RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 CPED1A4D0V7 1026 aa4.4□□□□□ -1.71
SMC4-224ENST00000494612 ERAL1O75616 437 aaKnown RBP4.4□□□□□ -1.71
SMC4-224ENST00000494612 PGM3O95394 542 aa4.4□□□□□ -1.71
SMC4-224ENST00000494612 GLUD1P00367 558 aa4.4□□□□□ -1.71
SMC4-224ENST00000494612 HIST1H2ABP04908 130 aa4.4□□□□□ -1.71
SMC4-224ENST00000494612 MMP9P14780 707 aa4.4□□□□□ -1.71
SMC4-224ENST00000494612 ZNF12P17014 697 aa4.4□□□□□ -1.71
SMC4-224ENST00000494612 HIST1H2ADP20671 130 aa4.4□□□□□ -1.71
SMC4-224ENST00000494612 UBA1P22314 1058 aaKnown RBP4.4□□□□□ -1.71
SMC4-224ENST00000494612 TNFRSF8P28908 595 aa4.4□□□□□ -1.71
SMC4-224ENST00000494612 GLUD2P49448 558 aa4.4□□□□□ -1.71
SMC4-224ENST00000494612 HNRNPH2P55795 449 aaKnown RBP4.4□□□□□ -1.71
SMC4-224ENST00000494612 TMF1P82094 1093 aa4.4□□□□□ -1.71
SMC4-224ENST00000494612 MRPS34P82930 218 aaKnown RBP4.4□□□□□ -1.71
SMC4-224ENST00000494612 AIMP2Q13155 320 aaKnown RBP4.4□□□□□ -1.71
SMC4-224ENST00000494612 MYBPHQ13203 477 aa4.4□□□□□ -1.71
SMC4-224ENST00000494612 KCNC3Q14003 757 aa4.4□□□□□ -1.71
SMC4-224ENST00000494612 BECN1Q14457 450 aa4.4□□□□□ -1.71
SMC4-224ENST00000494612 DCST1Q5T197 706 aa4.4□□□□□ -1.71
SMC4-224ENST00000494612 FAM69BQ5VUD6 431 aa4.4□□□□□ -1.71
SMC4-224ENST00000494612 NSUN5P2Q63ZY6 315 aa4.4□□□□□ -1.71
SMC4-224ENST00000494612 HIST3H2AQ7L7L0 130 aa4.4□□□□□ -1.71
SMC4-224ENST00000494612 CACNA2D4Q7Z3S7 1137 aa4.4□□□□□ -1.71
SMC4-224ENST00000494612 GALNT5Q7Z7M9 940 aa4.4□□□□□ -1.71
SMC4-224ENST00000494612 KBTBD6Q86V97 674 aa4.4□□□□□ -1.71
SMC4-224ENST00000494612 OR8H2Q8N162 312 aa4.4□□□□□ -1.71
SMC4-224ENST00000494612 RASGEF1CQ8N431 466 aa4.4□□□□□ -1.71
SMC4-224ENST00000494612 PCDH20Q8N6Y1 951 aaKnown RBP4.4□□□□□ -1.71
SMC4-224ENST00000494612 IL17RCQ8NAC3 791 aa4.4□□□□□ -1.71
SMC4-224ENST00000494612 ACVR1CQ8NER5 493 aa4.4□□□□□ -1.71
SMC4-224ENST00000494612 OR1J2Q8NGS2 313 aa4.4□□□□□ -1.71
SMC4-224ENST00000494612 DUSP19Q8WTR2 217 aa4.4□□□□□ -1.71
SMC4-224ENST00000494612 WBP1Q96G27 269 aa4.4□□□□□ -1.71
SMC4-224ENST00000494612 SCMH1Q96GD3 660 aa4.4□□□□□ -1.71
SMC4-224ENST00000494612 FEM1CQ96JP0 617 aa4.4□□□□□ -1.71
SMC4-224ENST00000494612 FAM84BQ96KN1 310 aaPredicted RBP4.4□□□□□ -1.71
SMC4-224ENST00000494612 NUDCD1Q96RS6 583 aa4.4□□□□□ -1.71
SMC4-224ENST00000494612 MEIS3Q99687 375 aa4.4□□□□□ -1.71
SMC4-224ENST00000494612 DNAJC18Q9H819 358 aa4.4□□□□□ -1.71
SMC4-224ENST00000494612 EPB41L5Q9HCM4 733 aa4.4□□□□□ -1.71
SMC4-224ENST00000494612 SELENONQ9NZV5 590 aa4.4□□□□□ -1.71
SMC4-224ENST00000494612 STK39Q9UEW8 545 aa4.4□□□□□ -1.71
SMC4-224ENST00000494612 B3GALT5Q9Y2C3 310 aa4.4□□□□□ -1.71
SMC4-224ENST00000494612 KLHL20Q9Y2M5 609 aa4.4□□□□□ -1.71
SMC4-224ENST00000494612 LOXL2Q9Y4K0 774 aa4.4□□□□□ -1.71
SMC4-224ENST00000494612 MAGED1Q9Y5V3 778 aaPredicted RBP4.4□□□□□ -1.71
SMC4-224ENST00000494612 MRC2Q9UBG0 1479 aa4.4□□□□□ -1.71
SMC4-224ENST00000494612 OR2A25A4D2G3 310 aa4.39□□□□□ -1.71
SMC4-224ENST00000494612 SYNDIG1LA6NDD5 238 aa4.39□□□□□ -1.71
SMC4-224ENST00000494612 EIF4E1BA6NMX2 242 aaKnown RBP4.39□□□□□ -1.71
SMC4-224ENST00000494612 P4HA2O15460 535 aa4.39□□□□□ -1.71
SMC4-224ENST00000494612 SPINT2O43291 252 aa4.39□□□□□ -1.71
SMC4-224ENST00000494612 KDM4BO94953 1096 aa4.39□□□□□ -1.71
SMC4-224ENST00000494612 ZWINTO95229 277 aa4.39□□□□□ -1.71
SMC4-224ENST00000494612 ACADLP28330 430 aa4.39□□□□□ -1.71
SMC4-224ENST00000494612 HOXC9P31274 260 aa4.39□□□□□ -1.71
SMC4-224ENST00000494612 NNMTP40261 264 aa4.39□□□□□ -1.71
SMC4-224ENST00000494612 GPR143P51810 404 aa4.39□□□□□ -1.71
SMC4-224ENST00000494612 RRP1P56182 461 aaKnown RBP4.39□□□□□ -1.71
SMC4-224ENST00000494612 TAS2R38P59533 333 aa4.39□□□□□ -1.71
SMC4-224ENST00000494612 CD81P60033 236 aa4.39□□□□□ -1.71
SMC4-224ENST00000494612 MRPS5P82675 430 aaKnown RBP4.39□□□□□ -1.71
SMC4-224ENST00000494612 ZBED6P86452 979 aa4.39□□□□□ -1.71
SMC4-224ENST00000494612 ECT2LQ008S8 904 aa4.39□□□□□ -1.71
SMC4-224ENST00000494612 HLFQ16534 295 aa4.39□□□□□ -1.71
SMC4-224ENST00000494612 PPP6R3Q5H9R7 873 aaPredicted RBP4.39□□□□□ -1.71
SMC4-224ENST00000494612 TMTC2Q8N394 836 aa4.39□□□□□ -1.71
SMC4-224ENST00000494612 CLIP4Q8N3C7 705 aa4.39□□□□□ -1.71
SMC4-224ENST00000494612 APPL2Q8NEU8 664 aa4.39□□□□□ -1.71
SMC4-224ENST00000494612 SLC22A18Q96BI1 424 aa4.39□□□□□ -1.71
SMC4-224ENST00000494612 SH3GL2Q99962 352 aa4.39□□□□□ -1.71
SMC4-224ENST00000494612 SEMA3CQ99985 751 aa4.39□□□□□ -1.71
SMC4-224ENST00000494612 SLF1Q9BQI6 1058 aa4.39□□□□□ -1.71
SMC4-224ENST00000494612 MMTAG2Q9BU76 263 aaKnown RBP4.39□□□□□ -1.71
SMC4-224ENST00000494612 SEZ6LQ9BYH1 1024 aa4.39□□□□□ -1.71
SMC4-224ENST00000494612 KLHL4Q9C0H6 718 aa4.39□□□□□ -1.71
SMC4-224ENST00000494612 PLSCR4Q9NRQ2 329 aa4.39□□□□□ -1.71
SMC4-224ENST00000494612 MRPL15Q9P015 296 aaKnown RBP4.39□□□□□ -1.71
SMC4-224ENST00000494612 MALT1Q9UDY8 824 aa4.39□□□□□ -1.71
SMC4-224ENST00000494612 NRBP1Q9UHY1 535 aa4.39□□□□□ -1.71
SMC4-224ENST00000494612 FBXW11Q9UKB1 542 aa4.39□□□□□ -1.71
SMC4-224ENST00000494612 PADI3Q9ULW8 664 aa4.39□□□□□ -1.71
SMC4-224ENST00000494612 PCDHGA5Q9Y5G8 931 aa4.39□□□□□ -1.71
SMC4-224ENST00000494612 WDR62O43379 1518 aa4.39□□□□□ -1.71
SMC4-224ENST00000494612 LRRC72A6NJI9 287 aa4.38□□□□□ -1.71
SMC4-224ENST00000494612 HS3ST1O14792 307 aa4.38□□□□□ -1.71
SMC4-224ENST00000494612 ADAMDEC1O15204 470 aa4.38□□□□□ -1.71
SMC4-224ENST00000494612 MITFO75030 526 aaPredicted RBP4.38□□□□□ -1.71
SMC4-224ENST00000494612 DDX5P17844 614 aaKnown RBP4.38□□□□□ -1.71
SMC4-224ENST00000494612 APOBEC1P41238 236 aaKnown RBP4.38□□□□□ -1.71
SMC4-224ENST00000494612 PDE1BQ01064 536 aa4.38□□□□□ -1.71
SMC4-224ENST00000494612 SREBF2Q12772 1141 aa4.38□□□□□ -1.71
SMC4-224ENST00000494612 MAD2L1Q13257 205 aaPredicted RBP4.38□□□□□ -1.71
SMC4-224ENST00000494612 PCLAFQ15004 111 aa4.38□□□□□ -1.71
SMC4-224ENST00000494612 ASIC2Q16515 512 aa4.38□□□□□ -1.71
SMC4-224ENST00000494612 CCDC96Q2M329 555 aa4.38□□□□□ -1.71
SMC4-224ENST00000494612 ATP13A5Q4VNC0 1218 aa4.38□□□□□ -1.71
SMC4-224ENST00000494612 BRINP3Q76B58 766 aa4.38□□□□□ -1.71
SMC4-224ENST00000494612 ODF3L1Q8IXM7 274 aa4.38□□□□□ -1.71
SMC4-224ENST00000494612 SLC44A1Q8WWI5 657 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms