RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 SLC22A2O15244 555 aa13.7□□□□□ -0.22
VCP-207ENST00000493886 THRAP10827 490 aa13.7□□□□□ -0.22
VCP-207ENST00000493886 FMO4P31512 558 aa13.7□□□□□ -0.22
VCP-207ENST00000493886 RHOAP61586 193 aa13.7□□□□□ -0.22
VCP-207ENST00000493886 GALNT1Q10472 559 aaPredicted RBP13.7□□□□□ -0.22
VCP-207ENST00000493886 CEACAM7Q14002 265 aa13.7□□□□□ -0.22
VCP-207ENST00000493886 CYLC2Q14093 348 aaPredicted RBP13.7□□□□□ -0.22
VCP-207ENST00000493886 CACTIN-AS1Q8N1I8 211 aa13.7□□□□□ -0.22
VCP-207ENST00000493886 FAR2Q96K12 515 aa13.7□□□□□ -0.22
VCP-207ENST00000493886 TCF12Q99081 682 aa13.7□□□□□ -0.22
VCP-207ENST00000493886 GSTO2Q9H4Y5 243 aa13.7□□□□□ -0.22
VCP-207ENST00000493886 TNFRSF12AQ9NP84 129 aa13.7□□□□□ -0.22
VCP-207ENST00000493886 POLR3BQ9NW08 1133 aaPredicted RBP13.7□□□□□ -0.22
VCP-207ENST00000493886 FCF1Q9Y324 198 aaKnown RBP13.7□□□□□ -0.22
VCP-207ENST00000493886 OBSL1O75147 1896 aa13.69□□□□□ -0.22
VCP-207ENST00000493886 CARNS1A5YM72 827 aa13.69□□□□□ -0.22
VCP-207ENST00000493886 LILRB3O75022 631 aa13.69□□□□□ -0.22
VCP-207ENST00000493886 NDUFS3O75489 264 aa13.69□□□□□ -0.22
VCP-207ENST00000493886 RHOBTB1O94844 696 aa13.69□□□□□ -0.22
VCP-207ENST00000493886 CSPG5O95196 566 aa13.69□□□□□ -0.22
VCP-207ENST00000493886 PENKP01210 267 aaPredicted RBP13.69□□□□□ -0.22
VCP-207ENST00000493886 GABRR2P28476 465 aa13.69□□□□□ -0.22
VCP-207ENST00000493886 CYP4F8P98187 520 aa13.69□□□□□ -0.22
VCP-207ENST00000493886 NFKB2Q00653 900 aa13.69□□□□□ -0.22
VCP-207ENST00000493886 ZNF678Q5SXM1 525 aa13.69□□□□□ -0.22
VCP-207ENST00000493886 AFAP1L2Q8N4X5 818 aa13.69□□□□□ -0.22
VCP-207ENST00000493886 EXT2Q93063 718 aa13.69□□□□□ -0.22
VCP-207ENST00000493886 L3HYPDHQ96EM0 354 aa13.69□□□□□ -0.22
VCP-207ENST00000493886 ALG14Q96F25 216 aa13.69□□□□□ -0.22
VCP-207ENST00000493886 YME1L1Q96TA2 773 aa13.69□□□□□ -0.22
VCP-207ENST00000493886 BEGAINQ9BUH8 593 aa13.69□□□□□ -0.22
VCP-207ENST00000493886 FAM192AQ9GZU8 254 aa13.69□□□□□ -0.22
VCP-207ENST00000493886 CCDC68Q9H2F9 335 aa13.69□□□□□ -0.22
VCP-207ENST00000493886 PCDH10Q9P2E7 1040 aa13.69□□□□□ -0.22
VCP-207ENST00000493886 FKBPLQ9UIM3 349 aa13.69□□□□□ -0.22
VCP-207ENST00000493886 PRELID1Q9Y255 219 aa13.69□□□□□ -0.22
VCP-207ENST00000493886 ANKRD12Q6UB98 2062 aa13.69□□□□□ -0.22
VCP-207ENST00000493886 CCDC160A6NGH7 325 aa13.69□□□□□ -0.22
VCP-207ENST00000493886 SRP72O76094 671 aaKnown RBP13.69□□□□□ -0.22
VCP-207ENST00000493886 SUPT7LO94864 414 aa13.69□□□□□ -0.22
VCP-207ENST00000493886 ADSLP30566 484 aaPredicted RBP13.69□□□□□ -0.22
VCP-207ENST00000493886 PPM1AP35813 382 aa13.69□□□□□ -0.22
VCP-207ENST00000493886 CDKN1CP49918 316 aaPredicted RBP13.69□□□□□ -0.22
VCP-207ENST00000493886 PTPRRQ15256 657 aa13.69□□□□□ -0.22
VCP-207ENST00000493886 GK5Q6ZS86 529 aa13.69□□□□□ -0.22
VCP-207ENST00000493886 SPATA24Q86W54 205 aa13.69□□□□□ -0.22
VCP-207ENST00000493886 PCDH20Q8N6Y1 951 aaKnown RBP13.69□□□□□ -0.22
VCP-207ENST00000493886 CEP70Q8NHQ1 597 aa13.69□□□□□ -0.22
VCP-207ENST00000493886 DTNBP1Q96EV8 351 aa13.69□□□□□ -0.22
VCP-207ENST00000493886 LRGUKQ96M69 825 aa13.69□□□□□ -0.22
VCP-207ENST00000493886 TRMOQ9BU70 441 aa13.69□□□□□ -0.22
VCP-207ENST00000493886 ZDHHC7Q9NXF8 308 aa13.69□□□□□ -0.22
VCP-207ENST00000493886 TAS2R13Q9NYV9 303 aa13.69□□□□□ -0.22
VCP-207ENST00000493886 STK39Q9UEW8 545 aa13.69□□□□□ -0.22
VCP-207ENST00000493886 MED16Q9Y2X0 877 aa13.69□□□□□ -0.22
VCP-207ENST00000493886 H3BMM5 538 aa13.68□□□□□ -0.22
VCP-207ENST00000493886 STX7O15400 261 aaKnown RBP13.68□□□□□ -0.22
VCP-207ENST00000493886 TIMP1P01033 207 aa13.68□□□□□ -0.22
VCP-207ENST00000493886 ACRP10323 421 aa13.68□□□□□ -0.22
VCP-207ENST00000493886 MC4RP32245 332 aa13.68□□□□□ -0.22
VCP-207ENST00000493886 ART3Q13508 389 aa13.68□□□□□ -0.22
VCP-207ENST00000493886 OR4D1Q15615 310 aa13.68□□□□□ -0.22
VCP-207ENST00000493886 LRRC26Q2I0M4 334 aa13.68□□□□□ -0.22
VCP-207ENST00000493886 ATXN7L2Q5T6C5 722 aaPredicted RBP13.68□□□□□ -0.22
VCP-207ENST00000493886 GAREM2Q75VX8 874 aa13.68□□□□□ -0.22
VCP-207ENST00000493886 FAM217AQ8IXS0 508 aa13.68□□□□□ -0.22
VCP-207ENST00000493886 PEX5LQ8IYB4 626 aa13.68□□□□□ -0.22
VCP-207ENST00000493886 SLC7A5P1Q8MH63 180 aa13.68□□□□□ -0.22
VCP-207ENST00000493886 LILRA2Q8N149 483 aa13.68□□□□□ -0.22
VCP-207ENST00000493886 DCAF4L2Q8NA75 395 aa13.68□□□□□ -0.22
VCP-207ENST00000493886 RP9Q8TA86 221 aaKnown RBP13.68□□□□□ -0.22
VCP-207ENST00000493886 PIP4K2CQ8TBX8 421 aa13.68□□□□□ -0.22
VCP-207ENST00000493886 WDR41Q9HAD4 459 aa13.68□□□□□ -0.22
VCP-207ENST00000493886 SYTL2Q9HCH5 934 aa13.68□□□□□ -0.22
VCP-207ENST00000493886 BPIFA1Q9NP55 256 aa13.68□□□□□ -0.22
VCP-207ENST00000493886 DNMT3BQ9UBC3 853 aaKnown RBP13.68□□□□□ -0.22
VCP-207ENST00000493886 PSMD13Q9UNM6 376 aa13.68□□□□□ -0.22
VCP-207ENST00000493886 FAM50BQ9Y247 325 aa13.68□□□□□ -0.22
VCP-207ENST00000493886 TGM5O43548 720 aa13.68□□□□□ -0.22
VCP-207ENST00000493886 CNPP09543 421 aaKnown RBP13.68□□□□□ -0.22
VCP-207ENST00000493886 CHN2P52757 468 aa13.68□□□□□ -0.22
VCP-207ENST00000493886 HERVK_113P63132 956 aa13.68□□□□□ -0.22
VCP-207ENST00000493886 SETMARQ53H47 684 aaPredicted RBP13.68□□□□□ -0.22
VCP-207ENST00000493886 UNC50Q53HI1 259 aa13.68□□□□□ -0.22
VCP-207ENST00000493886 C6orf52Q5T4I8 152 aa13.68□□□□□ -0.22
VCP-207ENST00000493886 PSAPL1Q6NUJ1 521 aa13.68□□□□□ -0.22
VCP-207ENST00000493886 IYDQ6PHW0 289 aa13.68□□□□□ -0.22
VCP-207ENST00000493886 PAQR3Q6TCH7 311 aa13.68□□□□□ -0.22
VCP-207ENST00000493886 PIANPQ8IYJ0 282 aa13.68□□□□□ -0.22
VCP-207ENST00000493886 RHEBL1Q8TAI7 183 aa13.68□□□□□ -0.22
VCP-207ENST00000493886 MRPS31Q92665 395 aaKnown RBP13.68□□□□□ -0.22
VCP-207ENST00000493886 ERVK-6Q9BXR3 956 aa13.68□□□□□ -0.22
VCP-207ENST00000493886 ZBP1Q9H171 429 aa13.68□□□□□ -0.22
VCP-207ENST00000493886 TFB2MQ9H5Q4 396 aaKnown RBP13.68□□□□□ -0.22
VCP-207ENST00000493886 MRGBPQ9NV56 204 aa13.68□□□□□ -0.22
VCP-207ENST00000493886 ADA2Q9NZK5 511 aa13.68□□□□□ -0.22
VCP-207ENST00000493886 LSM7Q9UK45 103 aaKnown RBP13.68□□□□□ -0.22
VCP-207ENST00000493886 PCDHB9Q9Y5E1 797 aa13.68□□□□□ -0.22
VCP-207ENST00000493886 A0A0U1RQS6 177 aa13.67□□□□□ -0.22
VCP-207ENST00000493886 TRIM43BA6NCK2 446 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms