RNA–Protein interactions for RNA: ENST00000493582.5

HDAC4-210, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,188 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-210ENST00000493582 NME7Q9Y5B8 376 aa11.64□□□□□ -0.55
HDAC4-210ENST00000493582 SSX4O60224 188 aa11.63□□□□□ -0.55
HDAC4-210ENST00000493582 MAFO75444 373 aaPredicted RBP11.63□□□□□ -0.55
HDAC4-210ENST00000493582 ABCB1P08183 1280 aaPredicted RBP11.63□□□□□ -0.55
HDAC4-210ENST00000493582 ADORA2BP29275 332 aa11.63□□□□□ -0.55
HDAC4-210ENST00000493582 CD6P30203 668 aa11.63□□□□□ -0.55
HDAC4-210ENST00000493582 SULT1E1P49888 294 aa11.63□□□□□ -0.55
HDAC4-210ENST00000493582 CLCNKBP51801 687 aa11.63□□□□□ -0.55
HDAC4-210ENST00000493582 GABARAPL2P60520 117 aa11.63□□□□□ -0.55
HDAC4-210ENST00000493582 TNFAIP2Q03169 654 aa11.63□□□□□ -0.55
HDAC4-210ENST00000493582 CHRNEQ04844 493 aa11.63□□□□□ -0.55
HDAC4-210ENST00000493582 ARHGAP17Q68EM7 881 aa11.63□□□□□ -0.55
HDAC4-210ENST00000493582 BEND5Q7L4P6 421 aa11.63□□□□□ -0.55
HDAC4-210ENST00000493582 SYTL1Q8IYJ3 562 aa11.63□□□□□ -0.55
HDAC4-210ENST00000493582 SLC38A6Q8IZM9 456 aa11.63□□□□□ -0.55
HDAC4-210ENST00000493582 DEFB106AQ8N104 65 aa11.63□□□□□ -0.55
HDAC4-210ENST00000493582 FAM86B1Q8N7N1 296 aa11.63□□□□□ -0.55
HDAC4-210ENST00000493582 MCOLN3Q8TDD5 553 aa11.63□□□□□ -0.55
HDAC4-210ENST00000493582 FRS2Q8WU20 508 aa11.63□□□□□ -0.55
HDAC4-210ENST00000493582 DMRTB1Q96MA1 342 aa11.63□□□□□ -0.55
HDAC4-210ENST00000493582 NSMCE2Q96MF7 247 aa11.63□□□□□ -0.55
HDAC4-210ENST00000493582 RHNO1Q9BSD3 238 aa11.63□□□□□ -0.55
HDAC4-210ENST00000493582 KIFC1Q9BW19 673 aa11.63□□□□□ -0.55
HDAC4-210ENST00000493582 TRIM54Q9BYV2 358 aa11.63□□□□□ -0.55
HDAC4-210ENST00000493582 ADPRHL2Q9NX46 363 aa11.63□□□□□ -0.55
HDAC4-210ENST00000493582 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.63□□□□□ -0.55
HDAC4-210ENST00000493582 UTS2RQ9UKP6 389 aa11.63□□□□□ -0.55
HDAC4-210ENST00000493582 INTS6Q9UL03 887 aaKnown RBP11.63□□□□□ -0.55
HDAC4-210ENST00000493582 ISPDA4D126 451 aa11.63□□□□□ -0.55
HDAC4-210ENST00000493582 UBXN8O00124 270 aa11.63□□□□□ -0.55
HDAC4-210ENST00000493582 EEF2KO00418 725 aaKnown RBP11.63□□□□□ -0.55
HDAC4-210ENST00000493582 ICMTO60725 284 aa11.63□□□□□ -0.55
HDAC4-210ENST00000493582 USP2O75604 605 aaPredicted RBP11.63□□□□□ -0.55
HDAC4-210ENST00000493582 ALX3O95076 343 aa11.63□□□□□ -0.55
HDAC4-210ENST00000493582 SIX3O95343 332 aaPredicted RBP11.63□□□□□ -0.55
HDAC4-210ENST00000493582 JCHAINP01591 159 aa11.63□□□□□ -0.55
HDAC4-210ENST00000493582 ASNSP08243 561 aa11.63□□□□□ -0.55
HDAC4-210ENST00000493582 MYL3P08590 195 aa11.63□□□□□ -0.55
HDAC4-210ENST00000493582 IQCF3P0C7M6 154 aa11.63□□□□□ -0.55
HDAC4-210ENST00000493582 CPB1P15086 417 aa11.63□□□□□ -0.55
HDAC4-210ENST00000493582 ERCC2P18074 760 aa11.63□□□□□ -0.55
HDAC4-210ENST00000493582 POLD2P49005 469 aa11.63□□□□□ -0.55
HDAC4-210ENST00000493582 AMHR2Q16671 573 aa11.63□□□□□ -0.55
HDAC4-210ENST00000493582 GDPD3Q7L5L3 318 aa11.63□□□□□ -0.55
HDAC4-210ENST00000493582 PLD3Q8IV08 490 aa11.63□□□□□ -0.55
HDAC4-210ENST00000493582 CLYBLQ8N0X4 340 aa11.63□□□□□ -0.55
HDAC4-210ENST00000493582 SLC10A4Q96EP9 437 aa11.63□□□□□ -0.55
HDAC4-210ENST00000493582 ZNF560Q96MR9 790 aa11.63□□□□□ -0.55
HDAC4-210ENST00000493582 C6orf62Q9GZU0 229 aaPredicted RBP11.63□□□□□ -0.55
HDAC4-210ENST00000493582 TRIM39Q9HCM9 518 aa11.63□□□□□ -0.55
HDAC4-210ENST00000493582 SDR39U1Q9NRG7 319 aaPredicted RBP11.63□□□□□ -0.55
HDAC4-210ENST00000493582 PLSCR3Q9NRY6 295 aa11.63□□□□□ -0.55
HDAC4-210ENST00000493582 A0A087X1B8 175 aa11.63□□□□□ -0.55
HDAC4-210ENST00000493582 LOC105371267A0A1B0GV96 52 aa11.63□□□□□ -0.55
HDAC4-210ENST00000493582 ZSCAN5BA6NJL1 495 aa11.63□□□□□ -0.55
HDAC4-210ENST00000493582 CRYZL1O95825 349 aa11.63□□□□□ -0.55
HDAC4-210ENST00000493582 FMO3P31513 532 aa11.63□□□□□ -0.55
HDAC4-210ENST00000493582 CRY1Q16526 586 aa11.63□□□□□ -0.55
HDAC4-210ENST00000493582 ATAD3CQ5T2N8 411 aa11.63□□□□□ -0.55
HDAC4-210ENST00000493582 SULT1C3Q6IMI6 304 aa11.63□□□□□ -0.55
HDAC4-210ENST00000493582 METTL4Q8N3J2 472 aa11.63□□□□□ -0.55
HDAC4-210ENST00000493582 SVOPQ8N4V2 548 aa11.63□□□□□ -0.55
HDAC4-210ENST00000493582 NPWQ8N729 165 aa11.63□□□□□ -0.55
HDAC4-210ENST00000493582 TWIST2Q8WVJ9 160 aa11.63□□□□□ -0.55
HDAC4-210ENST00000493582 LPAR1Q92633 364 aa11.63□□□□□ -0.55
HDAC4-210ENST00000493582 YIPF6Q96EC8 236 aa11.63□□□□□ -0.55
HDAC4-210ENST00000493582 PPP1R16BQ96T49 567 aa11.63□□□□□ -0.55
HDAC4-210ENST00000493582 TMEM246Q9BRR3 403 aa11.63□□□□□ -0.55
HDAC4-210ENST00000493582 FEM1AQ9BSK4 669 aa11.63□□□□□ -0.55
HDAC4-210ENST00000493582 TUBB1Q9H4B7 451 aa11.63□□□□□ -0.55
HDAC4-210ENST00000493582 MID1IP1Q9NPA3 183 aa11.63□□□□□ -0.55
HDAC4-210ENST00000493582 NRBP2Q9NSY0 501 aa11.63□□□□□ -0.55
HDAC4-210ENST00000493582 SNTG2Q9NY99 539 aa11.63□□□□□ -0.55
HDAC4-210ENST00000493582 ZNF70Q9UC06 446 aaPredicted RBP11.63□□□□□ -0.55
HDAC4-210ENST00000493582 ZNF221Q9UK13 617 aa11.63□□□□□ -0.55
HDAC4-210ENST00000493582 FBXO10Q9UK96 956 aa11.63□□□□□ -0.55
HDAC4-210ENST00000493582 KIAA1257Q9ULG3 409 aa11.63□□□□□ -0.55
HDAC4-210ENST00000493582 LOC100130705A0A1B0GUX0 176 aa11.62□□□□□ -0.55
HDAC4-210ENST00000493582 A0A1W2PP18 115 aa11.62□□□□□ -0.55
HDAC4-210ENST00000493582 MT-CYBP00156 380 aaPredicted RBP11.62□□□□□ -0.55
HDAC4-210ENST00000493582 FYNP06241 537 aa11.62□□□□□ -0.55
HDAC4-210ENST00000493582 IMPDH1P20839 514 aa11.62□□□□□ -0.55
HDAC4-210ENST00000493582 STAT5BP51692 787 aa11.62□□□□□ -0.55
HDAC4-210ENST00000493582 KPNA2P52292 529 aaKnown RBP11.62□□□□□ -0.55
HDAC4-210ENST00000493582 PLIN5Q00G26 463 aa11.62□□□□□ -0.55
HDAC4-210ENST00000493582 PAFAH1B3Q15102 231 aaKnown RBP11.62□□□□□ -0.55
HDAC4-210ENST00000493582 UNC50Q53HI1 259 aa11.62□□□□□ -0.55
HDAC4-210ENST00000493582 AGAP9Q5VTM2 703 aa11.62□□□□□ -0.55
HDAC4-210ENST00000493582 PKN3Q6P5Z2 889 aa11.62□□□□□ -0.55
HDAC4-210ENST00000493582 SPESP1Q6UW49 350 aa11.62□□□□□ -0.55
HDAC4-210ENST00000493582 DEPDC4Q8N2C3 294 aa11.62□□□□□ -0.55
HDAC4-210ENST00000493582 OR6F1Q8NGZ6 308 aa11.62□□□□□ -0.55
HDAC4-210ENST00000493582 HCAR2Q8TDS4 363 aa11.62□□□□□ -0.55
HDAC4-210ENST00000493582 PROX1Q92786 737 aa11.62□□□□□ -0.55
HDAC4-210ENST00000493582 CCDC126Q96EE4 140 aa11.62□□□□□ -0.55
HDAC4-210ENST00000493582 CDHR1Q96JP9 859 aa11.62□□□□□ -0.55
HDAC4-210ENST00000493582 HSFY1Q96LI6 401 aa11.62□□□□□ -0.55
HDAC4-210ENST00000493582 DPEP3Q9H4B8 488 aa11.62□□□□□ -0.55
HDAC4-210ENST00000493582 CCDC154A6NI56 674 aa11.62□□□□□ -0.55
HDAC4-210ENST00000493582 PDZK1P1A8MUH7 402 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms