□□□□□ -0.63
CHMP3-209ENST00000494623 CTSL3PQ5NE16 218 aa11.12□□□□□ -0.63
CHMP3-209ENST00000494623 CXorf57Q6NSI4 855 aaKnown RBP11.12□□□□□ -0.63
CHMP3-209ENST00000494623 SYVN1Q86TM6 617 aa11.12□□□□□ -0.63
CHMP3-209ENST00000494623 GPSM1Q86YR5 675 aa11.12□□□□□ -0.63
CHMP3-209ENST00000494623 PBXIP1Q96AQ6 731 aa11.12□□□□□ -0.63
CHMP3-209ENST00000494623 CD274Q9NZQ7 290 aa11.12□□□□□ -0.63
CHMP3-209ENST00000494623 MTRRQ9UBK8 725 aa11.12□□□□□ -0.63
CHMP3-209ENST00000494623 TBC1D30Q9Y2I9 924 aa11.12□□□□□ -0.63
CHMP3-209ENST00000494623 FCF1Q9Y324 198 aaKnown RBP11.12□□□□□ -0.63
CHMP3-209ENST00000494623 SH3BP1Q9Y3L3 701 aa11.12□□□□□ -0.63
CHMP3-209ENST00000494623 PCDHB9Q9Y5E1 797 aa11.12□□□□□ -0.63
CHMP3-209ENST00000494623 MYOCOSA0A1B0GUC4 107 aa11.12□□□□□ -0.63
CHMP3-209ENST00000494623 TCRBV3S1A0A5B6 114 aa11.12□□□□□ -0.63
CHMP3-209ENST00000494623 BBIP1A8MTZ0 92 aa11.12□□□□□ -0.63
CHMP3-209ENST00000494623 NME4O00746 187 aa11.12□□□□□ -0.63
CHMP3-209ENST00000494623 PFDN6O15212 129 aa11.12□□□□□ -0.63
CHMP3-209ENST00000494623 TBL1XO60907 577 aa11.12□□□□□ -0.63
CHMP3-209ENST00000494623 CAPNS1P04632 268 aa11.12□□□□□ -0.63
CHMP3-209ENST00000494623 CES1P23141 567 aa11.12□□□□□ -0.63
CHMP3-209ENST00000494623 SLC7A1P30825 629 aa11.12□□□□□ -0.63
CHMP3-209ENST00000494623 ARL1P40616 181 aaPredicted RBP11.12□□□□□ -0.63
CHMP3-209ENST00000494623 APLP1P51693 650 aa11.12□□□□□ -0.63
CHMP3-209ENST00000494623 HK3P52790 923 aa11.12□□□□□ -0.63
CHMP3-209ENST00000494623 IRX1P78414 480 aaPredicted RBP11.12□□□□□ -0.63
CHMP3-209ENST00000494623 MTX3Q5HYI7 312 aa11.12□□□□□ -0.63
CHMP3-209ENST00000494623 SPPL2CQ8IUH8 684 aa11.12□□□□□ -0.63
CHMP3-209ENST00000494623 FAM110BQ8TC76 370 aa11.12□□□□□ -0.63
CHMP3-209ENST00000494623 CANT1Q8WVQ1 401 aa11.12□□□□□ -0.63
CHMP3-209ENST00000494623 HOPXQ9BPY8 73 aaPredicted RBP11.12□□□□□ -0.63
CHMP3-209ENST00000494623 RETREG1Q9H6L5 497 aa11.12□□□□□ -0.63
CHMP3-209ENST00000494623 PHF24Q9UPV7 400 aa11.12□□□□□ -0.63
CHMP3-209ENST00000494623 AURKCQ9UQB9 309 aa11.12□□□□□ -0.63
CHMP3-209ENST00000494623 ASB1Q9Y576 335 aa11.12□□□□□ -0.63
CHMP3-209ENST00000494623 C7orf72A4D263 438 aa11.11□□□□□ -0.63
CHMP3-209ENST00000494623 AP1G1O43747 822 aa11.11□□□□□ -0.63
CHMP3-209ENST00000494623 PQBP1O60828 265 aaKnown RBP11.11□□□□□ -0.63
CHMP3-209ENST00000494623 OR6B1O95007 311 aa11.11□□□□□ -0.63
CHMP3-209ENST00000494623 PRAMEF12O95522 483 aa11.11□□□□□ -0.63
CHMP3-209ENST00000494623 TSPAN12O95859 305 aa11.11□□□□□ -0.63
CHMP3-209ENST00000494623 RPS17P08708 135 aaKnown RBP11.11□□□□□ -0.63
CHMP3-209ENST00000494623 ETS2P15036 469 aa11.11□□□□□ -0.63
CHMP3-209ENST00000494623 ATP6V1B1P15313 513 aa11.11□□□□□ -0.63
CHMP3-209ENST00000494623 SOX11P35716 441 aa11.11□□□□□ -0.63
CHMP3-209ENST00000494623 MYBPC1Q00872 1141 aa11.11□□□□□ -0.63
CHMP3-209ENST00000494623 ATXN7L2Q5T6C5 722 aaPredicted RBP11.11□□□□□ -0.63
CHMP3-209ENST00000494623 KLHDC10Q6PID8 442 aa11.11□□□□□ -0.63
CHMP3-209ENST00000494623 NCEH1Q6PIU2 408 aa11.11□□□□□ -0.63
CHMP3-209ENST00000494623 CHST9Q7L1S5 443 aa11.11□□□□□ -0.63
CHMP3-209ENST00000494623 DEFB128Q7Z7B8 93 aa11.11□□□□□ -0.63
CHMP3-209ENST00000494623 FAM126BQ8IXS8 530 aa11.11□□□□□ -0.63
CHMP3-209ENST00000494623 SLC15A3Q8IY34 581 aa11.11□□□□□ -0.63
CHMP3-209ENST00000494623 CRIPAKQ8N1N5 446 aa11.11□□□□□ -0.63
CHMP3-209ENST00000494623 GALNT15Q8N3T1 639 aa11.11□□□□□ -0.63
CHMP3-209ENST00000494623 CD200R1Q8TD46 325 aa11.11□□□□□ -0.63
CHMP3-209ENST00000494623 VPS33AQ96AX1 596 aa11.11□□□□□ -0.63
CHMP3-209ENST00000494623 TEX37Q96LM6 180 aa11.11□□□□□ -0.63
CHMP3-209ENST00000494623 CDK15Q96Q40 435 aa11.11□□□□□ -0.63
CHMP3-209ENST00000494623 SLC29A1Q99808 456 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms