RNA–Protein interactions for RNA: ENST00000494458.1

MSH5-217, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-217ENST00000494458 ABCE1P61221 599 aaKnown RBP6.74□□□□□ -1.33
MSH5-217ENST00000494458 ATP6V0D1P61421 351 aa6.74□□□□□ -1.33
MSH5-217ENST00000494458 NAA20P61599 178 aa6.74□□□□□ -1.33
MSH5-217ENST00000494458 B4GALNT1Q00973 533 aa6.74□□□□□ -1.33
MSH5-217ENST00000494458 DPTQ07507 201 aa6.74□□□□□ -1.33
MSH5-217ENST00000494458 CAMK2GQ13555 558 aaPredicted RBP6.74□□□□□ -1.33
MSH5-217ENST00000494458 ELAVL3Q14576 367 aaKnown RBP6.74□□□□□ -1.33
MSH5-217ENST00000494458 ZNF234Q14588 700 aa6.74□□□□□ -1.33
MSH5-217ENST00000494458 ZNF460Q14592 562 aa6.74□□□□□ -1.33
MSH5-217ENST00000494458 GRIN2CQ14957 1233 aa6.74□□□□□ -1.33
MSH5-217ENST00000494458 AGERQ15109 404 aa6.74□□□□□ -1.33
MSH5-217ENST00000494458 SMAD1Q15797 465 aaKnown RBP6.74□□□□□ -1.33
MSH5-217ENST00000494458 CHRNA6Q15825 494 aa6.74□□□□□ -1.33
MSH5-217ENST00000494458 TMEM52BQ4KMG9 183 aa6.74□□□□□ -1.33
MSH5-217ENST00000494458 ZNF658BQ4V348 819 aaPredicted RBP6.74□□□□□ -1.33
MSH5-217ENST00000494458 C2orf27AQ580R0 203 aa6.74□□□□□ -1.33
MSH5-217ENST00000494458 GPRC6AQ5T6X5 926 aa6.74□□□□□ -1.33
MSH5-217ENST00000494458 LIPMQ5VYY2 423 aa6.74□□□□□ -1.33
MSH5-217ENST00000494458 LIPIQ6XZB0 460 aa6.74□□□□□ -1.33
MSH5-217ENST00000494458 CYHR1Q6ZMK1 362 aa6.74□□□□□ -1.33
MSH5-217ENST00000494458 TRPM8Q7Z2W7 1104 aa6.74□□□□□ -1.33
MSH5-217ENST00000494458 TBC1D1Q86TI0 1168 aaPredicted RBP6.74□□□□□ -1.33
MSH5-217ENST00000494458 TAX1BP1Q86VP1 789 aa6.74□□□□□ -1.33
MSH5-217ENST00000494458 SERPINA9Q86WD7 417 aa6.74□□□□□ -1.33
MSH5-217ENST00000494458 NRSN1Q8IZ57 195 aa6.74□□□□□ -1.33
MSH5-217ENST00000494458 RBFAQ8N0V3 343 aa6.74□□□□□ -1.33
MSH5-217ENST00000494458 LSMEM2Q8N112 164 aa6.74□□□□□ -1.33
MSH5-217ENST00000494458 NKAPQ8N5F7 415 aaKnown RBP6.74□□□□□ -1.33
MSH5-217ENST00000494458 GPATCH11Q8N954 259 aa6.74□□□□□ -1.33
MSH5-217ENST00000494458 CCDC63Q8NA47 563 aa6.74□□□□□ -1.33
MSH5-217ENST00000494458 TTC16Q8NEE8 873 aa6.74□□□□□ -1.33
MSH5-217ENST00000494458 GIMAP7Q8NHV1 300 aa6.74□□□□□ -1.33
MSH5-217ENST00000494458 TTC8Q8TAM2 541 aa6.74□□□□□ -1.33
MSH5-217ENST00000494458 PIWIL2Q8TC59 973 aaKnown RBP6.74□□□□□ -1.33
MSH5-217ENST00000494458 CD200R1Q8TD46 325 aa6.74□□□□□ -1.33
MSH5-217ENST00000494458 EZH1Q92800 747 aaPredicted RBP6.74□□□□□ -1.33
MSH5-217ENST00000494458 CCDC126Q96EE4 140 aa6.74□□□□□ -1.33
MSH5-217ENST00000494458 L3HYPDHQ96EM0 354 aa6.74□□□□□ -1.33
MSH5-217ENST00000494458 COQ10AQ96MF6 247 aa6.74□□□□□ -1.33
MSH5-217ENST00000494458 VPS35Q96QK1 796 aa6.74□□□□□ -1.33
MSH5-217ENST00000494458 KCNK17Q96T54 332 aa6.74□□□□□ -1.33
MSH5-217ENST00000494458 NDNQ99608 321 aa6.74□□□□□ -1.33
MSH5-217ENST00000494458 TRMT61BQ9BVS5 477 aaKnown RBP6.74□□□□□ -1.33
MSH5-217ENST00000494458 RABEP2Q9H5N1 569 aa6.74□□□□□ -1.33
MSH5-217ENST00000494458 STN1Q9H668 368 aaKnown RBP6.74□□□□□ -1.33
MSH5-217ENST00000494458 ZDHHC6Q9H6R6 413 aa6.74□□□□□ -1.33
MSH5-217ENST00000494458 FBRSL1Q9HCM7 1045 aaKnown RBP6.74□□□□□ -1.33
MSH5-217ENST00000494458 BPIFA1Q9NP55 256 aa6.74□□□□□ -1.33
MSH5-217ENST00000494458 PRSS16Q9NQE7 514 aa6.74□□□□□ -1.33
MSH5-217ENST00000494458 ZDHHC3Q9NYG2 299 aa6.74□□□□□ -1.33
MSH5-217ENST00000494458 GTSE1Q9NYZ3 720 aa6.74□□□□□ -1.33
MSH5-217ENST00000494458 GALPQ9UBC7 116 aa6.74□□□□□ -1.33
MSH5-217ENST00000494458 SLC30A1Q9Y6M5 507 aa6.74□□□□□ -1.33
MSH5-217ENST00000494458 USH1CQ9Y6N9 552 aa6.74□□□□□ -1.33
MSH5-217ENST00000494458 COL4A2P08572 1712 aa6.73□□□□□ -1.33
MSH5-217ENST00000494458 K7EQS6 105 aa6.73□□□□□ -1.33
MSH5-217ENST00000494458 AP1G1O43747 822 aa6.73□□□□□ -1.33
MSH5-217ENST00000494458 SGTAO43765 313 aa6.73□□□□□ -1.33
MSH5-217ENST00000494458 IPO13O94829 963 aaKnown RBP6.73□□□□□ -1.33
MSH5-217ENST00000494458 PYGLP06737 847 aa6.73□□□□□ -1.33
MSH5-217ENST00000494458 MYL2P10916 166 aa6.73□□□□□ -1.33
MSH5-217ENST00000494458 GLULP15104 373 aa6.73□□□□□ -1.33
MSH5-217ENST00000494458 ZNF7P17097 686 aaPredicted RBP6.73□□□□□ -1.33
MSH5-217ENST00000494458 ITGALP20701 1170 aa6.73□□□□□ -1.33
MSH5-217ENST00000494458 IMPDH1P20839 514 aa6.73□□□□□ -1.33
MSH5-217ENST00000494458 KCNA5P22460 613 aa6.73□□□□□ -1.33
MSH5-217ENST00000494458 SP100P23497 879 aaPredicted RBP6.73□□□□□ -1.33
MSH5-217ENST00000494458 GDI1P31150 447 aa6.73□□□□□ -1.33
MSH5-217ENST00000494458 FMO4P31512 558 aa6.73□□□□□ -1.33
MSH5-217ENST00000494458 IL12RB1P42701 662 aa6.73□□□□□ -1.33
MSH5-217ENST00000494458 NSG1P42857 185 aa6.73□□□□□ -1.33
MSH5-217ENST00000494458 GALK1P51570 392 aa6.73□□□□□ -1.33
MSH5-217ENST00000494458 SLC12A2P55011 1212 aa6.73□□□□□ -1.33
MSH5-217ENST00000494458 ST8SIA6P61647 398 aa6.73□□□□□ -1.33
MSH5-217ENST00000494458 BNIP1Q12981 228 aa6.73□□□□□ -1.33
MSH5-217ENST00000494458 TUBB3Q13509 450 aa6.73□□□□□ -1.33
MSH5-217ENST00000494458 ITGA9Q13797 1035 aa6.73□□□□□ -1.33
MSH5-217ENST00000494458 CSHL1Q14406 222 aa6.73□□□□□ -1.33
MSH5-217ENST00000494458 ATP13A5Q4VNC0 1218 aa6.73□□□□□ -1.33
MSH5-217ENST00000494458 CDKL4Q5MAI5 379 aa6.73□□□□□ -1.33
MSH5-217ENST00000494458 NAIF1Q69YI7 327 aaPredicted RBP6.73□□□□□ -1.33
MSH5-217ENST00000494458 UGT3A1Q6NUS8 523 aa6.73□□□□□ -1.33
MSH5-217ENST00000494458 PAQR3Q6TCH7 311 aa6.73□□□□□ -1.33
MSH5-217ENST00000494458 RFLNAQ6ZTI6 216 aa6.73□□□□□ -1.33
MSH5-217ENST00000494458 FAM47EQ6ZV65 393 aa6.73□□□□□ -1.33
MSH5-217ENST00000494458 RAPH1Q70E73 1250 aa6.73□□□□□ -1.33
MSH5-217ENST00000494458 PIWIL4Q7Z3Z4 852 aaKnown RBP6.73□□□□□ -1.33
MSH5-217ENST00000494458 HSD11B1LQ7Z5J1 315 aa6.73□□□□□ -1.33
MSH5-217ENST00000494458 SLC22A9Q8IVM8 553 aa6.73□□□□□ -1.33
MSH5-217ENST00000494458 SFTPA1Q8IWL2 248 aa6.73□□□□□ -1.33
MSH5-217ENST00000494458 TRAM1L1Q8N609 369 aa6.73□□□□□ -1.33
MSH5-217ENST00000494458 FITM2Q8N6M3 262 aa6.73□□□□□ -1.33
MSH5-217ENST00000494458 GBP7Q8N8V2 638 aaPredicted RBP6.73□□□□□ -1.33
MSH5-217ENST00000494458 TXNDC5Q8NBS9 432 aaKnown RBP6.73□□□□□ -1.33
MSH5-217ENST00000494458 DDHD1Q8NEL9 900 aa6.73□□□□□ -1.33
MSH5-217ENST00000494458 RFWD2Q8NHY2 731 aa6.73□□□□□ -1.33
MSH5-217ENST00000494458 UCMAQ8WVF2 138 aa6.73□□□□□ -1.33
MSH5-217ENST00000494458 OR8D1Q8WZ84 308 aa6.73□□□□□ -1.33
MSH5-217ENST00000494458 INPP5DQ92835 1189 aa6.73□□□□□ -1.33
MSH5-217ENST00000494458 RAB7BQ96AH8 199 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms